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IVF0026782 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026782
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyubiquitin-like
Genome locationchr06:20905615..20906061
RNA-Seq ExpressionIVF0026782
SyntenyIVF0026782
Gene Ontology termsGO:1902255 - positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator (biological process)
GO:1901214 - regulation of neuron death (biological process)
GO:0061136 - regulation of proteasomal protein catabolic process (biological process)
GO:0008406 - gonad development (biological process)
GO:0051881 - regulation of mitochondrial membrane potential (biological process)
GO:0019941 - modification-dependent protein catabolic process (biological process)
GO:0047497 - mitochondrion transport along microtubule (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0031315 - extrinsic component of mitochondrial outer membrane (cellular component)
GO:0043025 - neuronal cell body (cellular component)
GO:0030666 - endocytic vesicle membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR019956 - Ubiquitin domain
IPR000626 - Ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025481.1 polyubiquitin-like [Cucumis melo var. makuwa]2.52e-99100Show/hide
Query:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
        MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
Subjt:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV

Query:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
        KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
Subjt:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC

KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]9.53e-6368.92Show/hide
Query:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
        MATDQYT L NNGDM IKLAAIEAVQAL DI EDL FEAFDFLEK+ +AKMF+A+N NLRS+WLRRKLW    +I +  + G  I + VS FITI+ELKV
Subjt:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV

Query:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
        KLYEK+ Y PTKV  I AGK LE+GRSLSDYNI DG  IH + R+CGC
Subjt:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]4.58e-2140.94Show/hide
Query:  IEAVQALSDIDEDLFFEAFDFL-EKKNNAKMFIAMNANLRSRWLRRKLW-SPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG
        I+AV+AL D+DEDL  +AFDFL + +N AK+FI+M+A LR +WL +KL   P M+I +KT+ G+ + + V    TI ++K K+  KE Y   + R +  G
Subjt:  IEAVQALSDIDEDLFFEAFDFL-EKKNNAKMFIAMNANLRSRWLRRKLW-SPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG

Query:  KELENGRSLSDYNITDGSTIHTLFRVC
         +L++ R+L    +  GS++H +  VC
Subjt:  KELENGRSLSDYNITDGSTIHTLFRVC

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]6.12e-2945.38Show/hide
Query:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKL-WSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICA
        A I+AVQAL D+DEDL  +A DF +   N ++F+A++  LR RWL R L  S  M+I +K + GKT+  ++ A  TI+ +K K+   E Y P + R I  
Subjt:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKL-WSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICA

Query:  GKELENGRSLSDYNITDGSTIHTLFRVCGC
        G++LE+GR+L++YNI  GST+H + R+CGC
Subjt:  GKELENGRSLSDYNITDGSTIHTLFRVCGC

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]4.66e-2844.96Show/hide
Query:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG
        A I+AVQAL D+DEDL  +A DF +   N ++F+A++  LR RWL R L   S +I +K + GKT+  ++ A  TI+ +K K+   E Y P + R I  G
Subjt:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG

Query:  KELENGRSLSDYNITDGSTIHTLFRVCGC
        ++LE+GR+L++YNI  GST+H + R+CGC
Subjt:  KELENGRSLSDYNITDGSTIHTLFRVCGC

TrEMBL top hitse value%identityAlignment
A0A0A0L2G3 Ubiquitin-like domain-containing protein2.5e-2768Show/hide
Query:  MFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGR--SLSDYNITDGSTIHTLFRVCGC
        MFIAMNANLRSRWLRRKLW    +I +K   G TI +KVS FI  + LKVKLYEKE YLP+ +RFI AGK LE+GR  SLSDYNITDGSTI    R+CGC
Subjt:  MFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGR--SLSDYNITDGSTIHTLFRVCGC

A0A5A7SML9 Polyubiquitin-like2.9e-76100Show/hide
Query:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
        MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
Subjt:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV

Query:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
        KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
Subjt:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC

A0A5D3BQI8 Polyubiquitin-like1.9e-4868.92Show/hide
Query:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV
        MATDQYT L NNGDM IKLAAIEAVQAL DI EDL FEAFDFLEK+ +AKMF+A+N NLRS+WLRRKLW    +I +  + G  I + VS FITI+ELKV
Subjt:  MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKV

Query:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC
        KLYEK+ Y PTKV  I AGK LE+GRSLSDYNI DG  IH + R+CGC
Subjt:  KLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC

A0A6J1DL46 ubiquitin-like isoform X12.4e-2245.38Show/hide
Query:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKL-WSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICA
        A I+AVQAL D+DEDL  +A DF +   N ++F+A++  LR RWL R L  S  M+I +K + GKT+  ++ A  TI+ +K K+   E Y P + R I  
Subjt:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKL-WSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICA

Query:  GKELENGRSLSDYNITDGSTIHTLFRVCGC
        G++LE+GR+L++YNI  GST+H + R+CGC
Subjt:  GKELENGRSLSDYNITDGSTIHTLFRVCGC

A0A6J1DN50 ubiquitin-like isoform X29.1e-2244.96Show/hide
Query:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG
        A I+AVQAL D+DEDL  +A DF +   N ++F+A++  LR RWL R L   S +I +K + GKT+  ++ A  TI+ +K K+   E Y P + R I  G
Subjt:  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAG

Query:  KELENGRSLSDYNITDGSTIHTLFRVCGC
        ++LE+GR+L++YNI  GST+H + R+CGC
Subjt:  KELENGRSLSDYNITDGSTIHTLFRVCGC

SwissProt top hitse value%identityAlignment
P0CG71 Polyubiquitin-A4.4e-1350.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V A  TIE +K K+ +KE   P + R I AGK+LE+GR+LSDYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

P49632 Ubiquitin-60S ribosomal protein L405.7e-1350.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V A  TIE +K K+ +KE   P + R I AGK+LE+GR+LSDYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

P59669 Polyubiquitin5.7e-1350.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V A  TIE +K K+ +KE   P + R I AGK+LE+GR+LSDYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

Q39256 Polyubiquitin 81.1e-1348Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I ++T+ GKTI ++V +  TI+ +K K+ +KE  LP + R I AGK+LE+GR+L+DYNI   ST+H + R+CG
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

Q8MKD1 Polyubiquitin-B4.4e-1350.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V    TIE +K K+ +KE   P + RFI AGK+LE+GR+LSDYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein4.5e-1346.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V +  TI+ +K K+ +KE   P + R I AGK+LE+GR+L+DYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

AT1G31340.1 related to ubiquitin 14.5e-1346.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V +  TI+ +K K+ +KE   P + R I AGK+LE+GR+L+DYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

AT1G55060.1 ubiquitin 122.0e-1348Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V +  TI+ LK K+ +KE   P + R I AGK+LE+GR+L+DYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

AT1G65350.1 ubiquitin 134.5e-1346.67Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I +KT+ GKTI ++V +  TI+ +K K+ +KE   P + R I AGK+LE+GR+L+DYNI   ST+H + R+ G
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG

AT3G09790.1 ubiquitin 88.2e-1548Show/hide
Query:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG
        M+I ++T+ GKTI ++V +  TI+ +K K+ +KE  LP + R I AGK+LE+GR+L+DYNI   ST+H + R+CG
Subjt:  MKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGATCAATATACTTTATTGAACAATAATGGTGATATGCCAATTAAATTAGCAGCCATTGAAGCTGTCCAGGCATTATCAGACATCGACGAAGACCTATTTTT
TGAAGCCTTTGATTTTCTTGAGAAGAAAAATAATGCCAAAATGTTTATTGCAATGAATGCAAACTTACGAAGTAGGTGGTTGAGGAGAAAGTTGTGGTCACCGTCGATGA
AAATCTTACTGAAAACAATATATGGCAAGACAATAGTAGTCAAAGTTTCCGCGTTCATCACAATTGAGGAATTGAAAGTTAAACTCTATGAAAAGGAAGCATATCTTCCA
ACCAAAGTTAGATTCATTTGTGCTGGAAAGGAGCTTGAAAATGGAAGAAGTCTATCAGACTACAACATAACTGATGGTTCCACTATTCATACTCTCTTTAGAGTATGTGG
CTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGATCAATATACTTTATTGAACAATAATGGTGATATGCCAATTAAATTAGCAGCCATTGAAGCTGTCCAGGCATTATCAGACATCGACGAAGACCTATTTTT
TGAAGCCTTTGATTTTCTTGAGAAGAAAAATAATGCCAAAATGTTTATTGCAATGAATGCAAACTTACGAAGTAGGTGGTTGAGGAGAAAGTTGTGGTCACCGTCGATGA
AAATCTTACTGAAAACAATATATGGCAAGACAATAGTAGTCAAAGTTTCCGCGTTCATCACAATTGAGGAATTGAAAGTTAAACTCTATGAAAAGGAAGCATATCTTCCA
ACCAAAGTTAGATTCATTTGTGCTGGAAAGGAGCTTGAAAATGGAAGAAGTCTATCAGACTACAACATAACTGATGGTTCCACTATTCATACTCTCTTTAGAGTATGTGG
CTGTTAA
Protein sequenceShow/hide protein sequence
MATDQYTLLNNNGDMPIKLAAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPSMKILLKTIYGKTIVVKVSAFITIEELKVKLYEKEAYLP
TKVRFICAGKELENGRSLSDYNITDGSTIHTLFRVCGC