| GenBank top hits | e value | %identity | Alignment |
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| KAA0043826.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.76e-115 | 83.87 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNV YVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKLKGTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKH TKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 4.56e-115 | 83.41 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVT+M MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL Y+HS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.17e-116 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 3.87e-117 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 9.62e-116 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TP18 Putative gag-pol polyprotein | 3.1e-98 | 83.87 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNV YVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKLKGTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKH TKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.1e-98 | 83.41 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVT+M MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL Y+HS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| A0A5A7UB25 Putative gag-pol polyprotein | 2.2e-99 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| A0A5D3CTV2 Putative polyprotein | 2.2e-99 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| A0A5D3DNU1 Putative gag-pol polyprotein | 2.2e-99 | 84.33 | Show/hide |
Query: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
++DFL NFQK D K+LLGDNGT VK TGS+QIATHD ++ILTNVRYVP+LKRNLIS+ EL+RSGCTIKS+N VMK TKGS VKL+GTLRHGLYVLEG
Subjt: NQDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEG
Query: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
T+VSGSAAIASGKVTDM MLWHKRLAHVSERGLQALSQQGLLGGVK+VELPFCEHCIMGKSTRVKFGKGKHTTKGIL YVHS+LWGPTKE SMG SR FI
Subjt: TSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFI
Query: SIIDDFLRKVWMYPLKQ
SIIDDF RKVW+YPLKQ
Subjt: SIIDDFLRKVWMYPLKQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-28 | 33.95 | Show/hide |
Query: QDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEGT
+D + D + +G+ + G I I T+ +L +VR+VP+L+ NLIS L+R G N+ + TKGS V KG R LY
Subjt: QDFLINFQKSDVRKILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISELNRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEGT
Query: SVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFIS
G A +++ LWHKR+ H+SE+GLQ L+++ L+ K + C++C+ GK RV F IL V+S++ GP + SMG ++ F++
Subjt: SVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFIS
Query: IIDDFLRKVWMYPLK
IDD RK+W+Y LK
Subjt: IIDDFLRKVWMYPLK
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 4.6e-22 | 46.85 | Show/hide |
Query: VMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKG
V+K KG + LKG LY+L+G+ +G + +A D LWH RLAH+S+RG++ L ++G L K L FCE CI GK+ RV F G+HTTK
Subjt: VMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASGKVTDMPMLWHKRLAHVSERGLQALSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKG
Query: ILYYVHSNLWG
L YVHS+LWG
Subjt: ILYYVHSNLWG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.3e-15 | 27.67 | Show/hide |
Query: ILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISEL-NRSGCTIK--SKNRVMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASG
+++ D T + TGS ++T R + L N+ YVP + +NLIS+ L N +G +++ + +KD L+G + LY S + AS
Subjt: ILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISEL-NRSGCTIK--SKNRVMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASG
Query: KVTDMPMLWHKRLAHVSERGLQA-LSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFISIIDDFLRKVW
WH RL H + L + +S L + C C++ KS +V F + + L Y++S++W + S R ++ +D F R W
Subjt: KVTDMPMLWHKRLAHVSERGLQA-LSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFISIIDDFLRKVW
Query: MYPLKQ
+YPLKQ
Subjt: MYPLKQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-15 | 29.13 | Show/hide |
Query: ILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISEL---NRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASG
+++ D T + TGS + T R + L V YVP + +NLIS+ L NR + +KD L+G + LY S + AS
Subjt: ILLGDNGTYGVKETGSIQIATHDRRIKILTNVRYVPELKRNLISISEL---NRSGCTIKSKNRVMKDTKGSQVKLKGTLRHGLYVLEGTSVSGSAAIASG
Query: KVTDMPMLWHKRLAHVSERGLQA-LSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFISIIDDFLRKVW
WH RL H S L + +S L +L C C + KS +V F T+ L Y++S++W + S+ R ++ +D F R W
Subjt: KVTDMPMLWHKRLAHVSERGLQA-LSQQGLLGGVKDVELPFCEHCIMGKSTRVKFGKGKHTTKGILYYVHSNLWGPTKETSMGVSRCFISIIDDFLRKVW
Query: MYPLKQ
+YPLKQ
Subjt: MYPLKQ
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