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IVF0026804 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026804
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosynthetic NDH subunit of subcomplex B 3
Genome locationchr07:8983754..8984574
RNA-Seq ExpressionIVF0026804
SyntenyIVF0026804
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02519.1 26S protease regulatory subunit 8-like protein B-like [Cucumis melo var. makuwa]1.80e-1078.26Show/hide
Query:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLV
        + +VS  ATL +SFL YLDELSNE KF VSKGFLLLRVNEVITMLV
Subjt:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLV
TYK27600.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]1.23e-1077.08Show/hide
Query:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
        D ++   ATLA+SFL YLDELSN NKF VSKGFLLLRVNEVITMLV+M
Subjt:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
TrEMBL top hitse value%identityAlignment
A0A5D3BWM3 26S protease regulatory subunit 8-like protein B-like6.0e-0875Show/hide
Query:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
        + +VS  ATL +SFL YLDELSNE KF VSKGFLLLRVNEVITMLV++
Subjt:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
A0A5D3DWD6 Photosynthetic NDH subunit of subcomplex B 37.8e-0877.08Show/hide
Query:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
        D ++   ATLA+SFL YLDELSN NKF VSKGFLLLRVNEVITMLV+M
Subjt:  DTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGTCACCGCGACACAGTTGTGTCGTCCTCCGCTACTTTGGCTAATTCCTTTCTAATATATCTTGATGAACTCTCTAATGAAAACAAGTTTTTGGTTTCTAAAGG
CTTTTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTCTTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGTCACCGCGACACAGTTGTGTCGTCCTCCGCTACTTTGGCTAATTCCTTTCTAATATATCTTGATGAACTCTCTAATGAAAACAAGTTTTTGGTTTCTAAAGG
CTTTTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTCTTATGTAA
Protein sequenceShow/hide protein sequence
MNSHRDTVVSSSATLANSFLIYLDELSNENKFLVSKGFLLLRVNEVITMLVLM