; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026828 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026828
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease H
Genome locationchr06:19298684..19299670
RNA-Seq ExpressionIVF0026828
SyntenyIVF0026828
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036934.1 uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa]1.30e-22192.75Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVA DMSIKKLKVLGDSMLVIHQVKEEWE RDAKLVPYS YVTKLSQNFEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFDIK    CRE+PY+ASEN+KRTI+RLAMNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGH FILVAIDYFTKWIEAASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IITDNAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

KAA0036943.1 uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa]1.43e-22892.75Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYS YVTKLSQ FEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFDIK    CRE+PY+ASEN+KRTI+RLAMNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYARECKKCQIYMDKIHVAAS LHILSAPWPFSLWGMDVIGPIDPKASNGH FILVAIDYFTKWIEAASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IITDNAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

KAA0046905.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]8.52e-253100Show/hide
Query:  MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN
        MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN
Subjt:  MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN

Query:  PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR
        PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR
Subjt:  PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR

Query:  HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV
        HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV
Subjt:  HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV

Query:  LKFIKKELICRYGLPKSIITDNAKNLNN
        LKFIKKELICRYGLPKSIITDNAKNLNN
Subjt:  LKFIKKELICRYGLPKSIITDNAKNLNN

KAA0055609.1 uncharacterized protein E6C27_scaffold222G00930 [Cucumis melo var. makuwa]3.38e-22290.03Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYS YVTKLSQNFEKI FDHVPRE+N+M DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFDIK    CRE+PY+ASEN+KR I+RL MNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFDIK----CREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYAR+CKKCQIYMDKIHVAASPLHI SA WPFSLWGMDVIG IDPKASNGH FILVAIDYFTKWIE ASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IIT+NAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

TYK03243.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]1.45e-221100Show/hide
Query:  MLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNPEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFP
        MLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNPEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFP
Subjt:  MLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNPEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFP

Query:  YQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIH
        YQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIH
Subjt:  YQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIH

Query:  VAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITDNAKNLNN
        VAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITDNAKNLNN
Subjt:  VAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITDNAKNLNN

TrEMBL top hitse value%identityAlignment
A0A5A7T0A1 Ribonuclease H5.3e-17992.75Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVA DMSIKKLKVLGDSMLVIHQVKEEWE RDAKLVPYS YVTKLSQNFEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFD    IKCRE+PY+ASEN+KRTI+RLAMNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGH FILVAIDYFTKWIEAASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IITDNAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

A0A5A7T1X2 Ribonuclease H2.4e-17992.75Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYS YVTKLSQ FEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFD    IKCRE+PY+ASEN+KRTI+RLAMNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYARECKKCQIYMDKIHVAAS LHILSAPWPFSLWGMDVIGPIDPKASNGH FILVAIDYFTKWIEAASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IITDNAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

A0A5A7T7R4 Ribonuclease H1.9e-17690.94Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYS YVTKLSQNFEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFD    IKCRE+PY+ASEN+KRTI+RLAMNFFLS EVLYKRNHDMVLLRCVDEEEAKQIM DI EGIC TH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKY RECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGH F LV+IDYFTKWIE AS+CNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IITDNAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

A0A5A7TZT7 Ribonuclease H1.1e-195100Show/hide
Query:  MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN
        MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN
Subjt:  MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLN

Query:  PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR
        PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR
Subjt:  PEFELHPIQITKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANR

Query:  HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV
        HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV
Subjt:  HMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVV

Query:  LKFIKKELICRYGLPKSIITDNAKNLNN
        LKFIKKELICRYGLPKSIITDNAKNLNN
Subjt:  LKFIKKELICRYGLPKSIITDNAKNLNN

A0A5D3DMD2 Ribonuclease H4.2e-17690.94Show/hide
Query:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP
        AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYS YVTKLSQNFEKISFDHVPREDNRM DALATLAVMFDLN 
Subjt:  AKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNP

Query:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH
        EFELHPIQITKRDV AYCMNVGN+NKPWYFD    IKCRE+PY+ASEN+KR I+RL MNFFLS EVLYKRNHDMVLLRCVDEEEAKQIMTDI EGICGTH
Subjt:  EFELHPIQITKRDVLAYCMNVGNNNKPWYFD----IKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTH

Query:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR
        AN HMMARQILR  YYWT MESDCIKYAR+CKKCQIYMDKIHVAASPLHI SA WPFSLWGMDVIG IDPKASNGH FILVAIDYFTKWIE ASYCNVTR
Subjt:  ANRHMMARQILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTR

Query:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN
        GVVLKFIKKELICRYGLP+ IIT+NAKNLNN
Subjt:  GVVLKFIKKELICRYGLPKSIITDNAKNLNN

SwissProt top hitse value%identityAlignment
P9WLH5 Bifunctional protein Rv2228c1.4e-0633.33Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV
        T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I+++ VPR  N   D LA  A+
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV

Q4R6I1 Gypsy retrotransposon integrase-like protein 16.1e-1529.55Show/hide
Query:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPL
        I+R A  F   D+ L+    D    R   V EEE K+++ +  E   G H   H ++R   ++  +YYWT + +D  ++   C+ CQ+  + + + A   
Subjt:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPL

Query:  HILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD
        H+L    P+SL  +D++GP    ++  H + ++  D FTKW+     C+V+   V K I   +   YG P+ II D
Subjt:  HILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD

Q5RBK0 Gypsy retrotransposon integrase-like protein 14.6e-1529.28Show/hide
Query:  NNKRTIKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHV
        + +R I+R A  F   ++ L+    D    R   V EEE K+++ +  E   G H   H ++R   ++  +YYWT + +D  ++   C+ CQ+  + + +
Subjt:  NNKRTIKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHV

Query:  AASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD
         A   H+L    P+SL  +D++GP    ++  H + ++  D FTKWI     C+V+   V K I   +   YG P+ II D
Subjt:  AASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD

Q66H30 Gypsy retrotransposon integrase-like protein 12.5e-1329.38Show/hide
Query:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASP-
        I+R A  F   ++ L+    D    R   V EEE K+++ +  E   G H   H ++R   ++  SYYWT + +D  ++   C+ CQ+    + VA    
Subjt:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASP-

Query:  LHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD
        L ++  PW  S+  +D++GP    +S  H + ++  D FTKW+     C+V+   + K I   +   YG P+ II D
Subjt:  LHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD

Q9NXP7 Gypsy retrotransposon integrase-like protein 11.8e-1429.55Show/hide
Query:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPL
        I+R A  F   ++ L+    D    R   V EEE K+++ +  E   G H   H ++R   ++  +YYWT + +D  ++   C+ CQ+  + + + A   
Subjt:  IKRLAMNFFLSDEVLYKRNHDMVLLR--CVDEEEAKQIMTDIREGICGTHANRHMMAR--QILRFSYYWTMMESDCIKYARECKKCQIYMDKIHVAASPL

Query:  HILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD
        H+L    P+SL  +D++GP    ++  H + ++  D FTKWI     C+V+   V K I   +   YG P+ II D
Subjt:  HILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITD

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein9.6e-0836.78Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV
        T+N AEY A I+GL+ A +   K +KV GDS LV  Q+K +W+     L         L          HV R  N   D  A LAV
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-1137.93Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV
        T+N+AEY A ++GL+ A D   K + VLGDSMLV  QV+  W+T   K+        +L  +F+     H+ RE N   D  A  A+
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-1137.93Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV
        T+N+AEY A ++GL+ A D   K + VLGDSMLV  QV+  W+T   K+        +L  +F+     H+ RE N   D  A  A+
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAV

AT5G51080.1 RNase H family protein1.2e-0533.72Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLA
        T+N AEY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L        +LS         HV R  N   D  A +A
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLA

AT5G51080.2 RNase H family protein1.2e-0533.72Show/hide
Query:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLA
        T+N AEY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L        +LS         HV R  N   D  A +A
Subjt:  THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTTATGTTTTGAATGCACTCACAATATCGCTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGTGATATGAGTATTAAAAAGTTGAAAGTTTTGGG
TGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGCCCATACGTTACAAAATTGTCTCAAAATTTTGAGAAGA
TTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGCCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCCTGAATTTGAACTTCATCCAATCCAAATT
ACAAAGCGAGATGTGCTAGCATATTGCATGAATGTTGGAAATAATAACAAGCCATGGTATTTTGACATAAAGTGTAGAGAATTTCCATATCAAGCTTCAGAGAATAACAA
ACGCACAATAAAGAGGTTAGCCATGAACTTTTTCTTAAGTGATGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAAC
AAATTATGACAGACATTCGTGAAGGAATATGTGGAACACATGCTAATAGACATATGATGGCTAGACAAATACTTAGATTTAGTTATTATTGGACAATGATGGAATCAGAC
TGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTCCATTGCATATCTTGTCAGCACCATGGCCATTTTCTTTATG
GGGAATGGATGTTATTGGACCTATTGATCCTAAAGCCTCAAATGGCCATCATTTTATTCTTGTGGCCATTGATTACTTCACTAAATGGATAGAGGCTGCATCTTATTGCA
ATGTTACAAGGGGAGTAGTGCTCAAGTTTATCAAGAAAGAGCTTATATGTCGTTATGGTCTCCCAAAGAGTATTATTACGGATAATGCCAAGAACCTTAATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTTATGTTTTGAATGCACTCACAATATCGCTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGTGATATGAGTATTAAAAAGTTGAAAGTTTTGGG
TGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGCCCATACGTTACAAAATTGTCTCAAAATTTTGAGAAGA
TTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGCCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATCTTAATCCTGAATTTGAACTTCATCCAATCCAAATT
ACAAAGCGAGATGTGCTAGCATATTGCATGAATGTTGGAAATAATAACAAGCCATGGTATTTTGACATAAAGTGTAGAGAATTTCCATATCAAGCTTCAGAGAATAACAA
ACGCACAATAAAGAGGTTAGCCATGAACTTTTTCTTAAGTGATGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAAC
AAATTATGACAGACATTCGTGAAGGAATATGTGGAACACATGCTAATAGACATATGATGGCTAGACAAATACTTAGATTTAGTTATTATTGGACAATGATGGAATCAGAC
TGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTCCATTGCATATCTTGTCAGCACCATGGCCATTTTCTTTATG
GGGAATGGATGTTATTGGACCTATTGATCCTAAAGCCTCAAATGGCCATCATTTTATTCTTGTGGCCATTGATTACTTCACTAAATGGATAGAGGCTGCATCTTATTGCA
ATGTTACAAGGGGAGTAGTGCTCAAGTTTATCAAGAAAGAGCTTATATGTCGTTATGGTCTCCCAAAGAGTATTATTACGGATAATGCCAAGAACCTTAATAACTAA
Protein sequenceShow/hide protein sequence
MAKLCFECTHNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSPYVTKLSQNFEKISFDHVPREDNRMPDALATLAVMFDLNPEFELHPIQI
TKRDVLAYCMNVGNNNKPWYFDIKCREFPYQASENNKRTIKRLAMNFFLSDEVLYKRNHDMVLLRCVDEEEAKQIMTDIREGICGTHANRHMMARQILRFSYYWTMMESD
CIKYARECKKCQIYMDKIHVAASPLHILSAPWPFSLWGMDVIGPIDPKASNGHHFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPKSIITDNAKNLNN