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IVF0026834 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026834
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:660931..661131
RNA-Seq ExpressionIVF0026834
SyntenyIVF0026834
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025512.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]7.68e-2882.86Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVV EESPKELV E VQYVLDEYQDVMAE    TLPP RGIDHEIELLP ARPPAKN YH GPPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

KAA0037019.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.58e-39100Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

KAA0066834.1 reverse transcriptase [Cucumis melo var. makuwa]4.48e-2481.43Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVV EESPKELV E VQYVLDEYQDVMAE    TLPP RGIDHEIELLP ARPP KNVYH G PE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

XP_022932976.1 polygalacturonase-like [Cucurbita moschata]1.39e-1458.57Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIP++ E + +E V E ++ VLD Y D+M E    TLPP RGIDHEIELLP  +PPAKN Y M PPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

XP_023550586.1 uncharacterized protein LOC111808682 [Cucurbita pepo subsp. pepo]5.93e-1558.57Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIP++ E + +E V E ++ VLD Y D+M E    TLPP RGIDHEIELLP  +PPAKN Y M PPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

TrEMBL top hitse value%identityAlignment
A0A5A7SK59 RNA-directed DNA polymerase-like protein1.0e-2082.86Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVV EESPKELV E VQYVLDEYQDVMAE    TLPP RGIDHEIELLP ARPPAKN YH GPPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

A0A5D3C405 RNA-directed DNA polymerase-like protein5.9e-29100Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

A0A5D3DWT3 Reverse transcriptase1.4e-1981.43Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIPVV EESPKELV E VQYVLDEYQDVMAE    TLPP RGIDHEIELLP ARPP KNVYH G PE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

A0A6J1EWT2 aspartic proteinase PCS1-like8.5e-1258.57Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIP++ E + +E V E ++ VLD Y D+M E    TLPP RGIDHEIELLP  +PPAKN Y M PPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

A0A6J1EXV2 polygalacturonase-like8.5e-1258.57Show/hide
Query:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA
        MAIP++ E + +E V E ++ VLD Y D+M E    TLPP RGIDHEIELLP  +PPAKN Y M PPE A
Subjt:  MAIPVVIEESPKELVSEVVQYVLDEYQDVMAE----TLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCCCAGTGGTTATTGAGGAAAGTCCAAAAGAGCTAGTTTCGGAGGTAGTTCAGTATGTCTTAGATGAATACCAAGACGTAATGGCAGAGACTCTACCTCCACC
CAGGGGGATAGATCATGAGATAGAACTTCTACCCAGGGCGAGACCCCCTGCAAAGAATGTGTATCACATGGGGCCGCCAGAATGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCCCAGTGGTTATTGAGGAAAGTCCAAAAGAGCTAGTTTCGGAGGTAGTTCAGTATGTCTTAGATGAATACCAAGACGTAATGGCAGAGACTCTACCTCCACC
CAGGGGGATAGATCATGAGATAGAACTTCTACCCAGGGCGAGACCCCCTGCAAAGAATGTGTATCACATGGGGCCGCCAGAATGGGCATAA
Protein sequenceShow/hide protein sequence
MAIPVVIEESPKELVSEVVQYVLDEYQDVMAETLPPPRGIDHEIELLPRARPPAKNVYHMGPPEWA