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IVF0026839 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026839
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S acidic ribosomal protein P1-like
Genome locationchr07:12628630..12630039
RNA-Seq ExpressionIVF0026839
SyntenyIVF0026839
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045366.1 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa]3.67e-6499.07Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAA ASAIEEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_004138012.2 60S acidic ribosomal protein P1 [Cucumis sativus]2.48e-6297.22Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_008455614.1 PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo]9.00e-65100Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_038905168.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.75e-6296.3Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAP  SAAAA A+EEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

XP_038905286.1 60S acidic ribosomal protein P1-like [Benincasa hispida]8.32e-6194.44Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAV+AAAGL VESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAP  SAAAA A+EEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LTV1 Uncharacterized protein5.1e-4697.22Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A1S3C0X1 60S acidic ribosomal protein P1-like isoform X17.1e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A5A7TTB2 60S acidic ribosomal protein P1-like isoform X12.1e-4799.07Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD
        MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAA ASAIEEKKEEPKEESDD
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDD

Query:  DMGFSLFD
        DMGFSLFD
Subjt:  DMGFSLFD

A0A6J1CGB2 60S acidic ribosomal protein P1-like5.2e-4390.09Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAP---TASAAAASAIEEKKEEPKEE
        MSTSELACAYAA+AL+DDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPV+VAAP    A++AAA A+EEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAP---TASAAAASAIEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like3.4e-4290Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEES
        MSTSELACAYAALALHDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA V+VAAP   A++AAA A+EEKKEEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-22.1e-2864.6Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAAPVAVAAPTA---SAAAASAIEEKKEEPK
        MST  ELAC+YA + L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG  GGG  APV+ AAP A   +AAAA A EEKK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGC-GGGAAAPVAVAAPTA---SAAAASAIEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P11.4e-2461.47Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEES-D
        MSTSELAC YAAL LHDDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ NVG GGGAA   A AAP A  A A+    KKEE KE S +
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEES-D

Query:  DDMGFSLFD
        +DMGFSLFD
Subjt:  DDMGFSLFD

P52855 60S acidic ribosomal protein P12.8e-3374.55Show/hide
Query:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEES
        M++ ELAC YAAL L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L+VG GGG AAPVA AAP   A+AAAA A+EEKKEE KEES
Subjt:  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-14.9e-3065.18Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP A   +AAA +A E+KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-36.4e-3064.6Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP     A+AAA +A E+KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family3.5e-3165.18Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP A   +AAA +A E+KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family3.5e-3165.18Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP A   +AAA +A E+KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family3.5e-3165.18Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP A   +AAA +A E+KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family4.5e-3164.6Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP     A+AAA +A E+KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family4.5e-3164.6Show/hide
Query:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK
        MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL++NVG GGG  APVA AAP     A+AAA +A E+KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTG
TGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTG
TAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAA
mRNA sequenceShow/hide mRNA sequence
AGGGCCCAATAGATTTAGCCCAAGTAAGATGAAACCGCTCCAATACCTATGGAAGCATGAAAAACCCTAAATCCTAACACCTCTTCGCTCAATATATATTCCGATTCAGA
GCAGTGGCGATCACCGTAAGCGCATTTTGCCTCCCAATCGTCTCCTAGCCATCTATTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACG
ACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGG
AACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAA
GAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTAGTTTTGTAGGATTTTATTAGGAAACTATTGGGTGGGTAG
CTTAATCTTGATTTTCCGCTGTTGGTCTCAAGATTTGTTTTTTTTACTAGGCCGTTTTGAGTTTTGATTTGCCTTCAATGTACGATGGTAACTGCATCTTTTCACTCCTT
TTTCTTAACTACACATTGGAATGAGATCAAACTTTATGAGAGGAATTCTTTGGTTAAACCCTGG
Protein sequenceShow/hide protein sequence
MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD