; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026840 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026840
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:26196030..26196443
RNA-Seq ExpressionIVF0026840
SyntenyIVF0026840
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033399.1 hypothetical protein E6C27_scaffold111G00500 [Cucumis melo var. makuwa]7.40e-96100Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW
        VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW

KAA0050358.1 uncharacterized protein E6C27_scaffold88G00900 [Cucumis melo var. makuwa]2.38e-6781.62Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQ QS LMSFDLN PF FEGAHFKRWKQKMLFFLTLKKVATTCTTEK KVSEKD T+EQLKNL+TWTET  I KN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDA QKK++TEE G KKYAV+ YLRYQ+T+ +SVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]2.75e-6880.88Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MA +IQSDLMS D N+PF FEGA+FKRWKQKMLFFLTLKKV T CTTEK KV EKD T+EQLKNL TWTET  ICKN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++TEEAG KKYAVS+YL YQM D KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]1.29e-7484.56Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMSFDLN+PF FEGAHFKRWKQKMLFFLTLKKVAT CTTEKP+V EKD T++QLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++TEEA  KKYA+S+YLRYQMTD KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]5.34e-7486.03Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMS DLN+ F FEGAHFKRWKQK+LFFLTLKKVAT CTTEKPKVSEKD T+EQLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++TEEAG KKYAVS+YLRYQMTD KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

TrEMBL top hitse value%identityAlignment
A0A5A7SW40 Uncharacterized protein1.4e-72100Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW
        VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVEW

A0A5A7UA92 Uncharacterized protein7.1e-5385.16Show/hide
Query:  LMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVEVWDALQKK
        LMS DLN+PF FEGAHFKRWKQKMLFFLTLKKVAT CTTEKPKVSEKD TKEQLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTTA +VW+ALQKK
Subjt:  LMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVEVWDALQKK

Query:  HNTEEAGLKKYAVSQYLRYQMTDHKSVE
        ++TEEAG KKYAVS+YLRYQMTD +SVE
Subjt:  HNTEEAGLKKYAVSQYLRYQMTDHKSVE

A0A5A7USR3 Uncharacterized protein1.8e-5684.56Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMSFDLN+PF FEGAHFKRWKQKMLFFLTLKKVAT CTTEKP+V EKD T++QLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++TEEA  KKYA+S+YLRYQMTD KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

A0A5A7UYY4 Uncharacterized protein1.1e-5686.03Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        MAGQIQSDLMS DLN+ F FEGAHFKRWKQK+LFFLTLKKVAT CTTEKPKVSEKD T+EQLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTTA E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++TEEAG KKYAVS+YLRYQMTD KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein4.9e-5483.09Show/hide
Query:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE
        M GQIQSDLMS DLN+PF FEGAHFKRWKQKMLFFLTLKKVAT CTTEK KVSEKD  +EQLKNL+TWTET  ICKN LILNGLTDEL DYYSTMTT  E
Subjt:  MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVE

Query:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE
        VWDALQKK++T+EA  KKYAVS+YLRYQMTD KSVE
Subjt:  VWDALQKKHNTEEAGLKKYAVSQYLRYQMTDHKSVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGACAAATCCAATCCGACTTGATGTCTTTTGATCTCAACCAGCCATTCCATTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTCCTCAC
GCTGAAGAAGGTGGCCACTACATGTACTACTGAAAAGCCGAAGGTTTCGGAAAAAGATCTTACAAAAGAACAACTAAAGAACCTCTCCACTTGGACAGAAACTGGCTCAA
TCTGTAAGAACGACCTAATTCTTAATGGTCTTACTGATGAACTAAAAGATTATTATAGTACCATGACTACTGCAGTAGAAGTGTGGGATGCGCTACAAAAGAAGCATAAT
ACTGAGGAAGCGGGGTTGAAGAAGTACGCTGTCAGCCAATATCTGAGATATCAAATGACTGATCACAAATCCGTGGAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGACAAATCCAATCCGACTTGATGTCTTTTGATCTCAACCAGCCATTCCATTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAGATGTTATTTTTCCTCAC
GCTGAAGAAGGTGGCCACTACATGTACTACTGAAAAGCCGAAGGTTTCGGAAAAAGATCTTACAAAAGAACAACTAAAGAACCTCTCCACTTGGACAGAAACTGGCTCAA
TCTGTAAGAACGACCTAATTCTTAATGGTCTTACTGATGAACTAAAAGATTATTATAGTACCATGACTACTGCAGTAGAAGTGTGGGATGCGCTACAAAAGAAGCATAAT
ACTGAGGAAGCGGGGTTGAAGAAGTACGCTGTCAGCCAATATCTGAGATATCAAATGACTGATCACAAATCCGTGGAGTGGTAG
Protein sequenceShow/hide protein sequence
MAGQIQSDLMSFDLNQPFHFEGAHFKRWKQKMLFFLTLKKVATTCTTEKPKVSEKDLTKEQLKNLSTWTETGSICKNDLILNGLTDELKDYYSTMTTAVEVWDALQKKHN
TEEAGLKKYAVSQYLRYQMTDHKSVEW