| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037397.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.63e-188 | 45.44 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL PP +EIDF I+LEPGT PISR YRMA L ELKVQL+KL DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKDG+MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR YGHYEFI++
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVLETL+AN+LYAKFSKC FWLNK + ++ W S++ +F
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
Query: ELH--------------------------------CEALWSLINQQFHPNSEHCAADDENALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEW
L CE+ + + Q+ D + + +S C +QG KA V + RK
Subjt: ELH--------------------------------CEALWSLINQQFHPNSEHCAADDENALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEW
Query: FNTKSA-----YRQEEID--------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
TK A + + EI ++ + K RL E GQ E+FS SS+DGL FE +L V + VK ELLT+AHSSP
Subjt: FNTKSA-----YRQEEID--------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
Query: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV------------------------------------------------------------
F+MH STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQV
Subjt: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV------------------------------------------------------------
Query: ---------------------------------------------------------------------------------GKRRMLGPELVQTTNKAIQ
G++RMLG ELVQT N AIQ
Subjt: ---------------------------------------------------------------------------------GKRRMLGPELVQTTNKAIQ
Query: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
IRARMLTAQS+QKSY+D RCKDLEF +GDMVFLKVAP KGVLRFEKKGK + KY+A+ H+VDFEPLQI+ENLSYEEQ V+IL REVK
Subjt: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
Query: LLRNRGISLVKVLWRNHKADEAT
LR R ISLVKVLWRNH +EAT
Subjt: LLRNRGISLVKVLWRNHKADEAT
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| KAA0056751.1 Retrotransposon protein [Cucumis melo var. makuwa] | 1.18e-195 | 91.88 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
Query: APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVFKDFLDTFVIVFID
APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ VFKDFLDTFVIVFID
Subjt: APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVFKDFLDTFVIVFID
Query: DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Subjt: DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Query: SCHERKQG
SCHERKQG
Subjt: SCHERKQG
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| KAA0061127.1 pol protein [Cucumis melo var. makuwa] | 4.08e-195 | 44.69 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL PP +EIDFAI+LEP T PISRAPYRMA L E+KVQLQ+L DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKD +MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR YGHYEFI+M
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVLETLRAN+LYAKF+KC FWL K + V K++ + CE+ + + Q+
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
Query: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
D D + K F + +R+ + D D + + ++ + + K
Subjt: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
Query: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
A+ R E + E+ + KR L E GQ+E+FS SS+DGL FE +LYV + VK ELLT+AHSSPF+MH GST MYQ+L+ V
Subjt: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
Query: YWWQNMKREVADFVSRCLVYQQV-----------------------------------------------------------------------------
YWW+NMKREVADFV+RCLV QQV
Subjt: YWWQNMKREVADFVSRCLVYQQV-----------------------------------------------------------------------------
Query: --------------------------------------------------GKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDM
G++RMLGP+LVQTTN AIQKIRAR+LT Q++QKSY+D R KDLEF +GD
Subjt: --------------------------------------------------GKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDM
Query: VFLKVAPTKGVLRFEKKGKAKST-------------------------------------KYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRN
VFLKVAP KGVLRFEKKGK +Y+A+P H+VDFEPLQI+ENLSYEEQ VEIL REVK LRN
Subjt: VFLKVAPTKGVLRFEKKGKAKST-------------------------------------KYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRN
Query: RGISLVKVLWRNHKADEAT
R ISLVKVLW+NH +EAT
Subjt: RGISLVKVLWRNHKADEAT
|
|
| TYJ97514.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.63e-188 | 45.44 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL PP +EIDF I+LEPGT PISR YRMA L ELKVQL+KL DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKDG+MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR YGHYEFI++
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVLETL+AN+LYAKFSKC FWLNK + ++ W S++ +F
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
Query: ELH--------------------------------CEALWSLINQQFHPNSEHCAADDENALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEW
L CE+ + + Q+ D + + +S C +QG KA V + RK
Subjt: ELH--------------------------------CEALWSLINQQFHPNSEHCAADDENALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEW
Query: FNTKSA-----YRQEEID--------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
TK A + + EI ++ + K RL E GQ E+FS SS+DGL FE +L V + VK ELLT+AHSSP
Subjt: FNTKSA-----YRQEEID--------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
Query: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV------------------------------------------------------------
F+MH STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQV
Subjt: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV------------------------------------------------------------
Query: ---------------------------------------------------------------------------------GKRRMLGPELVQTTNKAIQ
G++RMLG ELVQT N AIQ
Subjt: ---------------------------------------------------------------------------------GKRRMLGPELVQTTNKAIQ
Query: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
IRARMLTAQS+QKSY+D RCKDLEF +GDMVFLKVAP KGVLRFEKKGK + KY+A+ H+VDFEPLQI+ENLSYEEQ V+IL REVK
Subjt: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
Query: LLRNRGISLVKVLWRNHKADEAT
LR R ISLVKVLWRNH +EAT
Subjt: LLRNRGISLVKVLWRNHKADEAT
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| TYK03797.1 pol protein [Cucumis melo var. makuwa] | 1.36e-196 | 45.19 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL PP +EIDFAI+LEP T PISRAPYRMA L E+KVQLQ+L DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKD +MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR YGHYEFI+M
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVLETLRAN+LYAKF+KC FWL K + V K++ + CE+ + + Q+
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
Query: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
D D + K F + +R+ + D D + + ++ + + K
Subjt: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
Query: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
A+ R E + E+ + KR L E GQ+E+FS SS+DGL FE +LYV + VK ELLT+AHSSPF+MH GST MYQ+L+ V
Subjt: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
Query: YWWQNMKREVADFVSRCLVYQQV-----------------------------------------------------------------------------
YWW+NMKREVADFV+RCLV QQV
Subjt: YWWQNMKREVADFVSRCLVYQQV-----------------------------------------------------------------------------
Query: -----------------------------------------GKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTK
G++RMLGP+LVQTTN AIQKIRAR+LT Q++QKSY+D R KDLEF +GD VFLKVAP K
Subjt: -----------------------------------------GKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTK
Query: GVLRFEKKGKAKST-------------------------------------KYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRNRGISLVKVL
GVLRFEKKGK +Y+A+P H+VDFEPLQI+ENLSYEEQ VEIL REVK LRNR ISLVKVL
Subjt: GVLRFEKKGKAKST-------------------------------------KYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRNRGISLVKVL
Query: WRNHKADEAT
W+NH +EAT
Subjt: WRNHKADEAT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T758 Ty3-gypsy retrotransposon protein | 2.1e-159 | 45.44 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL PP +EIDF I+LEPGT PISR YRMA L ELKVQL+KL DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKDG+MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR YGHYEFI++
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVLETL+AN+LYAKFSKC FWLNK + ++ W S++ +F
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
Query: EL--------------------------------HCEALWSLINQQFHPNSEHCAADDENALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEW
L CE+ + + Q+ D + + +S C +QG KA V + RK
Subjt: EL--------------------------------HCEALWSLINQQFHPNSEHCAADDENALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEW
Query: FNTKSA-----YRQEEI--------------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
TK A + + EI ++ + K RL E GQ E+FS SS+DGL FE +L V + VK ELLT+AHSSP
Subjt: FNTKSA-----YRQEEI--------------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
Query: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ-------------------------------------------------------------
F+MH STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQ
Subjt: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ-------------------------------------------------------------
Query: --------------------------------------------------------------------------------VGKRRMLGPELVQTTNKAIQ
VG++RMLG ELVQT N AIQ
Subjt: --------------------------------------------------------------------------------VGKRRMLGPELVQTTNKAIQ
Query: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
IRARMLTAQS+QKSY+D RCKDLEF +GDMVFLKVAP KGVLRFEKKGK + KY+A+ H+VDFEPLQI+ENLSYEEQ V+IL REVK
Subjt: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
Query: LLRNRGISLVKVLWRNHKADEAT
LR R ISLVKVLWRNH +EAT
Subjt: LLRNRGISLVKVLWRNHKADEAT
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| A0A5A7UTC6 Retrotransposon protein | 1.1e-155 | 91.88 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWG
Query: APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVFKDFLDTFVIVFID
APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ VFKDFLDTFVIVFID
Subjt: APILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVFKDFLDTFVIVFID
Query: DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Subjt: DILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Query: SCHERKQG
SCHERKQG
Subjt: SCHERKQG
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| A0A5A7V2M6 Pol protein | 6.6e-161 | 44.69 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL PP +EIDFAI+LEP T PISRAPYRMA L E+KVQLQ+L DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKD +MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR YGHYEFI+M
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVLETLRAN+LYAKF+KC FWL K + V K++ + CE+ + + Q+
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
Query: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
D D + K F + +R+ + D D + + ++ + + K
Subjt: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
Query: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
A+ R E + E+ + KR L E GQ+E+FS SS+DGL FE +LYV + VK ELLT+AHSSPF+MH GST MYQ+L+ V
Subjt: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
Query: YWWQNMKREVADFVSRCLVYQQ------------------------------------------------------------------------------
YWW+NMKREVADFV+RCLV QQ
Subjt: YWWQNMKREVADFVSRCLVYQQ------------------------------------------------------------------------------
Query: -------------------------------------------------VGKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDM
VG++RMLGP+LVQTTN AIQKIRAR+LT Q++QKSY+D R KDLEF +GD
Subjt: -------------------------------------------------VGKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDM
Query: VFLKVAPTKGVLRFEKKGKAKS-------------------------------------TKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRN
VFLKVAP KGVLRFEKKGK +Y+A+P H+VDFEPLQI+ENLSYEEQ VEIL REVK LRN
Subjt: VFLKVAPTKGVLRFEKKGKAKS-------------------------------------TKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRN
Query: RGISLVKVLWRNHKADEAT
R ISLVKVLW+NH +EAT
Subjt: RGISLVKVLWRNHKADEAT
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| A0A5D3BEN0 Ty3-gypsy retrotransposon protein | 2.1e-159 | 45.44 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL PP +EIDF I+LEPGT PISR YRMA L ELKVQL+KL DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKDG+MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR YGHYEFI++
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVLETL+AN+LYAKFSKC FWLNK + ++ W S++ +F
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF
Query: EL--------------------------------HCEALWSLINQQFHPNSEHCAADDENALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEW
L CE+ + + Q+ D + + +S C +QG KA V + RK
Subjt: EL--------------------------------HCEALWSLINQQFHPNSEHCAADDENALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEW
Query: FNTKSA-----YRQEEI--------------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
TK A + + EI ++ + K RL E GQ E+FS SS+DGL FE +L V + VK ELLT+AHSSP
Subjt: FNTKSA-----YRQEEI--------------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSP
Query: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ-------------------------------------------------------------
F+MH STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQ
Subjt: FSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ-------------------------------------------------------------
Query: --------------------------------------------------------------------------------VGKRRMLGPELVQTTNKAIQ
VG++RMLG ELVQT N AIQ
Subjt: --------------------------------------------------------------------------------VGKRRMLGPELVQTTNKAIQ
Query: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
IRARMLTAQS+QKSY+D RCKDLEF +GDMVFLKVAP KGVLRFEKKGK + KY+A+ H+VDFEPLQI+ENLSYEEQ V+IL REVK
Subjt: KIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKA----------KSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVK
Query: LLRNRGISLVKVLWRNHKADEAT
LR R ISLVKVLWRNH +EAT
Subjt: LLRNRGISLVKVLWRNHKADEAT
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| A0A5D3BWB9 Pol protein | 5.9e-162 | 45.19 | Show/hide |
Query: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL PP +EIDFAI+LEP T PISRAPYRMA L E+KVQLQ+L DKGFIR SVS
Subjt: MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVS
Query: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
PWGAP+LF KKKD +MRL IDYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR YGHYEFI+M
Subjt: PWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIM------------
Query: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVLETLRAN+LYAKF+KC FWL K + V K++ + CE+ + + Q+
Subjt: -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS
Query: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
D D + K F + +R+ + D D + + ++ + + K
Subjt: EHCAAD--------------------------------------------DENALKEFVPSSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKS
Query: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
A+ R E + E+ + KR L E GQ+E+FS SS+DGL FE +LYV + VK ELLT+AHSSPF+MH GST MYQ+L+ V
Subjt: AY----------------RQE---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRV
Query: YWWQNMKREVADFVSRCLVYQQ------------------------------------------------------------------------------
YWW+NMKREVADFV+RCLV QQ
Subjt: YWWQNMKREVADFVSRCLVYQQ------------------------------------------------------------------------------
Query: ----------------------------------------VGKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTK
VG++RMLGP+LVQTTN AIQKIRAR+LT Q++QKSY+D R KDLEF +GD VFLKVAP K
Subjt: ----------------------------------------VGKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTK
Query: GVLRFEKKGKAKS-------------------------------------TKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRNRGISLVKVL
GVLRFEKKGK +Y+A+P H+VDFEPLQI+ENLSYEEQ VEIL REVK LRNR ISLVKVL
Subjt: GVLRFEKKGKAKS-------------------------------------TKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRNRGISLVKVL
Query: WRNHKADEAT
W+NH +EAT
Subjt: WRNHKADEAT
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| SwissProt top hits | e value | %identity | Alignment |
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| P0CT34 Transposon Tf2-1 polyprotein | 1.5e-24 | 32.21 | Show/hide |
Query: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
P K ++F ++L E +PI P + + ++ + G IR S + P++F KK+G +R+ +DY+ LNK N YPL I+ L ++QG+
Subjt: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
Query: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
T+ +K+DL+++YH +R+R K AFR G +E+++M F+ F++T V+ ++DDIL++SK+E EH +H+ VL+ L+ L
Subjt: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
Query: AKFSKCVF
+KC F
Subjt: AKFSKCVF
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| P0CT35 Transposon Tf2-2 polyprotein | 1.5e-24 | 32.21 | Show/hide |
Query: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
P K ++F ++L E +PI P + + ++ + G IR S + P++F KK+G +R+ +DY+ LNK N YPL I+ L ++QG+
Subjt: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
Query: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
T+ +K+DL+++YH +R+R K AFR G +E+++M F+ F++T V+ ++DDIL++SK+E EH +H+ VL+ L+ L
Subjt: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
Query: AKFSKCVF
+KC F
Subjt: AKFSKCVF
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| P0CT41 Transposon Tf2-12 polyprotein | 1.5e-24 | 32.21 | Show/hide |
Query: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
P K ++F ++L E +PI P + + ++ + G IR S + P++F KK+G +R+ +DY+ LNK N YPL I+ L ++QG+
Subjt: PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGA
Query: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
T+ +K+DL+++YH +R+R K AFR G +E+++M F+ F++T V+ ++DDIL++SK+E EH +H+ VL+ L+ L
Subjt: TVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLY
Query: AKFSKCVF
+KC F
Subjt: AKFSKCVF
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.0e-26 | 36.87 | Show/hide |
Query: IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDL
I+++PG PY + E+ +QKL D FI S SP +P++ KKDG RL +DYR LNK T+ + +PL RIDNL ++ A + + +DL
Subjt: IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDL
Query: RTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVF
+ YHQ+ + K AF G YE+ +M F + DT FV V++DDIL++S++ EH +HL VLE L+ L K KC F
Subjt: RTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVF
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.6e-26 | 29.77 | Show/hide |
Query: IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDL
I+++PG PY + E+ +QKL D FI S SP +P++ KKDG RL +DYR LNK T+ + +PL RIDNL ++ A + + +DL
Subjt: IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDL
Query: RTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWL
+ YHQ+ + K AF G YE+ +M F + DT FV V++DDIL++S++ EH +HL VLE L+ L K KC F
Subjt: RTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWL
Query: NKND----DAAVLKLQPQWSQLSNFFEL-------HCEALWSLIN--QQFHPNSEHCAADDENALKEFVPSSSSSCHERKQGQKALDVDNGQIRKGMILE
+ + + K+ P + + + + +IN ++F PN A ++ F+ S ++ KA+D + +L
Subjt: NKND----DAAVLKLQPQWSQLSNFFEL-------HCEALWSLIN--QQFHPNSEHCAADDENALKEFVPSSSSSCHERKQGQKALDVDNGQIRKGMILE
Query: WFNTKSAYR
FN K+ YR
Subjt: WFNTKSAYR
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