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IVF0026900 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026900
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionserine-rich protein-related
Genome locationchr01:31032992..31033636
RNA-Seq ExpressionIVF0026900
SyntenyIVF0026900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]1.30e-71100Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]1.28e-3670.48Show/hide
Query:  MANKTASSSR-LCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP
        MANKTA SSR LCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKA + T     +KAFLMQ++KPSS  LQRR NFQPKPSRFCN  S  D 
Subjt:  MANKTASSSR-LCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP

Query:  RLAVS
         LAVS
Subjt:  RLAVS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]2.22e-3469.52Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAAT-TTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP
        MANKTASSSRLCLCAPT+HPGSFRCSLHRRP  +S KT        GSQSKAAT T+T     K FLMQ +KPSSH L+RR NFQPKPSRFCN  S  D 
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAAT-TTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP

Query:  RLAVS
        RL VS
Subjt:  RLAVS

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]1.20e-5685.85Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPP--HGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD
        M NKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTP PLPPP   GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRG+F+PKPSRFC++VSA D
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPP--HGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD

Query:  PRLAVS
        PRLAVS
Subjt:  PRLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]7.52e-7199.04Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

TrEMBL top hitse value%identityAlignment
A0A061G8R4 Uncharacterized protein6.2e-1755.79Show/hide
Query:  SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAA-----TTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSA
        SS+R CLC+PTTHPGSFRCS HR    +S K+    P  +  +SKAA     TT +    +KAFLMQI+KPSSH LQRR NFQ KP+RFC + S+
Subjt:  SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAA-----TTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSA

A0A0A0K698 Uncharacterized protein5.6e-4285.85Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD
        M NKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTP PLPP  P GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRG+F+PKPSRFC++VSA D
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD

Query:  PRLAVS
        PRLAVS
Subjt:  PRLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998229.2e-5399.04Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A5A7UZ19 Uncharacterized protein2.4e-53100Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A6J1DD51 uncharacterized protein LOC1110193811.9e-2161.76Show/hide
Query:  MANKT----ASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY---FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNI
        MA KT    AS+SRLCLCAPTTHPGSFRCSLHRRP  +S K          S++ AA+   D      +KAFLMQI+KPSSH LQRR NFQPKPSRFCN+
Subjt:  MANKT----ASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY---FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNI

Query:  VS
         S
Subjt:  VS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein8.3e-0647.37Show/hide
Query:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT
        ++ +T+ +  +C+C+PTTHPGSF+C LHR PS   +K+
Subjt:  MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT

AT5G11090.1 serine-rich protein-related4.5e-1234.26Show/hide
Query:  SRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRF
        SR C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  +QP+PSR 
Subjt:  SRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRF

Query:  CNIVSAPD
          +  A +
Subjt:  CNIVSAPD

AT5G20370.1 serine-rich protein-related1.7e-0632.38Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPH----------------------GSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQP
        + R CLC+PTTHPGSFRCS HRR  +   KT                               S +K  +   +  F ++    + KPSS    RR  F+P
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPH----------------------GSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQP

Query:  KPSRF
        + SRF
Subjt:  KPSRF

AT5G25280.1 serine-rich protein-related1.3e-1132.46Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ
        +K   S R C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  ++
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ

Query:  PKPSRFCNIVSAPD
        P+ SR  ++  A D
Subjt:  PKPSRFCNIVSAPD

AT5G25280.2 serine-rich protein-related1.3e-1132.46Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ
        +K   S R C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  ++
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ

Query:  PKPSRFCNIVSAPD
        P+ SR  ++  A D
Subjt:  PKPSRFCNIVSAPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCCCACAA
GACACCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGA
GTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTAAGGCTATAACTTCCCGTTTCCAATGGCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGC
CTCCACCGCCGTCCCTCGAATTCCTCCCACAAGACACCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAA
GGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTC
GTTTGGCTGTTTCATGATCGTGAATCGCGTACGTATGCATACATATGTGATTCATGGTTTTTGAAATTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTG
TGTTGTGTACAGGGGAACGTGAAATTGAAAACGTGATTAAGCGTTTCTGATCTTTGTTTTGAGATTAATTTATGGAATTGTTAGGGCTTTTGAACTGAAATTGTGTAGTT
TGTATATAATTGGAGGATTAGCAGACTGATCTTGTAAATAGTGAGAAAACTACAACTTTTATGAAACATAAAATAGTTTCAAATATTGATTGGAG
Protein sequenceShow/hide protein sequence
MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS