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IVF0026906 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026906
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:14523143..14523550
RNA-Seq ExpressionIVF0026906
SyntenyIVF0026906
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046268.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.33e-88100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.76e-8292.59Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFGTTYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMH HGRGRGEHNEYLY EVPAA+P+
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.02e-8394.07Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFGTTYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY EVPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]7.25e-8291.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFG TYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY +VPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]3.78e-8291.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFG TYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY +VPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-6391.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFG TYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY +VPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

A0A5A7TTS7 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.8e-70100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.1e-6492.59Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFGTTYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMH HGRGRGEHNEYLY EVPAA+P+
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-6594.07Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFGTTYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY EVPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-6391.85Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMMM TFG TYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYY

Query:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE
        DLGS PSSSYMHGHGRGRGEHNEYLY +VPAA+PE
Subjt:  DLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTTTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GAAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAGTTATGTTAGTCCAGTAATGATGATGGCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAATAGAATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATATTATGATTTAGGAAGTTATCCATCGTCTTCATAC
ATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTCCGAAGTGCCTGCAGCGATACCCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTTTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GAAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAGTTATGTTAGTCCAGTAATGATGATGGCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAATAGAATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATATTATGATTTAGGAAGTTATCCATCGTCTTCATAC
ATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTCCGAAGTGCCTGCAGCGATACCCGAGTAA
Protein sequenceShow/hide protein sequence
MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYYDLGSYPSSSY
MHGHGRGRGEHNEYLYSEVPAAIPE