; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026929 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026929
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUBP-type domain-containing protein
Genome locationchr07:24223245..24225630
RNA-Seq ExpressionIVF0026929
SyntenyIVF0026929
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001607 - Zinc finger, UBP-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044348.1 histone deacetylase 6 [Cucumis melo var. makuwa]1.20e-10699.32Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

KAG6600290.1 Histone deacetylase 6, partial [Cucurbita argyrosperma subsp. sororia]2.74e-8482.43Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MA EAGSSSS  N  P +I  E+EV EE LYGA SGWV+ALTSCDHL SL SDLAHIPPP T C +C+NPKENWLCLCCK+VFCSRFVNKHMLQHY+QS 
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        H LALSYSDLSVWCFSCDAYLDAQ+IQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_004152271.1 histone deacetylase 6 [Cucumis sativus]7.01e-10195.95Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAE+AGSSSSTSN L LII  EDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENW+CLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_008454385.1 PREDICTED: histone deacetylase 6 [Cucumis melo]2.94e-107100Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_038904979.1 histone deacetylase 6 [Benincasa hispida]2.19e-9088.51Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MA+EAGSSSS  N LPLI+  E+EVEEELLYGA SGWV+ALTSCDHLA LS DLAHIPPP  PCS+CQNPKENWLCL CKDVFCSRFVNKHMLQHYEQ T
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

TrEMBL top hitse value%identityAlignment
A0A0A0KT14 UBP-type domain-containing protein3.4e-7795.95Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAE+AGSSSSTSN L LI  IEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENW+CLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A1S3BZ94 histone deacetylase 63.5e-82100Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A5A7TNA2 Histone deacetylase 61.0e-8199.32Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A6J1D695 histone deacetylase 62.1e-6382.43Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MA EAGSSS  SN  P IIE   E  EE L+GA +GWV+ALT CDHLASLSSDLAHIP P T CS+CQNPKENWLCLCCK++ CSRFVNKHMLQHY+QST
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPV+EVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A6J1FUZ8 BTB/POZ domain-containing protein NPY2-like isoform X23.8e-6074.66Show/hide
Query:  EEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC
        E+  +S+S+ +  P + +   ++ +E LYGA SGWV+ALTSCDHL SL SDLAHIPPP T C +C+NPKENWLCLCCK+VFCSRFVNKHMLQHY+QS H 
Subjt:  EEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQ+IQELRPVHEVAYILKFGE PPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

SwissProt top hitse value%identityAlignment
Q20296 Histone deacetylase 65.5e-1634.67Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPP----PQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHY
        MA+++ SS S+S+              E++    +  V  L +C HL     ++  +PP     +T CS+CQ   E W CL C    C RFVN+H + H+
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPP----PQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHY

Query:  EQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
          S+H +ALS +DLSVWC+ CD+Y+       L      A+  KFGE  P
Subjt:  EQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Q54QE6 NAD-dependent deacetylase sir2A1.1e-1145Show/hide
Query:  TPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        T C  C +  ENW+C+ C  V CSR VN H  +H+E + H ++ S+SD S WC++CD Y+
Subjt:  TPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

Q9H0E7 Ubiquitin carboxyl-terminal hydrolase 445.3e-1132.14Show/hide
Query:  ALTSCDHLA--SLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        A+ +C H+    L+ D + + P +  C  C   +  W CL C  V C R++ +H L+H+++S+H +AL  +++ V+C+ CD Y+
Subjt:  ALTSCDHLA--SLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

Q9UBN7 Histone deacetylase 62.6e-1842.2Show/hide
Query:  VQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY
        V  L  C HL ++    A       PC  C   +ENW+CL C  V+C R++N HMLQH+  S H L LSY DLS WC+ C AY+  Q + +   V  +A+
Subjt:  VQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY

Query:  ILKFGEAPP
          KFGE  P
Subjt:  ILKFGEAPP

Q9Z2V5 Histone deacetylase 62.9e-1736.99Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        + E AG      N L L     D   +++ Y      V  L+ C HL ++    A       PC  C   +ENW+CL C  V+CSR+VN HM+ H+E S 
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        H L LS  DLS WC+ C AY+     ++L+ V   A+  KFGE  P
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Arabidopsis top hitse value%identityAlignment
AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein6.5e-1254.55Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQ
        MAE+A SSSS+S+      E+ DE ++ +L GAGSGWV+A  +CDHL +LS DL H+P P TPCS+
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQ

AT2G14830.2 Regulator of Vps4 activity in the MVB pathway protein1.5e-5667.81Show/hide
Query:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST
        MAE+A SSSS+S+      E+ DE ++ +L GAGSGWV+A  +CDHL +LS DL H+P P TPCS+CQNP ENWLCLCCK+V CSRFVN+HML H++Q+ 
Subjt:  MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        HCLALSYSDLSVWCF C+AYLDAQ+I +LRP+H+ AYILKFGEAPP
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

AT2G26000.1 zinc finger (C3HC4-type RING finger) family protein8.2e-0731.75Show/hide
Query:  PPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        P  + C  CQ  +  W+C+ C  V C R+   H  +H+E++ HC +L      VW ++ D Y+
Subjt:  PPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL

AT2G26000.2 zinc finger (C3HC4-type RING finger) family protein8.2e-0731.75Show/hide
Query:  PPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL
        P  + C  CQ  +  W+C+ C  V C R+   H  +H+E++ HC +L      VW ++ D Y+
Subjt:  PPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAAGCCGGTTCATCTTCGTCCACTTCCAACCAACTGCCACTAATAATCGAAATCGAAGATGAAGTTGAGGAAGAACTCTTATACGGCGCCGGATCGGGATG
GGTCCAGGCTCTTACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCAGACTCCCTGTAGCCAATGCCAGAATCCCAAGGAGAACT
GGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAGCCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTG
TCAGTTTGGTGTTTCTCCTGCGATGCATATTTGGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGGCGAGGCCCCACCCTT
TCGATAG
mRNA sequenceShow/hide mRNA sequence
TCTGTGTGCTCATCAATGGCGGAAGAAGCCGGTTCATCTTCGTCCACTTCCAACCAACTGCCACTAATAATCGAAATCGAAGATGAAGTTGAGGAAGAACTCTTATACGG
CGCCGGATCGGGATGGGTCCAGGCTCTTACTTCTTGCGATCATCTCGCTTCCTTATCTTCCGACCTCGCTCACATTCCGCCCCCTCAGACTCCCTGTAGCCAATGCCAGA
ATCCCAAGGAGAACTGGCTGTGTTTATGCTGTAAGGATGTCTTTTGTAGCCGTTTTGTGAATAAGCACATGCTTCAACATTATGAGCAATCAACTCATTGCCTTGCACTC
AGCTACAGTGATTTGTCAGTTTGGTGTTTCTCCTGCGATGCATATTTGGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTACATACTGAAATTTGG
CGAGGCCCCACCCTTTCGATAGTATTAATCATCCTGCACTGGGGGAACCGAAATATCTGATTATTAGTGTTATAACTTTTCTAGTCTCTCCATATTAGGTGTTTTGATTT
CTTGGTTTGTACATTTCGAGCAAATGGCTTATGATCTGCACATGAATTGGGTTGGGTTGTCATGTTCACGGTAAGTTGTTGGTTCACTTTACAGAAGTGAGGGATAGATT
AGAATCTCCTATCTTGTTCAAGAAAATCATACGAAGCTTTTACTTGAAACTGATGAACTTCTTGTTTCAAACCTTGATGATAACATGAATGAAATTGGTTCCCCAT
Protein sequenceShow/hide protein sequence
MAEEAGSSSSTSNQLPLIIEIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWLCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDL
SVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR