; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026951 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026951
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolygalacturonase
Genome locationchr02:13837796..13840578
RNA-Seq ExpressionIVF0026951
SyntenyIVF0026951
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33764.1 polygalacturonase [Cucumis melo subsp. melo]5.90e-14690.42Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSS KPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTM+GIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIH QMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

KAA0046810.1 polygalacturonase [Cucumis melo var. makuwa]6.92e-14590.42Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSS KPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTM+GIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIH QMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

KAA0068064.1 polygalacturonase [Cucumis melo var. makuwa]1.76e-14087.08Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKI+SSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC+S KP TIYVPRGRYYLRSG FNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWI FR+VDGVTVSGGNLDGKGAGLWACKNSSS TTCP+             V+SALTSLNSQMFHIVINGCQNVTMKG+KVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   ++ I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

TYK06443.1 polygalacturonase [Cucumis melo var. makuwa]1.76e-14087.08Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKI+SSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC+S KP TIYVPRGRYYLRSG FNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWI FR+VDGVTVSGGNLDGKGAGLWACKNSSS TTCP+             V+SALTSLNSQMFHIVINGCQNVTMKG+KVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   ++ I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

TYK26944.1 polygalacturonase [Cucumis melo var. makuwa]3.63e-14791.67Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

TrEMBL top hitse value%identityAlignment
A0A5A7TUJ2 Polygalacturonase1.8e-11590.42Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSS KPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTM+GIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIH QMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

A0A5A7VKX0 Polygalacturonase4.1e-11287.08Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKI+SSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC+S KP TIYVPRGRYYLRSG FNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWI FR+VDGVTVSGGNLDGKGAGLWACKNSSS TTCP+             V+SALTSLNSQMFHIVINGCQNVTMKG+KVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   ++ I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

A0A5D3C3E8 Polygalacturonase4.1e-11287.08Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKI+SSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC+S KP TIYVPRGRYYLRSG FNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWI FR+VDGVTVSGGNLDGKGAGLWACKNSSS TTCP+             V+SALTSLNSQMFHIVINGCQNVTMKG+KVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   ++ I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

A0A5D3DTW1 Polygalacturonase3.2e-11791.67Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

E5GBC3 Polygalacturonase1.8e-11590.42Show/hide
Query:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
        MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSS KPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV
Subjt:  MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS             VVSALTSLNSQMFHIVINGCQNVTM+GIKVLASGNS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID
        PNTDGIH QMSSNVAVLNSKIGTGDDCISIGP   +++I+
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQID

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438601.5e-4744.83Show/hide
Query:  IQSSSIILIVLVALMNLFTFGNAWSY------NVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLV
        + ++S +++ L  ++  FT  ++ ++      NV+S+G K DG  DST+AF   W  AC+S  P TI VP+GR+ + +  F+G  CK   I IRI G++V
Subjt:  IQSSSIILIVLVALMNLFTFGNAWSY------NVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        AP DF++I +S  WI F +V  V++ GG LD +G  LW CKN+     CP+              +S LTS+NSQ FHIVI+   NV + G+KV A  NS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP
        PNTDGIHV+ S +V + NS+IGTGDDCISIGP
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP

P26216 Exopolygalacturonase1.2e-3636.74Show/hide
Query:  GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG
        G   S+++   G  G+G+TDST+A Q  W++AC      TI +P+G + +    F GPCK + + I++DG L+A +D     +   WI    VD + ++G
Subjt:  GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG

Query:  -GNLDGKGAGLWACKNSSSSTTCPSV-------------VSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDD
         GNLDG+G  +W+  + +    C  +             VS +T LNS+ FH+ +  C+++ +K + V A G+SPNTDGIH+  SS + + N+ IG GDD
Subjt:  -GNLDGKGAGLWACKNSSSSTTCPSV-------------VSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDD

Query:  CISIGPVKHHIQIDG
        CISIGP    + I G
Subjt:  CISIGPVKHHIQIDG

P35338 Exopolygalacturonase4.2e-3737.21Show/hide
Query:  GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG
        G   S+++   G  G+G+TDST+A Q  W++AC      TI +P+G + +    F GPCK + + I++DG L+A +D         WI    VD + ++G
Subjt:  GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG

Query:  -GNLDGKGAGLWACKNSSSSTTCPSV-------------VSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDD
         GNLDG+G  +W+  + +    C  +             VS +T LNS+ FH+ +  C+N+ +K + V A G+SPNTDGIH+  SS + + N+ IG GDD
Subjt:  -GNLDGKGAGLWACKNSSSSTTCPSV-------------VSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDD

Query:  CISIGPVKHHIQIDG
        CISIGP    + I G
Subjt:  CISIGPVKHHIQIDG

P48979 Polygalacturonase1.1e-6660Show/hide
Query:  SYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSGGNLD
        +YNV S G K DG+TDST+AF + W+ AC+S+ P  IYVP G ++LR   F+GPCKNNAI  RI GTLVAPSD++VIGN+  WI F +V+GVT+SGG LD
Subjt:  SYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSGGNLD

Query:  GKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIG
        G+G  LWACK +    +CPS             VVS L SLNSQMFHIVIN  QNV M+G++V  SGNSPNTDGIHVQMSS V +LNSKI TGDDC+SIG
Subjt:  GKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIG

Query:  PVKHHIQIDG
        P   ++ I+G
Subjt:  PVKHHIQIDG

Q6H9K0 Exopolygalacturonase (Fragment)9.9e-3941.35Show/hide
Query:  YNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG-GNLD
        +NV  +G KG G  D +QA    W  AC+S  P+T+ +P+G Y +      GPCK + I  +IDG + AP+D      S  W++F  +DG+TVSG G LD
Subjt:  YNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSG-GNLD

Query:  GKGAGLWACKNSSSSTTCP-------------SVVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIG
        G+G   WA  N   +  C              ++V  +TSLNS+MFHI +  C+++T + + V A G S NTDGIHV +S  V + N+KI TGDDCISIG
Subjt:  GKGAGLWACKNSSSSTTCP-------------SVVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIG

Query:  PVKHHIQI
        P   ++ I
Subjt:  PVKHHIQI

Arabidopsis top hitse value%identityAlignment
AT1G05660.1 Pectin lyase-like superfamily protein8.6e-4639.5Show/hide
Query:  IIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVA
        +I+F  + +    + V ++  N+F        NVVSFG K DG TDST AF   W  AC S   AT+ VP+G + L+  TF GPCK+   F ++ GT++A
Subjt:  IIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVA

Query:  PSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSP
        P D++  GNS  WI F  V+  ++ GG  D +  G W+C+ S  +  CP              ++S + S+NSQ+ H+ +NGC NV ++ +K++A GNSP
Subjt:  PSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSP

Query:  NTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQI
        NTDG HVQ S+ V    S + TGDDC++IGP   ++ I
Subjt:  NTDGIHVQMSSNVAVLNSKIGTGDDCISIGPVKHHIQI

AT2G43860.1 Pectin lyase-like superfamily protein1.1e-4844.83Show/hide
Query:  IQSSSIILIVLVALMNLFTFGNAWSY------NVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLV
        + ++S +++ L  ++  FT  ++ ++      NV+S+G K DG  DST+AF   W  AC+S  P TI VP+GR+ + +  F+G  CK   I IRI G++V
Subjt:  IQSSSIILIVLVALMNLFTFGNAWSY------NVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLV

Query:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS
        AP DF++I +S  WI F +V  V++ GG LD +G  LW CKN+     CP+              +S LTS+NSQ FHIVI+   NV + G+KV A  NS
Subjt:  APSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNS

Query:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP
        PNTDGIHV+ S +V + NS+IGTGDDCISIGP
Subjt:  PNTDGIHVQMSSNVAVLNSKIGTGDDCISIGP

AT2G43870.1 Pectin lyase-like superfamily protein2.0e-6655.9Show/hide
Query:  LVALMNLFTF-----GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFQVIGNS
        + +L+ LF F      +A SYNV+SFG K DG+TD+T+AF  VW  AC+S +P TI VP+GR+ LRS TF+G  CK   +  RIDGTLVAP+D++VIGN 
Subjt:  LVALMNLFTF-----GNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFQVIGNS

Query:  PAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMS
          WI F+++DG+TV GG LD +GA LW CK S  +  CPS             VVS LTSLNSQMFH+VINGC NV ++G+KVLA+GNSPNTDGIHVQ S
Subjt:  PAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMS

Query:  SNVAVLNSKIGTGDDCISIGPVKHHIQID
        S+V++ N+KI TGDDC+SIGP  + + I+
Subjt:  SNVAVLNSKIGTGDDCISIGPVKHHIQID

AT2G43890.1 Pectin lyase-like superfamily protein4.9e-4946.15Show/hide
Query:  SIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNS
        +++L+   + + + +   A +YNVVSFG K DGRTDST+AF   W  AC S    T+ VPRG + L+   F GPC++   F +I GT+VAPSD++ +GNS
Subjt:  SIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNS

Query:  PAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCP-------------SVVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMS
          WI F  V+ +++ GG LD +GA  WAC+ S  S  CP              VVS LTS+NSQ  H+VIN C NV ++ +K++A   SPNTDG+HVQ S
Subjt:  PAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCP-------------SVVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMS

Query:  SNVAVLNSKIGTGDDCISIGP
        + V V +    TGDDCISIGP
Subjt:  SNVAVLNSKIGTGDDCISIGP

AT3G59850.1 Pectin lyase-like superfamily protein1.1e-6453.91Show/hide
Query:  SIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFQVIGN
        S +LIVL+ L+++ +  +A +YN++S+G K DG+TDST+AF  +W+ AC+S+KP TI VP+GR+ LRS  F+G  CK  ++  RI GTLVAPSD++VIG 
Subjt:  SIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFQVIGN

Query:  SPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQM
           WI F+++DG++V GG LD +GA LW+CK S  +  CPS             V+S LTSLNSQMFH+ INGC NV + G+KV A GNSPNTDGIHVQ 
Subjt:  SPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPS-------------VVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQM

Query:  SSNVAVLNSKIGTGDDCISIGPVKHHIQID
        SS V++LNSKI TGDDC+SIGP  + + I+
Subjt:  SSNVAVLNSKIGTGDDCISIGPVKHHIQID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCCAATTTGAGAAGATCCAGAGTAGTTCGATTATATTGATTGTGTTAGTAGCATTGATGAATTTGTTTACTTTTGGTAATGCTTGGTCTTACAATGTTGTTAG
CTTTGGAGGAAAAGGTGATGGAAGAACTGACTCGACACAAGCATTTCAAACTGTTTGGTCTAATGCTTGTTCCTCCATAAAACCAGCCACAATTTATGTCCCACGAGGAA
GATATTACCTTCGCTCTGGAACTTTCAATGGACCTTGCAAAAATAATGCAATCTTTATCCGCATTGATGGCACTTTGGTGGCTCCCTCCGACTTTCAAGTTATTGGAAAC
TCTCCAGCTTGGATTGCTTTTAGGAATGTTGATGGAGTTACCGTCTCAGGTGGCAATCTTGATGGGAAGGGAGCTGGCTTATGGGCTTGCAAGAATTCTTCTAGTAGCAC
TACTTGTCCATCTGTGGTCAGCGCATTGACATCACTCAATAGCCAAATGTTCCATATAGTCATTAATGGTTGTCAAAATGTCACGATGAAAGGTATTAAGGTCTTGGCCT
CTGGCAATAGTCCCAACACAGACGGAATTCATGTGCAAATGTCCTCTAATGTGGCTGTACTAAACTCCAAAATAGGAACTGGAGATGATTGCATTTCCATTGGTCCTGTC
AAACATCACATTCAAATTGATGGAAAGCATACGAACGCAGCAGAAACCAAGATCGGGTTTTTATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCATCCAATTTGAGAAGATCCAGAGTAGTTCGATTATATTGATTGTGTTAGTAGCATTGATGAATTTGTTTACTTTTGGTAATGCTTGGTCTTACAATGTTGTTAG
CTTTGGAGGAAAAGGTGATGGAAGAACTGACTCGACACAAGCATTTCAAACTGTTTGGTCTAATGCTTGTTCCTCCATAAAACCAGCCACAATTTATGTCCCACGAGGAA
GATATTACCTTCGCTCTGGAACTTTCAATGGACCTTGCAAAAATAATGCAATCTTTATCCGCATTGATGGCACTTTGGTGGCTCCCTCCGACTTTCAAGTTATTGGAAAC
TCTCCAGCTTGGATTGCTTTTAGGAATGTTGATGGAGTTACCGTCTCAGGTGGCAATCTTGATGGGAAGGGAGCTGGCTTATGGGCTTGCAAGAATTCTTCTAGTAGCAC
TACTTGTCCATCTGTGGTCAGCGCATTGACATCACTCAATAGCCAAATGTTCCATATAGTCATTAATGGTTGTCAAAATGTCACGATGAAAGGTATTAAGGTCTTGGCCT
CTGGCAATAGTCCCAACACAGACGGAATTCATGTGCAAATGTCCTCTAATGTGGCTGTACTAAACTCCAAAATAGGAACTGGAGATGATTGCATTTCCATTGGTCCTGTC
AAACATCACATTCAAATTGATGGAAAGCATACGAACGCAGCAGAAACCAAGATCGGGTTTTTATCCTAA
Protein sequenceShow/hide protein sequence
MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGN
SPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPSVVSALTSLNSQMFHIVINGCQNVTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPV
KHHIQIDGKHTNAAETKIGFLS