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IVF0026984 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026984
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr06:8129312..8129587
RNA-Seq ExpressionIVF0026984
SyntenyIVF0026984
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.28e-2976Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDL
        M +A NEWRTLVRCQK LEMHLQ+RKRAEL+DF   SQEN SENA + VFS+WGKK SPN FFPL RIGHK FDL
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDL

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]6.09e-3062.75Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDF---------------RCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNP
        + NA  EWRTLVRCQK L+MHLQ+RK AEL+DF               RCSS ENASENA DSVFS+ G+K+  + FFPLLRIGH+ FDLR SYSE+FNP
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDF---------------RCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNP

Query:  HS
        HS
Subjt:  HS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]4.30e-3977.78Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHA
        MANA NEW+TLVRCQK LEM+LQRRK+ ELKDF CSSQENAS+NAPDS FS+WGKKRSP  FF LLRIGHK FDL+ SY E+FN HSWH+
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]5.50e-2978.57Show/hide
Query:  LQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHAP
        ++RR RA+LKDFRCSSQENASEN  DSVFS+W KK +P+ FFPLLRIGHK FDLR SYSE+FNPHSWHAP
Subjt:  LQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHAP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.66e-3285.92Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHK
        MANA NEWR LVRCQK LEMHLQRRKR EL+DFRCSSQEN SENAPDS FS+WGKKRSP+ FFPLLRIGHK
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHK

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein1.6e-3277.78Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHA
        MANA NEW+TLVRCQK LEM+LQRRK+ ELKDF CSSQENAS+NAPDS FS+WGKKRSP  FF LLRIGHK FDL+ SY E+FN HSWH+
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.0e-2378.57Show/hide
Query:  LQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHAP
        ++RR RA+LKDFRCSSQENASEN  DSVFS+W KK +P+ FFPLLRIGHK FDLR SYSE+FNPHSWHAP
Subjt:  LQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHAP

A0A5D3CGX3 Uncharacterized protein6.0e-2462.75Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKD---------------FRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNP
        + NA  EWRTLVRCQK L+MHLQ+RK AEL+D               FRCSS ENASENA DSVFS+ G+K+  + FFPLLRIGH+ FDLR SYSE+FNP
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKD---------------FRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNP

Query:  HS
        HS
Subjt:  HS

A0A5D3DFP2 Uncharacterized protein7.6e-2785.92Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHK
        MANA NEWR LVRCQK LEMHLQRRKR EL+DFRCSSQEN SENAPDS FS+WGKKRSP+ FFPLLRIGHK
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHK

A0A5D3E5W4 NBS-LRR type resistance protein5.1e-2376Show/hide
Query:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDL
        M +A NEWRTLVRCQK LEMHLQ+RKRAEL+DF   SQEN SENA + VFS+WGKK SPN FFPL RIGHK FDL
Subjt:  MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTTCAACGAGTGGCGAACGCTCGTTCGGTGTCAGAAATCACTGGAAATGCATTTGCAGCGAAGGAAACGGGCTGAGCTCAAGGATTTTCGATGCTCCTC
CCAAGAAAACGCAAGCGAGAATGCCCCAGACTCAGTTTTCTCGACCTGGGGCAAAAAGCGGTCTCCCAATAGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGCCTTTCG
ATCTTCGGCGCTCGTACTCCGAGGAATTCAACCCACACTCCTGGCATGCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTTCAACGAGTGGCGAACGCTCGTTCGGTGTCAGAAATCACTGGAAATGCATTTGCAGCGAAGGAAACGGGCTGAGCTCAAGGATTTTCGATGCTCCTC
CCAAGAAAACGCAAGCGAGAATGCCCCAGACTCAGTTTTCTCGACCTGGGGCAAAAAGCGGTCTCCCAATAGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGCCTTTCG
ATCTTCGGCGCTCGTACTCCGAGGAATTCAACCCACACTCCTGGCATGCTCCCTGA
Protein sequenceShow/hide protein sequence
MANAFNEWRTLVRCQKSLEMHLQRRKRAELKDFRCSSQENASENAPDSVFSTWGKKRSPNSFFPLLRIGHKPFDLRRSYSEEFNPHSWHAP