; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0027004 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0027004
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionML domain-containing protein
Genome locationchr04:29235432..29238484
RNA-Seq ExpressionIVF0027004
SyntenyIVF0027004
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136524.1 MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]1.05e-10894.19Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIFPFLLWLCFFPQFSF+TR+QLCDETA+YDITVKGVEISP+P+VRGHPTNM FNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_008442939.1 PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo]6.84e-114100Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022151451.1 uncharacterized protein LOC111019382 [Momordica charantia]1.43e-9788.39Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP+FQMKLIF FL++LC   QFS AT VQLCDETA YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PLRTPLAFF PGSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022983145.1 uncharacterized protein LOC111481784 [Cucurbita maxima]3.93e-9586.45Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPT  MKLIF  LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P  MTFNL+IG PIIAGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PL+TPLAFFLPGSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_038905833.1 uncharacterized protein LOC120091785 [Benincasa hispida]9.70e-10592.26Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPTFQMKLIFP LLWLCF PQFSFAT+VQLCDETA+YD+TVKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYS+SHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFALPP RTPLAFFLPGSYHMQITIVDGDDNKLTCF FDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

TrEMBL top hitse value%identityAlignment
A0A1S3B7M8 uncharacterized protein LOC1034866933.8e-87100Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein3.8e-87100Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1DDJ6 uncharacterized protein LOC1110193829.7e-7588.39Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP+FQMKLIF FL++LC   QFS AT VQLCDETA YDI VKGVEISPSPIVRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PLRTPLAFF PGSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1FAL9 uncharacterized protein LOC1114423322.9e-7184.52Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        ME T  MKLI   LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P NMTFNL+IG PI+AGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PL+TPLAFFLPGSYHMQIT+VDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1J1A9 uncharacterized protein LOC1114817847.0e-7386.45Show/hide
Query:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPT  MKLIF  LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P  MTFNL+IG PIIAGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PL+TPLAFFLPGSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

SwissProt top hitse value%identityAlignment
Q9AST8 MD-2-related lipid-recognition protein ROSY13.0e-0428.93Show/hide
Query:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP
        LL   FF       + Q CD   EY + V  VEISP P+ R     +T   +    I  G  V + ++   + + + S+ +C  T+CP   G     LP 
Subjt:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP

Query:  LRTPLAFFLPGSYHMQITIVD
        + TP        Y + I+I D
Subjt:  LRTPLAFFLPGSYHMQITIVD

Arabidopsis top hitse value%identityAlignment
AT2G16005.1 MD-2-related lipid recognition domain-containing protein2.1e-0528.93Show/hide
Query:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP
        LL   FF       + Q CD   EY + V  VEISP P+ R     +T   +    I  G  V + ++   + + + S+ +C  T+CP   G     LP 
Subjt:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP

Query:  LRTPLAFFLPGSYHMQITIVD
        + TP        Y + I+I D
Subjt:  LRTPLAFFLPGSYHMQITIVD

AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein1.4e-2840.31Show/hide
Query:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM
        AT V  CD   EY++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF +   +    +  PGSY +
Subjt:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM

Query:  QITIVDGDDNKLTCFGFDYELVIASLFGD
        ++ ++DG   +LTC  F +++   S   D
Subjt:  QITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2.2e-2637.41Show/hide
Query:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDF------ALPPLRTP-----
        AT V  CD   EY++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF       LP    P     
Subjt:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDF------ALPPLRTP-----

Query:  -------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
                 F + GSY +++ ++DG   +LTC  F +++   S   D
Subjt:  -------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G44100.1 MD-2-related lipid recognition domain-containing protein2.2e-1833.58Show/hide
Query:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRT
        LL   FF     AT    CD+  +  + V GV+ISP P+V G           G  I  GK+V+ + Y G  +++++HD+C ET+CP   G F L   +T
Subjt:  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRT

Query:  PLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS
          +   PG+Y +++TI D +  +LTC  F +++ + S
Subjt:  PLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS

AT5G06480.1 Immunoglobulin E-set superfamily protein1.4e-2839.53Show/hide
Query:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM
        A  V  C+E AEY++ VK V+ISP+PI  G P   T +   G  I  GK+V+++SYFGWH++S++HD+C ETSCP  +GDF +   +    +  PGSY +
Subjt:  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM

Query:  QITIVDGDDNKLTCFGFDYELVIASLFGD
        ++ ++D    +LTC  F +++ + +   D
Subjt:  QITIVDGDDNKLTCFGFDYELVIASLFGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCCACTTTTCAGATGAAGCTGATTTTTCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCCTTTGCCACTCGAGTCCAACTCTGTGATGAGACCGCTGA
GTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCATCCAACAAATATGACCTTCAATCTACTTATAGGTAATCCAATCATTGCAGGAA
AAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCA
CTGCGAACGCCTCTGGCATTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGT
GATTGCATCACTATTTGGAGATAGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTATAGAACTGTCAACGGTTTGCTTTGCTTCGGCTCAACTTCTCTTCATATTTTTTTGGGATTTTCTCTTCATCCCATTTGATAAACTCCGACGAAGAAGGGATTTTTC
TCACTCACTTTAATGGCAATCGAATCTTTTTGTTTCTCCCATTCTACTCTACCCAAACCCCCGTTTTTATCGCAACCCCTGAGCTTCATTATTAGAAATTCTCAACTTTT
TCTTTAAATTTGTTGTTACAGACCTCGAAAAGAGCATTTTCATGGAACCCACTTTTCAGATGAAGCTGATTTTTCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTC
TCCTTTGCCACTCGAGTCCAACTCTGTGATGAGACCGCTGAGTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCATCCAACAAATAT
GACCTTCAATCTACTTATAGGTAATCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGA
CGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCACTGCGAACGCCTCTGGCATTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGAT
GATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGCTAAGAGATTTTATTTATTGATTATTCAGCTATTGATCTTTGTAT
ATACGAACCCTTCTAGAGCTTTGCCATTTAGATCTTCGTTTGTTCCTTGGGCAGACAACATCTGCCTTGTGACTATTTGAAGAACTAATTCAGGAGAATGAGTAGTGAAA
GTCGAGAAAAAAAATTGCATTGTGGGAGCATTGTACTAATACTTATCATCACGTGTCACACATTTCTTTGTTGTTTGTAGATACAGAGTGGAAAGTGAAACAATTAACTA
CTCC
Protein sequenceShow/hide protein sequence
MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPP
LRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS