CuGenDBv2

Gene ID	IVF0027030
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chlorophyll A-B binding protein
Genome location	chr05:20934752..20943391
RNA-Seq Expression	IVF0027030
Synteny	IVF0027030
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR023329 - Chlorophyll a/b binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055599.1 uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa]

6.20e-87

97.81

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Query:  MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADY
        RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADY

XP_008451793.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo]

4.51e-114

100

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

XP_011648927.1 uncharacterized protein LOC101212671 [Cucumis sativus]

1.56e-100

90.48

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

XP_016902490.1 PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo]

8.41e-103

93.45

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNV           IMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

XP_038889814.1 uncharacterized protein LOC120079625 [Benincasa hispida]

2.21e-84

90.91

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Query:  ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ
        AS SLILPI GGNLPPSQYLSFRH+HPSATFSR GWSRDQDVGRSTHRTRGQAF+ISNVSP KD LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKR+RQ
Subjt:  ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ

Query:  IEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFI
        IEAINGAWAMIGLTAGLVIEGQTGKGILAQL  YFS +INFFI
Subjt:  IEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH95 Uncharacterized protein

1.5e-76

90.48

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSR  D GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

A0A1S3BSE0 uncharacterized protein LOC103492970 isoform X1

7.0e-87

100

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

A0A1S4E3D1 uncharacterized protein LOC103492970 isoform X2

4.6e-78

93.45

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Query:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL
        MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISN           VIMVDPL
Subjt:  MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

A0A5A7UQ54 Uncharacterized protein

3.1e-66

97.81

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Query:  MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADY
        RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ+  Y
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADY

A0A6J1I0N1 uncharacterized protein LOC111468645 isoform X1

2.9e-56

80.27

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Query:  ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        AS +LILPI+GGN   SQ LSFRH+H SATFSR GWSRD+DVG STHRTRGQAFRI    NVSP KD LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKR
Subjt:  ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR
        RRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLA Y + ++NFF+R
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G28025.1 unknown protein

3.4e-25

54.33

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Query:  RHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA
        R + PS++  + G  R QD     +R R    R+    NVS    P K  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  
Subjt:  RHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA

Query:  GLVIEGQTGKGILAQLADYFSILINFF
        GLVIE QTGKGILAQLA Y+S +++ F
Subjt:  GLVIEGQTGKGILAQLADYFSILINFF

AT4G28025.2 unknown protein.

2.4e-26

52.59

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Query:  PPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA
        PP  +L    +  S++  R G  R QD     +R R    R+    NVS    P K  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGA
Subjt:  PPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRI---SNVS----PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA

Query:  WAMIGLTAGLVIEGQTGKGILAQLADYFSILINFF
        WA+IGL  GLVIE QTGKGILAQLA Y+S +++ F
Subjt:  WAMIGLTAGLVIEGQTGKGILAQLADYFSILINFF

Sequences

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CDS sequence

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ATGTGGGCATCTGAAATCTATAAATGGATAAGCATTCATGCAAGAAAAAGTTGCACTTTGGAGATGGCTGCTGCTTCTGCTTCGCTGATTCTCCCCATCAATGGAGGAAA
CCTTCCGCCTTCCCAATACCTCTCTTTCCGCCATAGTCACCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGACCAAGATGTTGGCAGAAGTACCCACAGAACGA
GGGGTCAAGCATTTCGAATCTCTAATGTCTCGCCTGCTAAAGATGGGTTAATCAAACAGGTGATTATGGTAGACCCCTTGGAAGCCAAACGTATGGCGGCAAAAGAAATG
GAAAAGATCAAAGCGAAAGAGAAATTCAAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCAAAC
CGGAAAAGGAATTCTAGCACAGTTGGCCGACTACTTCAGCATCCTTATCAACTTCTTCATACGGTAG

mRNA sequence

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ATCCGTTTGGTTGGATTAAAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCGTTCTCTATAAGATAAAGTGTTGAATGTGGGCATCTGAAATCTATA
AATGGATAAGCATTCATGCAAGAAAAAGTTGCACTTTGGAGATGGCTGCTGCTTCTGCTTCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTC
TCTTTCCGCCATAGTCACCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGACCAAGATGTTGGCAGAAGTACCCACAGAACGAGGGGTCAAGCATTTCGAATCTC
TAATGTCTCGCCTGCTAAAGATGGGTTAATCAAACAGGTGATTATGGTAGACCCCTTGGAAGCCAAACGTATGGCGGCAAAAGAAATGGAAAAGATCAAAGCGAAAGAGA
AATTCAAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCAAACCGGAAAAGGAATTCTAGCACAG
TTGGCCGACTACTTCAGCATCCTTATCAACTTCTTCATACGGTAGAAGCATCTTCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGCAGTGAGATGAAGAAGCAGGTTC
CAACGGTCTTTGTTTTGAAGGATTCTATTGGCAATACAATTAAATGTACTACCATTTTTTTAAAATATTCTCCTCTTGTGAAGTCTATAAGCTTGAATGATTCAAGATTA
ATTAATTAATTATATTC

Protein sequence

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MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEM
EKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILINFFIR

IVF0027030 (gene) of Melon (IVF77) v1 genome