; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0027045 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0027045
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyadenylate-binding protein 1-like
Genome locationchr07:21521784..21527404
RNA-Seq ExpressionIVF0027045
SyntenyIVF0027045
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146890.2 polyadenylate-binding protein 1 isoform X2 [Cucumis sativus]4.09e-15498.26Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

XP_008453839.1 PREDICTED: polyadenylate-binding protein 1-like isoform X2 [Cucumis melo]2.77e-159100Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

XP_008453840.1 PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo]7.34e-15799.57Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

XP_011653101.1 polyadenylate-binding protein 1 isoform X1 [Cucumis sativus]1.55e-15698.7Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

XP_038876136.1 polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida]4.40e-15698.26Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME N+NYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPF P APYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

TrEMBL top hitse value%identityAlignment
A0A0A0KXP6 RRM domain-containing protein2.3e-12098.26Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

A0A1S3BWP8 polyadenylate-binding protein 2-like isoform X15.4e-12299.57Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X27.5e-124100Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPYPSYGYGRVPRFRRPMRYRPY

A0A6J1FT42 polyadenylate-binding protein 1-like isoform X11.2e-11695.69Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        ME N+NYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY DAEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP+GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFR

Query:  GRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY
        GRRPF   AP YPSYGYGRVPRFRRPMRYRPY
Subjt:  GRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY

A0A6J1J6L4 polyadenylate-binding protein 1-like isoform X12.6e-11694.37Show/hide
Query:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        M+RN+NYDEH+HEVYGGDIPDDAEMDADLDMSSGRADEE YDAEPS+ANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
         DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRTNVPGMKQ+RGRRPN FGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFTPTAPY-PSYGYGRVPRFRRPMRYRPY
        RRPF P+AP+ PSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAPY-PSYGYGRVPRFRRPMRYRPY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 25.7e-3653.18Show/hide
Query:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        D +  +   K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPNPFGFRGR-RPFTP
        GHPKGFAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM       + RGR     G+RGR R F P
Subjt:  GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPNPFGFRGR-RPFTP

Q28165 Polyadenylate-binding protein 21.6e-3048.15Show/hide
Query:  DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQA--EKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAY
        +LE +K R++E+EEEA  L+E+Q +VEK+M       ++     +  EK E D+RS+YVGNVDY  T EE++ HF  CG+VNRVTIL DKF GHPKGFAY
Subjt:  DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQA--EKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAY

Query:  VEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK---------QYRGRRPNPFGFRGR
        +EF + ++V+ +L L+ES   GRQ+KV  KRTN PG+          +YR R  N    R R
Subjt:  VEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK---------QYRGRRPNPFGFRGR

Q93VI4 Polyadenylate-binding protein 14.9e-8072.29Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG

Query:  RRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY
         R F P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY

Q9FJN9 Polyadenylate-binding protein 24.3e-7669.2Show/hide
Query:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY
        +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+
Subjt:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFTP
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPF  
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFTP

Query:  TAPYPSYGYGRVPRFRRPMRYRPY
           Y  YGYG+ PRFRRPMRY PY
Subjt:  TAPYPSYGYGRVPRFRRPMRYRPY

Q9LX90 Polyadenylate-binding protein 39.0e-7469.6Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FTPTAPYPSYGYGRVPRFRRPMRYRPY
        F P   Y  YGYG+ PRFRRPMRY PY
Subjt:  FTPTAPYPSYGYGRVPRFRRPMRYRPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-7569.6Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FTPTAPYPSYGYGRVPRFRRPMRYRPY
        F P   Y  YGYG+ PRFRRPMRY PY
Subjt:  FTPTAPYPSYGYGRVPRFRRPMRYRPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-6869.01Show/hide
Query:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRP
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRP

Query:  FTPTAPYPSYGYG
        F P   Y  YGYG
Subjt:  FTPTAPYPSYGYG

AT5G51120.1 polyadenylate-binding protein 13.5e-8172.29Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRG

Query:  RRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY
         R F P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  RRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY

AT5G51120.2 polyadenylate-binding protein 19.9e-7661.42Show/hide
Query:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                
Subjt:  YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------

Query:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE
                            ++  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNE
Subjt:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE

Query:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY
        SELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R F P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-7769.2Show/hide
Query:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY
        +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+
Subjt:  DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVY

Query:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFTP
        VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPF  
Subjt:  VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFTP

Query:  TAPYPSYGYGRVPRFRRPMRYRPY
           Y  YGYG+ PRFRRPMRY PY
Subjt:  TAPYPSYGYGRVPRFRRPMRYRPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGCAATTATAACTACGACGAGCACGAACACGAAGTCTACGGTGGGGATATTCCCGACGACGCCGAGATGGATGCCGACCTCGACATGTCTTCTGGTAGGGCCGA
CGAAGAAGGCTACGACGCCGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGC
AGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAAT
GTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGGACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCCAAGGGATTTGC
TTATGTTGAGTTTGTGGAGGTTGATGCTGTCCAGAATGCTTTGCTGTTAAATGAGTCAGAGTTGCACGGTCGTCAACTTAAGGTCTCTGCTAAAAGGACAAATGTGCCGG
GCATGAAGCAATACCGCGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCACGCCTACTGCACCTTATCCTTCATATGGTTATGGAAGGGTCCCAAGG
TTCAGGCGACCGATGCGGTACAGACCCTACTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAGAAAAAAAGATAATATGAAAAGAAGAGTCGGAGACAGGATCCGAAACCTAATCTTGATTCAATTGGGAGCCAAATACACAACACTTACCAACCATCGATC
GAGGGGCCACCGGAGTCGGAATCGGAGACGGAGATGGAGCGCAATTATAACTACGACGAGCACGAACACGAAGTCTACGGTGGGGATATTCCCGACGACGCCGAGATGGA
TGCCGACCTCGACATGTCTTCTGGTAGGGCCGACGAAGAAGGCTACGACGCCGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGA
TCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAG
GAAGTAGATTCTCGATCTGTATATGTTGGTAATGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGGACAGTGAATAGAGTGACAATTTT
GACGGACAAATTTGGTCACCCCAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCTGTCCAGAATGCTTTGCTGTTAAATGAGTCAGAGTTGCACGGTCGTCAAC
TTAAGGTCTCTGCTAAAAGGACAAATGTGCCGGGCATGAAGCAATACCGCGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCACGCCTACTGCACCT
TATCCTTCATATGGTTATGGAAGGGTCCCAAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAGGAGATACAATGCTCGTACTACCGCAAAATTATTGTTTGGGATCT
AGTGTTCCTTCGACTCAATGGTGTTTTTACCATCTCTATAACTTGGAGGGTGTGGAAAACATTGTACTTTATTGATGTTTCAACAGTCCCAATTGAGTTTCTTATGAACT
TGGTAGCAGTTTGTAGCTTTGAGGGGGTAAAAGATTTGTGGACTGGTTAACAATTTGTTGGCTCTGGAAGGGCTGAAAAAACCATGTTATCATCAACCATAAGAGAATTT
GGAAGAAAGAAAATTAAGGAGATTAAAGGACATAGAATTCTTGTGTATGATGAATTGGAACTGATCAGGATGTAGAATTCTTTGTTATTTAAGAAGCAATTATAAGTTGA
TATGA
Protein sequenceShow/hide protein sequence
MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGN
VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPR
FRRPMRYRPY