; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000125 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000125
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr4:97574..98914
RNA-Seq ExpressionLag0000125
SyntenyLag0000125
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-2059.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC MST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M + + K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-2059.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]1.7e-2059.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-2058.18Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSR+KRK S+ INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.0e-2058.18Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TN+Q KR+M + + K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein4.9e-2159.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC MST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M + + K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
A0A5A7TQ06 Retrotransposon gag protein8.3e-2159.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
A0A5A7U974 Retrotransposon gag protein1.1e-2058.18Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSR+KRK S+ INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
A0A5D3BBF9 Gag protease polyprotein8.3e-2159.09Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TNDQ +R+M +L+ K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
A0A5D3D209 Retrotransposon gag protein2.4e-2058.18Show/hide
Query:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+TN+Q KR+M + + K F E N   K+ S +PSRMKRK SV INTEGSL V   F
Subjt:  MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHF

Query:  AAVPSSKFEG
            +   EG
Subjt:  AAVPSSKFEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTTGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGACTAAGTGTCTCGACATCGAAGAAAAGTCGACCTTC
AACATCTGTTTTTTATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGCGGCAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCTTCCAAGTTTGAAGGT
TCTCACGTCGCTTCACTGCAGTTCCTTCTCCCCAAATTCGAAGGTTCTCACGTTGCTTCGCTACAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCAGGCGTTTCGCTGCAA
TTCCTTCTCCCTAAGTTCGAAGGTTCTCACGCGTTTTGCTCCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGCTGCAGTTTCTTCTCTCCAAGTTCGAAG
GTTCTCACGCGCTTCGCAGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCAGTAGTTCCTTCTCCCCAAGTTCGAAGGTTTTCACGCGCTTCACTCCAG
TTCCTTCTCTCCAAGTTTGAAGGTTCTCACGGGTTTCGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCGCTATTGCGCTGCTTCATTCTCCAAGTTGGA
AAAAAATTATGAACTACGTTTCTATTTCTTGAAGAGGCGCGACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTTGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGACTAAGTGTCTCGACATCGAAGAAAAGTCGACCTTC
AACATCTGTTTTTTATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGCGGCAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCTTCCAAGTTTGAAGGT
TCTCACGTCGCTTCACTGCAGTTCCTTCTCCCCAAATTCGAAGGTTCTCACGTTGCTTCGCTACAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCAGGCGTTTCGCTGCAA
TTCCTTCTCCCTAAGTTCGAAGGTTCTCACGCGTTTTGCTCCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGCTGCAGTTTCTTCTCTCCAAGTTCGAAG
GTTCTCACGCGCTTCGCAGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCAGTAGTTCCTTCTCCCCAAGTTCGAAGGTTTTCACGCGCTTCACTCCAG
TTCCTTCTCTCCAAGTTTGAAGGTTCTCACGGGTTTCGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCTGCGCTATTGCGCTGCTTCATTCTCCAAGTTGGA
AAAAAATTATGAACTACGTTTCTATTTCTTGAAGAGGCGCGACACTTGA
Protein sequenceShow/hide protein sequence
MSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTNDQPKRKMDNLELKLFDEVNSGKKLQSSIPSRMKRKFSVLINTEGSLKVLTHFAAVPSSKFEG
SHVASLQFLLPKFEGSHVASLQFLLSKFEGSQAFRCNSFSLSSKVLTRFAPVPSLQVRRFSRVSLQFLLSKFEGSHALRSSSFSPSSKVLMRFAVVPSPQVRRFSRASLQ
FLLSKFEGSHGFRCSSFSPSSKVLTLRYCAASFSKLEKNYELRFYFLKRRDT