; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000132 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000132
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationchr4:254809..256124
RNA-Seq ExpressionLag0000132
SyntenyLag0000132
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4108959.1 hypothetical protein GLYMA_U009702v4 [Glycine max]1.5e-6593.28Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
        FRPDRPAEA LG+KKRGSAPLPIHGI+    S+P
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
TKY45733.1 putative ART2 [Spatholobus suberectus]1.1e-6592.59Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNPR
        FRPDRPAEAGLG+KKRGSAP PIHGI ++R+ + R
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNPR
XP_022973211.1 uncharacterized protein LOC111471770, partial [Cucurbita maxima]5.1e-6698.43Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
        FRPDRPAEAGLG+KKRGSAPLPIHGI+
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
XP_022975571.1 uncharacterized protein LOC111475116, partial [Cucurbita maxima]5.1e-6698.43Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
        FRPDRPAEAGLG+KKRGSAPLPIHGI+
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
XP_024924841.1 uncharacterized protein LOC112489922 [Ziziphus jujuba]1.9e-6597.64Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
        F PDRPAEAGLG+KKRGSAPLPIHGI+
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
TrEMBL top hitse value%identityAlignment
A0A0R0GH42 Uncharacterized protein7.2e-6693.28Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
        FRPDRPAEA LG+KKRGSAPLPIHGI+    S+P
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
A0A0R0GH91 Uncharacterized protein7.2e-6693.28Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
        FRPDRPAEA LG+KKRGSAPLPIHGI+    S+P
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
A0A0R0GHT3 Uncharacterized protein7.2e-6693.28Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
        FRPDRPAEA LG+KKRGSAPLPIHGI+    S+P
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGINVARVSNP
A0A6J1IDC9 uncharacterized protein LOC1114717702.5e-6698.43Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
        FRPDRPAEAGLG+KKRGSAPLPIHGI+
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
A0A6J1IEK3 uncharacterized protein LOC1114751162.5e-6698.43Show/hide
Query:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
        MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV
Subjt:  MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNV

Query:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
        FRPDRPAEAGLG+KKRGSAPLPIHGI+
Subjt:  FRPDRPAEAGLGTKKRGSAPLPIHGIN
SwissProt top hitse value%identityAlignment
Q3E811 Regulator of rDNA transcription protein 158.3e-1176.09Show/hide
Query:  VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSP
        V I T NQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSP
Subjt:  VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSP
Q8TGM7 Putative uncharacterized protein ART23.0e-1676.79Show/hide
Query:  VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRP
        V I T NQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSPPDNVF PD+P
Subjt:  VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRP
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAA
ATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTC
TCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGCCGAGGCAGGC
CTTGGGACCAAAAAGAGGGGCAGTGCCCCGCTTCCGATTCACGGAATAAACGTGGCTCGTGTGTCAAATCCTCGGCCTCCTGAGATTTCTTTTGTAGCGGAAAAATTCAC
AGCATCCATGGCTGGAAACGGCTCGTTCGATTGGGCGGACAAGTGGGACTACAGCGACTCGAAGGACGTAGTCACCCACAACAATAACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAA
ATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTC
TCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGCCGAGGCAGGC
CTTGGGACCAAAAAGAGGGGCAGTGCCCCGCTTCCGATTCACGGAATAAACGTGGCTCGTGTGTCAAATCCTCGGCCTCCTGAGATTTCTTTTGTAGCGGAAAAATTCAC
AGCATCCATGGCTGGAAACGGCTCGTTCGATTGGGCGGACAAGTGGGACTACAGCGACTCGAAGGACGTAGTCACCCACAACAATAACAAGTAG
Protein sequenceShow/hide protein sequence
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRPAEAG
LGTKKRGSAPLPIHGINVARVSNPRPPEISFVAEKFTASMAGNGSFDWADKWDYSDSKDVVTHNNNK