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Lag0000133 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000133
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr4:256251..256916
RNA-Seq ExpressionLag0000133
SyntenyLag0000133
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8363055.1 hypothetical protein BUALT_BualtUnG0008900 [Buddleja alternifolia]2.4e-4984Show/hide
Query:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA
        GRDESER+RAESQ IVAARPLC LQYPVAYLSRLQRILP ARWEL +KAA A  P RGL QRHVPLGA  PLL VG R     VASSPDSDLEAFSHNPA
Subjt:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTNCANQRFLSY
        HGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  HGSFAPLAFQPSAMTNCANQRFLSY

KAG8363060.1 hypothetical protein BUALT_BualtUnG0009600 [Buddleja alternifolia]2.4e-4984Show/hide
Query:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA
        GRDESER+RAESQ IVAARPLC LQYPVAYLSRLQRILP ARWEL +KAA A  P RGL QRHVPLGA  PLL VG R     VASSPDSDLEAFSHNPA
Subjt:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTNCANQRFLSY
        HGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  HGSFAPLAFQPSAMTNCANQRFLSY

KAG8375836.1 hypothetical protein BUALT_Bualt09G0000500 [Buddleja alternifolia]6.4e-5080.45Show/hide
Query:  RNKWVLCVGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDL
        R  W+ C G DESER+RAESQ IVAARPLC LQYPVAYLSRLQRILP ARWEL +KAA A  P RGL QRHVPLGA  PLL VG R     VASSPDSDL
Subjt:  RNKWVLCVGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDL

Query:  EAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY
        EAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  EAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY

OPH47798.1 hypothetical protein B4U81_25600, partial [Vibrio campbellii]2.1e-4881.25Show/hide
Query:  LCVGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSH
        +   R  S RRRAESQ IVAARPLC LQYPVAYLSRLQRILP ARWEL + A  A  P  GL QRHVPLGA RPLLLVG RA  ACVASSPDSDLEAFSH
Subjt:  LCVGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSH

Query:  NPAHGSFAPLAFQPSAMTNCANQRFLSY
        NPAHGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  NPAHGSFAPLAFQPSAMTNCANQRFLSY

TXG51762.1 hypothetical protein EZV62_024286 [Acer yangbiense]5.4e-4982.68Show/hide
Query:  VGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACV-ASSPDSDLEAFSHN
        +GRDESER RAESQWIVAARPLCHLQYPVAYLSRLQRILP ARWELR+KAA A  P  GL QRHVPLG  R LL VG RA       SSPDSDLEAFSHN
Subjt:  VGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACV-ASSPDSDLEAFSHN

Query:  PAHGSFAPLAFQPSAMTNCANQRFLSY
        PAHGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  PAHGSFAPLAFQPSAMTNCANQRFLSY

TrEMBL top hitse value%identityAlignment
A0A1Q3DGA9 Uncharacterized protein (Fragment)1.1e-4783.87Show/hide
Query:  RDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPAH
        RDESER+RAESQ IVAAR LCHLQYPVAYLSRL+RILP A    R+KAA    PSRGL QRHVPLG  RPLLLVG RA  ACVASSPDSDLEAFSHNPAH
Subjt:  RDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPAH

Query:  GSFAPLAFQPSAMTNCANQRFLSY
        GSFAPLAFQPSAMTNCANQRFLSY
Subjt:  GSFAPLAFQPSAMTNCANQRFLSY

A0A2G2UUV0 Uncharacterized protein1.1e-4776.47Show/hide
Query:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGA-----------GRPLLLVGNRAMSACVASSPD
        GRD+ ER+RAESQWIVAARPLCHLQYPVAYLSRLQRILP ARW+L +KAA AT   R LSQ+HVPLGA            RPLL VG R   ACVASSPD
Subjt:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGA-----------GRPLLLVGNRAMSACVASSPD

Query:  SDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY
        SDLEAFSHNPAHGSFAPLAFQPSAMTN  NQRFLSY
Subjt:  SDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY

A0A5C7H5R6 Uncharacterized protein2.6e-4982.68Show/hide
Query:  VGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACV-ASSPDSDLEAFSHN
        +GRDESER RAESQWIVAARPLCHLQYPVAYLSRLQRILP ARWELR+KAA A  P  GL QRHVPLG  R LL VG RA       SSPDSDLEAFSHN
Subjt:  VGRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACV-ASSPDSDLEAFSHN

Query:  PAHGSFAPLAFQPSAMTNCANQRFLSY
        PAHGSFAPLAFQPSAMTNCANQRFLSY
Subjt:  PAHGSFAPLAFQPSAMTNCANQRFLSY

A0A6A1V4X9 Uncharacterized protein1.9e-4786.21Show/hide
Query:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA
        GRDES+R RAESQWIVAARPLCHLQYPVAYLSRLQRILP ARWEL +KAA A  P RGL QRHVPLGAG PLL VGNRA  A VASSPDSDLEAFSHNP 
Subjt:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTN
        HGSFAPLAFQPSAMTN
Subjt:  HGSFAPLAFQPSAMTN

A0A6A1VJA4 Uncharacterized protein1.9e-4786.21Show/hide
Query:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA
        GRDES+R RAESQWIVAARPLCHLQYPVAYLSRLQRILP ARWEL +KAA A  P RGL QRHVPLGAG PLL VGNRA  A VASSPDSDLEAFSHNP 
Subjt:  GRDESERRRAESQWIVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPA

Query:  HGSFAPLAFQPSAMTN
        HGSFAPLAFQPSAMTN
Subjt:  HGSFAPLAFQPSAMTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTGGCCTTGGCATGCATGCGAGCGCCCCGCCATCGCATGCCATGCATTCTCCTCGTCAACACCCACGCCCACGCCCATGCATCATCACCCATGCTAACCTCTCA
GATGTTTTTGCTACATCATTGGGCGCCCATGTGCACGCCTAAGCCACGAGCCTTGGCATGCATACGACCACCCTTGCATCCATGCACGTTCGTTCTCCAACACTTAGCGT
GCGTGTTGGCCTTTGCTTACCCTATAACCTCCATGACACTTGGAAGAAATAAATGGGTTTTATGTGTGGGGAGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGG
ATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCATCGCTCGGTGGGAATTACGTTACAAGGCGGCCCC
CGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGAAGGCCCCTACTGCTGGTCGGCAATCGAGCGATGAGCGCATGCGTCGCTTCTAGCC
CGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCG
TACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTGGCCTTGGCATGCATGCGAGCGCCCCGCCATCGCATGCCATGCATTCTCCTCGTCAACACCCACGCCCACGCCCATGCATCATCACCCATGCTAACCTCTCA
GATGTTTTTGCTACATCATTGGGCGCCCATGTGCACGCCTAAGCCACGAGCCTTGGCATGCATACGACCACCCTTGCATCCATGCACGTTCGTTCTCCAACACTTAGCGT
GCGTGTTGGCCTTTGCTTACCCTATAACCTCCATGACACTTGGAAGAAATAAATGGGTTTTATGTGTGGGGAGGGACGAATCGGAGCGACGAAGGGCTGAATCTCAGTGG
ATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCTGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCATCGCTCGGTGGGAATTACGTTACAAGGCGGCCCC
CGCGACTCATCCGTCACGAGGGCTTAGCCAACGACACGTGCCTTTGGGGGCCGGAAGGCCCCTACTGCTGGTCGGCAATCGAGCGATGAGCGCATGCGTCGCTTCTAGCC
CGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCG
TACTAG
Protein sequenceShow/hide protein sequence
MPLALACMRAPRHRMPCILLVNTHAHAHASSPMLTSQMFLLHHWAPMCTPKPRALACIRPPLHPCTFVLQHLACVLAFAYPITSMTLGRNKWVLCVGRDESERRRAESQW
IVAARPLCHLQYPVAYLSRLQRILPIARWELRYKAAPATHPSRGLSQRHVPLGAGRPLLLVGNRAMSACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLS
Y