CuGenDBv2

Gene ID	Lag0000138
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	E3 ubiquitin-protein ligase SHPRH
Genome location	chr4:387118..388627
RNA-Seq Expression	Lag0000138
Synteny	Lag0000138
Gene Ontology terms	GO:0005524 - ATP binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022134046.1 E3 ubiquitin-protein ligase SHPRH [Momordica charantia]

1.3e-28

91.89

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKS TAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

XP_022938762.1 E3 ubiquitin-protein ligase SHPRH isoform X2 [Cucurbita moschata]

3.7e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

XP_022938767.1 E3 ubiquitin-protein ligase SHPRH isoform X7 [Cucurbita moschata]

3.7e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

XP_022938769.1 E3 ubiquitin-protein ligase SHPRH isoform X9 [Cucurbita moschata]

3.7e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

XP_022992999.1 E3 ubiquitin-protein ligase SHPRH isoform X1 [Cucurbita maxima]

3.7e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BYG6 E3 ubiquitin-protein ligase SHPRH

6.1e-29

91.89

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKS TAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

A0A6J1FKQ5 E3 ubiquitin-protein ligase SHPRH isoform X9

1.8e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

A0A6J1JXA7 E3 ubiquitin-protein ligase SHPRH isoform X1

1.8e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

A0A6J1JXB2 E3 ubiquitin-protein ligase SHPRH isoform X5

1.8e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

A0A6J1JZ10 E3 ubiquitin-protein ligase SHPRH isoform X4

1.8e-28

89.19

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK
        I AVVRRILWIKYTDS+AKVLVFSSWNDVLDVLQYAFAAN ITF+RMKGGRKSHTAISEF GQKINAKE+HK +
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNK

SwissProt top hits

e value

%identity

Alignment

Q149N8 E3 ubiquitin-protein ligase SHPRH

5.0e-04

36.67

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEF
        + AVVR ++ I+  D  AK LVFS+W DVLD++  A   N + F ++   +     +S F
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEF

Q7TPQ3 E3 ubiquitin-protein ligase SHPRH

6.6e-04

36.67

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEF
        + AVVR ++ I+  D  AK LVFS+W DVLD++  A   N + F ++   +     +S F
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEF

Q9UTL9 Uncharacterized ATP-dependent helicase C144.05

2.9e-07

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Query:  EDYGD-IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQK
        E +G  I  + + +L++K+ +   KV+VFS W DVLDVL  +F ANGI FIR   G+  +T +  F  ++
Subjt:  EDYGD-IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQK

Arabidopsis top hits

e value

%identity

Alignment

AT2G40770.1 zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding

4.7e-21

58.54

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Query:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNKHRHSHVEL
        I AV RRILWIK +D + KVLVFSSWNDVLDVL++AFAAN IT IRMKGGRKS TAIS+F G +   ++++ ++     +++
Subjt:  IGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNKHRHSHVEL

Sequences

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CDS sequence

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ATGACGCCGAAACCTGCTGTGGACTCGCCGGAAGGGAAGAAGATCACGAGTTTGGTGCTATTGGACTCGCCGGACGATGGTCGGACTGAGGACTACGGAGATATTGGAGC
GGTTGTAAGACGAATCTTGTGGATCAAGTATACAGATTCCAAAGCAAAAGTTCTTGTTTTCTCTAGTTGGAACGATGTTCTTGATGTTTTGCAATATGCCTTTGCCGCGA
ACGGCATTACCTTCATCAGGATGAAAGGAGGCAGAAAATCTCATACAGCCATTAGTGAATTTAGTGGACAAAAGATCAATGCAAAAGAAAGTCACAAGAACAAGCATCGA
CACAGTCATGTAGAGCTTTCACCATAG

mRNA sequence

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Protein sequence

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MTPKPAVDSPEGKKITSLVLLDSPDDGRTEDYGDIGAVVRRILWIKYTDSKAKVLVFSSWNDVLDVLQYAFAANGITFIRMKGGRKSHTAISEFSGQKINAKESHKNKHR
HSHVELSP

Lag0000138 (gene) of Sponge gourd (AG-4) v1 genome