; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000141 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000141
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:410371..410967
RNA-Seq ExpressionLag0000141
SyntenyLag0000141
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]4.1e-4854.02Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   + + S K+EF+E EA  + HPHNDALV+ L IANAKVHRIL+DGGSS D+ S TA+ AM LG + L+ S T L+GFGGE++ P+G +ELP+ F  
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
          ++ITRM++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFPT  GVG + G+Q++S+ECY+ ++R  D+
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]3.5e-4753.45Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   ++E   K+EF E E   + HPHNDALV+ L IANAKVH IL+DGGSS D++S TA+  M LG   L+ SP  LVGFGGE + P G +ELPV FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G ++IT+M++FLVVD   + NAILGRPT+H LKA+ S YHQ +KFPT  G+G + G+Q++S+ECY+ +++  D+
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]8.3e-4955.17Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   +      +EF+E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S TA+ AM LG   L+ SP  LVGFGGE++   G +ELPV FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G +++T+M++FLVV+   +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + G+Q++S+ECY  ++R+ DR
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.2e-4754.71Show/hide
Query:  LLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGEGSQT
        +++E   KLEF+E EA  + HPHNDALV+ L IANAKVHRIL+DGGSS  ++S TA+ AM LG   L+ SP  LVGFGGE++ P G +ELPVMFG G ++
Subjt:  LLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGEGSQT

Query:  ITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        I +M++FLVV    +YN ILGRP +H LK + STYHQ +KFPT  G+G + G+Q++ +ECY  +++  DR
Subjt:  ITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.2e-4753.45Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   + + S  +EF+E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S T +  M LG   L+ SP  L+GFG E++ P G +EL V FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G +++T+M++FLVVD   +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + G+Q++S+ECY+ ++R  DR
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.0e-4854.02Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   + + S K+EF+E EA  + HPHNDALV+ L IANAKVHRIL+DGGSS D+ S TA+ AM LG + L+ S T L+GFGGE++ P+G +ELP+ F  
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
          ++ITRM++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFPT  GVG + G+Q++S+ECY+ ++R  D+
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

A0A6J1DAK4 uncharacterized protein LOC1110189021.7e-4753.45Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   ++E   K+EF E E   + HPHNDALV+ L IANAKVH IL+DGGSS D++S TA+  M LG   L+ SP  LVGFGGE + P G +ELPV FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G ++IT+M++FLVVD   + NAILGRPT+H LKA+ S YHQ +KFPT  G+G + G+Q++S+ECY+ +++  D+
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

A0A6J1DP33 uncharacterized protein LOC1110228865.8e-4854.71Show/hide
Query:  LLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGEGSQT
        +++E   KLEF+E EA  + HPHNDALV+ L IANAKVHRIL+DGGSS  ++S TA+ AM LG   L+ SP  LVGFGGE++ P G +ELPVMFG G ++
Subjt:  LLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGEGSQT

Query:  ITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        I +M++FLVV    +YN ILGRP +H LK + STYHQ +KFPT  G+G + G+Q++ +ECY  +++  DR
Subjt:  ITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223214.0e-4955.17Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   +      +EF+E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S TA+ AM LG   L+ SP  LVGFGGE++   G +ELPV FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G +++T+M++FLVV+   +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + G+Q++S+ECY  ++R+ DR
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

A0A6J1DXV4 uncharacterized protein LOC1110251475.8e-4853.45Show/hide
Query:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE
        +Y   + + S  +EF+E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S T +  M LG   L+ SP  L+GFG E++ P G +EL V FG 
Subjt:  MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGE

Query:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR
        G +++T+M++FLVVD   +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + G+Q++S+ECY+ ++R  DR
Subjt:  GSQTITRMINFLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGCTCCTACTCGATGAAAACTCACCAAAATTGGAGTTTACAGAGAAGGAGGCCGTGGGGATGCGCCATCCACACAACGACGCACTGGTGGTCATCCTAACGAT
TGCCAACGCAAAAGTTCACCGAATCCTCATTGATGGGGGAAGTTCTGCCGATGTGCTCTCAACCACTGCGTTCGATGCCATGAAGCTGGGGAGTGATCGTCTGAGGCCGA
GCCCCACGTCGCTAGTAGGTTTCGGAGGGGAAAAATTAAGTCCGAGAGGAAGCGTTGAGCTGCCCGTGATGTTTGGGGAAGGATCGCAAACAATAACGAGAATGATCAAC
TTCCTGGTGGTAGACTGCGTCCCGACATATAATGCCATCCTAGGACGACCCACCCTACATGGGCTCAAAGCTGTAGCTTCAACCTACCACCAAGTCCTGAAATTTCCAAC
CGAAGAAGGTGTAGGGGTGGTGCATGGCAAGCAAAAGATGTCAAAGGAATGCTACTTTATGGCGCTCAGGAACATCGACAGAAAAGTTCAAGCGACGTCGGCCTCGGTCG
GCCGAGCATTTGAGGGATCAAGTCATCCTCTTCCAATGGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGCTCCTACTCGATGAAAACTCACCAAAATTGGAGTTTACAGAGAAGGAGGCCGTGGGGATGCGCCATCCACACAACGACGCACTGGTGGTCATCCTAACGAT
TGCCAACGCAAAAGTTCACCGAATCCTCATTGATGGGGGAAGTTCTGCCGATGTGCTCTCAACCACTGCGTTCGATGCCATGAAGCTGGGGAGTGATCGTCTGAGGCCGA
GCCCCACGTCGCTAGTAGGTTTCGGAGGGGAAAAATTAAGTCCGAGAGGAAGCGTTGAGCTGCCCGTGATGTTTGGGGAAGGATCGCAAACAATAACGAGAATGATCAAC
TTCCTGGTGGTAGACTGCGTCCCGACATATAATGCCATCCTAGGACGACCCACCCTACATGGGCTCAAAGCTGTAGCTTCAACCTACCACCAAGTCCTGAAATTTCCAAC
CGAAGAAGGTGTAGGGGTGGTGCATGGCAAGCAAAAGATGTCAAAGGAATGCTACTTTATGGCGCTCAGGAACATCGACAGAAAAGTTCAAGCGACGTCGGCCTCGGTCG
GCCGAGCATTTGAGGGATCAAGTCATCCTCTTCCAATGGAGCATTGA
Protein sequenceShow/hide protein sequence
MYSLLLDENSPKLEFTEKEAVGMRHPHNDALVVILTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSDRLRPSPTSLVGFGGEKLSPRGSVELPVMFGEGSQTITRMIN
FLVVDCVPTYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGVVHGKQKMSKECYFMALRNIDRKVQATSASVGRAFEGSSHPLPMEH