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Lag0000146 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000146
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:487301..497183
RNA-Seq ExpressionLag0000146
SyntenyLag0000146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19300.1 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink).5.8e-0468.97Show/hide
Query:  DDLVIAGMLPLLDAPHHLRKHERGPCREG
        +DL   GMLP LDAPHHLRKHE    REG
Subjt:  DDLVIAGMLPLLDAPHHLRKHERGPCREG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAAACACAGGAGCCCTTACATGATCAAATCAATGAAAATACTCTTCATGGGTTAATCGACGTCGCCGTTGTTTGTCCATCGTGGATTGTCGCTAATCATCTACT
TCGCTTGGATGGTCTTGAAGGTGACAATACTATTAAGCTTGCTATTGATGATGAATGTGTGAGACGGAACAAAAAGGTTTTACGATCTGTTTGGGTGATTTTGGTAATAG
ATGACCTTGTCATTGCTGGGATGTTGCCCCTGCTTGATGCTCCTCACCATTTGCGCAAGCATGAACGGGGTCCCTGTCGAGAAGGTTCTTCAAGTTTGATGTACGAACAA
GATTATGGTGACAGGGATGAAAGCGGCATAAAAACAGCAGCCAAGAACTCCTCTCCTTTGCTGGAAAATGATTACGACCACCACCACAATTGCACCGGTATTCTCTTAGG
GTTTTGCCCTCCACCTCTCAGATCTGAGGTATTTTCGCCGTTTTCGAATTCTTTCGACGGATCTGTGTCGGTGGCGGTGTATCCCTCTTATTCGCTCGAATCTGAGATGC
TATCGGTGAGACACCCTCGTCGTTTGGCTTCGACGATCTGGTTGTTTGCTGCTTCGTTATCCCCCTTCCTCTCTTTTGTCGCCCCGAAGATGGAGGACTGTCCCCCTTGC
CACTTCGAATCTCCTTTCGTCTCTTCGCCGCATCGAAGATGGAGGACTATTCTCCATGGTTGTTGGGGCTCGCATTTTCATTTCCAGATTCTACATAATCCGTCCACCAT
TCGACGAGGCCCGACAGGAGACTGGTTCGGGGATGAGAAGCTTGGTAGGGAGGCCGAAACGAGTGAAAAAATAGGTTCGATTAATCGTTTTCTTAAGGCCTATGATGAGG
AACCTGTTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAAACACAGGAGCCCTTACATGATCAAATCAATGAAAATACTCTTCATGGGTTAATCGACGTCGCCGTTGTTTGTCCATCGTGGATTGTCGCTAATCATCTACT
TCGCTTGGATGGTCTTGAAGGTGACAATACTATTAAGCTTGCTATTGATGATGAATGTGTGAGACGGAACAAAAAGGTTTTACGATCTGTTTGGGTGATTTTGGTAATAG
ATGACCTTGTCATTGCTGGGATGTTGCCCCTGCTTGATGCTCCTCACCATTTGCGCAAGCATGAACGGGGTCCCTGTCGAGAAGGTTCTTCAAGTTTGATGTACGAACAA
GATTATGGTGACAGGGATGAAAGCGGCATAAAAACAGCAGCCAAGAACTCCTCTCCTTTGCTGGAAAATGATTACGACCACCACCACAATTGCACCGGTATTCTCTTAGG
GTTTTGCCCTCCACCTCTCAGATCTGAGGTATTTTCGCCGTTTTCGAATTCTTTCGACGGATCTGTGTCGGTGGCGGTGTATCCCTCTTATTCGCTCGAATCTGAGATGC
TATCGGTGAGACACCCTCGTCGTTTGGCTTCGACGATCTGGTTGTTTGCTGCTTCGTTATCCCCCTTCCTCTCTTTTGTCGCCCCGAAGATGGAGGACTGTCCCCCTTGC
CACTTCGAATCTCCTTTCGTCTCTTCGCCGCATCGAAGATGGAGGACTATTCTCCATGGTTGTTGGGGCTCGCATTTTCATTTCCAGATTCTACATAATCCGTCCACCAT
TCGACGAGGCCCGACAGGAGACTGGTTCGGGGATGAGAAGCTTGGTAGGGAGGCCGAAACGAGTGAAAAAATAGGTTCGATTAATCGTTTTCTTAAGGCCTATGATGAGG
AACCTGTTCTGTGA
Protein sequenceShow/hide protein sequence
MPKTQEPLHDQINENTLHGLIDVAVVCPSWIVANHLLRLDGLEGDNTIKLAIDDECVRRNKKVLRSVWVILVIDDLVIAGMLPLLDAPHHLRKHERGPCREGSSSLMYEQ
DYGDRDESGIKTAAKNSSPLLENDYDHHHNCTGILLGFCPPPLRSEVFSPFSNSFDGSVSVAVYPSYSLESEMLSVRHPRRLASTIWLFAASLSPFLSFVAPKMEDCPPC
HFESPFVSSPHRRWRTILHGCWGSHFHFQILHNPSTIRRGPTGDWFGDEKLGREAETSEKIGSINRFLKAYDEEPVL