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Lag0000149 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000149
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S acidic ribosomal protein P1-like
Genome locationchr4:540436..541057
RNA-Seq ExpressionLag0000149
SyntenyLag0000149
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010519571.1 PREDICTED: 60S acidic ribosomal protein P1 [Tarenaya hassleriana]2.7e-2866.67Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPL--SMASSAADNAAPTPVQKKEEV
        M+T ELACTYAALILHD+ I VTA+KISALVKAA LTVESYWPSLFAKL  ++NIDDL+++VGS   AAPV AAAP   + A +AA++A     +KKEE 
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPL--SMASSAADNAAPTPVQKKEEV

Query:  MEESEDDMVFGLFD
         EES+DDM F LFD
Subjt:  MEESEDDMVFGLFD

XP_010525574.1 PREDICTED: 60S acidic ribosomal protein P1 [Tarenaya hassleriana]2.7e-2869.91Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEEVM
        M+T ELACTYAALILHD+ I VTA+KISALVKAA LTVESYWPSLFAKL  ++NIDDL+++VGS   AAPV AAAP   AS AA  AAP   + KKEE  
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEEVM

Query:  EESEDDMVFGLFD
        EES+DDM F LFD
Subjt:  EESEDDMVFGLFD

XP_012843499.1 PREDICTED: 60S acidic ribosomal protein P1-like [Erythranthe guttata]1.2e-2866.96Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MS  E+ACTYAALILHDD I VTA+KI+AL+KAA LTVESYWPSLFAKL  +RNI+DLV++VGS    A V  AAP   AS+AA  AAP   +KKEE  E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

XP_022138163.1 60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]8.1e-3374.07Show/hide
Query:  ELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESED
        ELACTYAALILHDD I+VTA+KI+ LVKAAGLTVESYWPSLFAKL+S+RNIDDL+L+VGSA+A+AP++ A+  S  +SAA   AP PV+KKEE +EESED
Subjt:  ELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESED

Query:  DMVFGLFD
        D+VFGLFD
Subjt:  DMVFGLFD

XP_022138164.1 60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]6.6e-3575Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MSTSELACTYAALILHDD I+VTA+KI+ LVKAAGLTVESYWPSLFAKL+S+RNIDDL+L+VGSA+A+AP++ A+  S  +SAA   AP PV+KKEE +E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ESEDD+VFGLFD
Subjt:  ESEDDMVFGLFD

TrEMBL top hitse value%identityAlignment
A0A218WRP2 60S acidic ribosomal protein P16.4e-2866.96Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MST E+ACTYA+LIL+DD I +TA+KI+ALVKAA + VESYWPSLFAKLA +RNI+DLV++VGS   AAPV AAAP   A  AA  AAP   +KKEE  E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

A0A218X3W3 60S acidic ribosomal protein P1-like3.8e-2866.07Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MST E+ACTYA+LILHDD I +TA+KI++LVKAA + VESYWPSLFAKLA +RN+DDLV++VGS   AAPV AAAP   A  AA  A P   +KKEE  E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

A0A6J1C9A3 60S acidic ribosomal protein P1-like isoform X23.2e-3575Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MSTSELACTYAALILHDD I+VTA+KI+ LVKAAGLTVESYWPSLFAKL+S+RNIDDL+L+VGSA+A+AP++ A+  S  +SAA   AP PV+KKEE +E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ESEDD+VFGLFD
Subjt:  ESEDDMVFGLFD

A0A6J1CC92 60S acidic ribosomal protein P1-like isoform X13.9e-3374.07Show/hide
Query:  ELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESED
        ELACTYAALILHDD I+VTA+KI+ LVKAAGLTVESYWPSLFAKL+S+RNIDDL+L+VGSA+A+AP++ A+  S  +SAA   AP PV+KKEE +EESED
Subjt:  ELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESED

Query:  DMVFGLFD
        D+VFGLFD
Subjt:  DMVFGLFD

A0A7N2MH30 Uncharacterized protein2.2e-2864.6Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        MST ELACTYA+L+LHDD I +T++KI+ LVKAAG++VESYWPSLFAKLA +R+IDDL+L+ GS  AAAPV  +AP   A  A   AAP   +KKEEV E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESED-DMVFGLFD
        ES+D D+ FGLFD
Subjt:  ESED-DMVFGLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-27.1e-2454.78Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE
        MST  ELAC+YA +IL D+ I +T+DKI+ LVKAAG+ +ESYWP LFAK+A +RN+ DL+++VG+      APV+AAAP +   +AA  AAP   +KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD

P47955 60S acidic ribosomal protein P16.0e-2357.52Show/hide
Query:  STSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMA--SSAADNAAPTPVQKKEEVM
        S SELAC Y+ALILHDD++TVT DKI+AL+KAAG++VE +WP LFAK  +  NI  L+ +VG A   AP   AAP   A  S+AA  A    V+ K+E  
Subjt:  STSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMA--SSAADNAAPTPVQKKEEVM

Query:  EESEDDMVFGLFD
        EESEDDM FGLFD
Subjt:  EESEDDMVFGLFD

P52855 60S acidic ribosomal protein P12.8e-2862.5Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME
        M++ ELAC YAALIL DD I +TA+KI+ +VKAA + VESYWP+LFAKL  +RN++DL+LSVGS   AAPV AAAP   A  AA  AAP   +KKEE  E
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

Q8LCW9 60S acidic ribosomal protein P1-16.0e-2355.26Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEV
        MST  ELAC+YA +IL D+ I +TADKI+ LVKAAG+++ESYWP LFAK+A +RN+ DL+++VG+     APV AAAP +   +AA  AA    +KK+E 
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEV

Query:  MEESEDDMVFGLFD
         EES+ D+ FGLFD
Subjt:  MEESEDDMVFGLFD

Q8LEQ0 60S acidic ribosomal protein P1-32.7e-2356.52Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE
        MST  ELAC+YA +IL D+ I +TADKI+ LVKAAG+T+ESYWP LFAK+A +RN+ DL+++VG+     APV AAAP +   +AA  AAP   + KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD

Arabidopsis top hitse value%identityAlignment
AT4G00810.1 60S acidic ribosomal protein family5.0e-2554.78Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE
        MST  ELAC+YA +IL D+ I +T+DKI+ LVKAAG+ +ESYWP LFAK+A +RN+ DL+++VG+      APV+AAAP +   +AA  AAP   +KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD

AT4G00810.2 60S acidic ribosomal protein family5.0e-2554.78Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE
        MST  ELAC+YA +IL D+ I +T+DKI+ LVKAAG+ +ESYWP LFAK+A +RN+ DL+++VG+      APV+AAAP +   +AA  AAP   +KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD

AT5G24510.1 60S acidic ribosomal protein family1.9e-2758.97Show/hide
Query:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE-
        MSTSELACTYAALILHDD I +TA+ IS LVK A + VESYWPSLFAKL  ++NIDDL+++VG+     A PVT AAP       A  +   P +KK E 
Subjt:  MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS--ASAAAPVTAAAPLSMASSAADNAAPTPVQKKEE-

Query:  --VMEESEDDMVFGLFD
          + EESEDDM+ GLFD
Subjt:  --VMEESEDDMVFGLFD

AT5G47700.1 60S acidic ribosomal protein family1.9e-2456.52Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE
        MST  ELAC+YA +IL D+ I +TADKI+ LVKAAG+T+ESYWP LFAK+A +RN+ DL+++VG+     APV AAAP +   +AA  AAP   + KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD

AT5G47700.2 60S acidic ribosomal protein family1.9e-2456.52Show/hide
Query:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE
        MST  ELAC+YA +IL D+ I +TADKI+ LVKAAG+T+ESYWP LFAK+A +RN+ DL+++VG+     APV AAAP +   +AA  AAP   + KK+E
Subjt:  MST-SELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGS-ASAAAPVTAAAPLSMASSAADNAAPTPVQ-KKEE

Query:  VMEESEDDMVFGLFD
          EES+ D+ FGLFD
Subjt:  VMEESEDDMVFGLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGACGACGACATCACCGTCACTGCCGACAAGATCTCCGCATTGGTGAAGGCTGCCGGCCTTAC
CGTCGAATCCTACTGGCCCTCTCTCTTCGCTAAGCTGGCCTCACAAAGGAACATCGACGATCTCGTTCTCAGCGTCGGATCTGCTTCTGCTGCTGCTCCCGTTACTGCGG
CTGCTCCGCTCTCCATGGCGTCTTCCGCCGCCGATAATGCCGCTCCTACGCCCGTCCAGAAGAAGGAAGAGGTCATGGAAGAGAGTGAGGATGACATGGTCTTCGGCTTG
TTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGACGACGACATCACCGTCACTGCCGACAAGATCTCCGCATTGGTGAAGGCTGCCGGCCTTAC
CGTCGAATCCTACTGGCCCTCTCTCTTCGCTAAGCTGGCCTCACAAAGGAACATCGACGATCTCGTTCTCAGCGTCGGATCTGCTTCTGCTGCTGCTCCCGTTACTGCGG
CTGCTCCGCTCTCCATGGCGTCTTCCGCCGCCGATAATGCCGCTCCTACGCCCGTCCAGAAGAAGGAAGAGGTCATGGAAGAGAGTGAGGATGACATGGTCTTCGGCTTG
TTTGATTAG
Protein sequenceShow/hide protein sequence
MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESEDDMVFGL
FD