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Lag0000154 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000154
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:620658..621771
RNA-Seq ExpressionLag0000154
SyntenyLag0000154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]6.8e-0656.52Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKD
        ++K+   KR KG+YCLFHRDH+H+T++C  LK+E+E LIR  YLK+
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKD

XP_022158621.1 uncharacterized protein LOC111025072 [Momordica charantia]2.3e-0645.71Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KG+YCLFHRDH H+T++C  L +E+E LIR  YL++    P+ T++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

XP_022158669.1 uncharacterized protein LOC111025131 [Momordica charantia]3.0e-0647.14Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KGQYCLFHRDH H+T++C  LK+E+E LI++ YLK+     + T++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.0e-0633.55Show/hide
Query:  EPENSTQKYMSVEEVLRS------KRSEHKSYSSVDRDQ--KKDKRLRTDEGDLNGNSKYESPSV------------------SRKLKSNHDKRDKGQYC
        E  +  Q+YMS  E   S      KR++ K   S D+ Q  + +KR R+ + D     +  +P+                     ++K++  KR KG+YC
Subjt:  EPENSTQKYMSVEEVLRS------KRSEHKSYSSVDRDQ--KKDKRLRTDEGDLNGNSKYESPSV------------------SRKLKSNHDKRDKGQYC

Query:  LFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        LFHRDH H+T++C  LK+E+E LIR  YLK+    P+ T++  G+ D  P  EIR
Subjt:  LFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

XP_022159110.1 uncharacterized protein LOC111025549 [Momordica charantia]2.3e-0645.71Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KG+YCLFH+DH H+T++C  LK+E+E LIR  YLK+    P+  ++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

TrEMBL top hitse value%identityAlignment
A0A6J1DWY0 uncharacterized protein LOC1110252931.5e-0633.55Show/hide
Query:  EPENSTQKYMSVEEVLRS------KRSEHKSYSSVDRDQ--KKDKRLRTDEGDLNGNSKYESPSV------------------SRKLKSNHDKRDKGQYC
        E  +  Q+YMS  E   S      KR++ K   S D+ Q  + +KR R+ + D     +  +P+                     ++K++  KR KG+YC
Subjt:  EPENSTQKYMSVEEVLRS------KRSEHKSYSSVDRDQ--KKDKRLRTDEGDLNGNSKYESPSV------------------SRKLKSNHDKRDKGQYC

Query:  LFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        LFHRDH H+T++C  LK+E+E LIR  YLK+    P+ T++  G+ D  P  EIR
Subjt:  LFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

A0A6J1DXQ6 uncharacterized protein LOC1110255491.1e-0645.71Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KG+YCLFH+DH H+T++C  LK+E+E LIR  YLK+    P+  ++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

A0A6J1E032 uncharacterized protein LOC1110251311.5e-0647.14Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KGQYCLFHRDH H+T++C  LK+E+E LI++ YLK+     + T++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

A0A6J1E1G3 uncharacterized protein LOC1110250721.1e-0645.71Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR
        ++K+   KR KG+YCLFHRDH H+T++C  L +E+E LIR  YL++    P+ T++  G+ D  P  EIR
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR

A0A7J0GL90 Uncharacterized protein5.6e-0650Show/hide
Query:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYL-KDSPPRPRPTRDDPGKDDDGP
        K+K+N  KR+K +YC FH+DH H+T +C QLK++I  LI+  YL K    RPRP   D G DD+ P
Subjt:  KLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYL-KDSPPRPRPTRDDPGKDDDGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGCCGAGGCCAAAAAGGACAACCTACCTTGGAAGACTGAGCTTCTGAACACACTAAAGGAGCTAAAAATCCTCAGGGGACCTGCAAAAATCAAAGGACTCTG
GAGAAGAAGACTTGGAAGATCAGCCAAGCAACGGTTTCAGAGGTTGAAAAGGAGATCCATCAGCTCTTTCAAAGAATTAGCCTGGCATTCCTCTCGCAGTTCATGGGAGC
CAGAGAACAGCACACAGAAATACATGAGCGTAGAGGAAGTGCTTAGATCGAAGAGGTCAGAGCACAAGAGTTATTCTTCAGTTGACCGAGACCAGAAGAAGGACAAAAGA
CTGCGAACAGACGAAGGAGATCTTAATGGAAATTCGAAATACGAATCTCCTAGTGTATCCAGAAAGCTGAAGTCAAATCATGACAAAAGAGACAAAGGGCAGTATTGTCT
CTTCCACCGAGACCACGAACATTCAACCAGAAACTGCAATCAATTGAAGGATGAAATTGAAGTCCTGATTAGGAACGAGTATCTGAAGGATTCACCACCAAGGCCGAGGC
CAACCAGAGATGACCCAGGCAAAGACGATGATGGACCCCCTCTAGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGCCGAGGCCAAAAAGGACAACCTACCTTGGAAGACTGAGCTTCTGAACACACTAAAGGAGCTAAAAATCCTCAGGGGACCTGCAAAAATCAAAGGACTCTG
GAGAAGAAGACTTGGAAGATCAGCCAAGCAACGGTTTCAGAGGTTGAAAAGGAGATCCATCAGCTCTTTCAAAGAATTAGCCTGGCATTCCTCTCGCAGTTCATGGGAGC
CAGAGAACAGCACACAGAAATACATGAGCGTAGAGGAAGTGCTTAGATCGAAGAGGTCAGAGCACAAGAGTTATTCTTCAGTTGACCGAGACCAGAAGAAGGACAAAAGA
CTGCGAACAGACGAAGGAGATCTTAATGGAAATTCGAAATACGAATCTCCTAGTGTATCCAGAAAGCTGAAGTCAAATCATGACAAAAGAGACAAAGGGCAGTATTGTCT
CTTCCACCGAGACCACGAACATTCAACCAGAAACTGCAATCAATTGAAGGATGAAATTGAAGTCCTGATTAGGAACGAGTATCTGAAGGATTCACCACCAAGGCCGAGGC
CAACCAGAGATGACCCAGGCAAAGACGATGATGGACCCCCTCTAGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MVEAEAKKDNLPWKTELLNTLKELKILRGPAKIKGLWRRRLGRSAKQRFQRLKRRSISSFKELAWHSSRSSWEPENSTQKYMSVEEVLRSKRSEHKSYSSVDRDQKKDKR
LRTDEGDLNGNSKYESPSVSRKLKSNHDKRDKGQYCLFHRDHEHSTRNCNQLKDEIEVLIRNEYLKDSPPRPRPTRDDPGKDDDGPPLEIR