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Lag0000164 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000164
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:733385..733812
RNA-Seq ExpressionLag0000164
SyntenyLag0000164
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.4e-1847.57Show/hide
Query:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT
        T S R WF++LKR+SI  FK+LARAF+ QF G     +P   LLT+KQ+  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S G     T
Subjt:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT

Query:  YAE
        ++E
Subjt:  YAE

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.5e-1849.5Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LA+AF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S G   P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.1e-2152.43Show/hide
Query:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT
        T SAR+WF +LKR SI  FK+LA AF+ QF+G R   KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++  AL+A  +G++DERL+ S G   P T
Subjt:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT

Query:  YAE
        + E
Subjt:  YAE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.8e-2052.48Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LARAF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S G   P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.0e-1849.5Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LARAF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S     P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.7e-1847.57Show/hide
Query:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT
        T S R WF++LKR+SI  FK+LARAF+ QF G     +P   LLT+KQ+  ESL+DY+ RFN E LQVEG ++   L+   +G++DE+L+ S G     T
Subjt:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT

Query:  YAE
        ++E
Subjt:  YAE

A0A6J1D7D2 uncharacterized protein LOC1110183077.5e-1949.5Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LA+AF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S G   P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-2052.48Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LARAF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S G   P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

A0A6J1DZ49 uncharacterized protein LOC1110248515.5e-2252.43Show/hide
Query:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT
        T SAR+WF +LKR SI  FK+LA AF+ QF+G R   KP   LLT+KQ+  ESL++Y+ RFN+E LQVEG ++  AL+A  +G++DERL+ S G   P T
Subjt:  TISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRT

Query:  YAE
        + E
Subjt:  YAE

A0A6J1E1E7 uncharacterized protein LOC1110255489.7e-1949.5Show/hide
Query:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA
        SAR WF +LKR SI  FK LARAF+ QF+G R   +P   LLT+KQ+  ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L  S     P T++
Subjt:  SARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYA

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTTTGGTCCCCGAGGACCATATCAGCCAGGCATTGGTTTGAGAGGCTGAAAAGGAGATCCATCGGCTGCTTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTT
CATGGGGGCCAGAGAATTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTAC
AGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAATAACCAACCTCGAACCTATGCGGAG
TTAGTCCTTCACGAGTGTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTTTGGTCCCCGAGGACCATATCAGCCAGGCATTGGTTTGAGAGGCTGAAAAGGAGATCCATCGGCTGCTTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTT
CATGGGGGCCAGAGAATTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTAC
AGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAATAACCAACCTCGAACCTATGCGGAG
TTAGTCCTTCACGAGTGTTCGTAA
Protein sequenceShow/hide protein sequence
MHFWSPRTISARHWFERLKRRSIGCFKDLARAFLAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGNNQPRTYAE
LVLHECS