; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000166 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000166
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr4:759373..760555
RNA-Seq ExpressionLag0000166
SyntenyLag0000166
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033299.1 uncharacterized protein E6C27_scaffold845G001100 [Cucumis melo var. makuwa]1.1e-1352.11Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVEE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   +VDDEG+F+++FM ++ASI AW YC PV+SV++
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVEE

KAA0048516.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]4.2e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y T + DDEG+F+++FM ++ SI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]5.5e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.5e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]5.5e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

TrEMBL top hitse value%identityAlignment
A0A1S4E392 uncharacterized protein LOC1079918242.6e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

A0A5A7SVT9 CCHC-type domain-containing protein5.3e-1452.11Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVEE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   +VDDEG+F+++FM ++ASI AW YC PV+SV++
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVEE

A0A5D3CDB8 Uncharacterized protein2.6e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

A0A5D3DWU8 Protein FAR1-RELATED SEQUENCE 4-like2.0e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y T + DDEG+F+++FM ++ SI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

A0A5D3E198 MuDRA-like transposase2.6e-1351.43Show/hide
Query:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE
        G  +   +IRG+PE SYA++  FS ALI  NPG Y   + DDEG+F+++FM ++ASI AW YC PV+SV+
Subjt:  GGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGGTATGGAGGGGGCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCCTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAA
CCCAGGTGCATACCCTACTTTTGATGTTGACGATGAGGGAAAGTTCAGGTACTTTTTCATGTGTGTCTCTGCGTCCATACATGCATGGAAATACTGTTTTCCTGTTATGT
CGGTTGAAGAGATCTTCTTCTTCTTCCTCGCGGATCCCAGCTGCTCTCTCTCTCTTGACGAACTCTCTCTCTCTCTCCCTGTGCCGCCTGCTCCTGCCGACGACTCCTCT
CCGACAGCAACAGTCGTCGCACACCTTCCGCCCAGCCCTGTGAAACGCAGTGAACAAAGGACTAGTGTCGCCACTGGTTTGTCCCGATCGTGGTTTATTCCCGAAGCGTT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGGTATGGAGGGGGCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCCTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAA
CCCAGGTGCATACCCTACTTTTGATGTTGACGATGAGGGAAAGTTCAGGTACTTTTTCATGTGTGTCTCTGCGTCCATACATGCATGGAAATACTGTTTTCCTGTTATGT
CGGTTGAAGAGATCTTCTTCTTCTTCCTCGCGGATCCCAGCTGCTCTCTCTCTCTTGACGAACTCTCTCTCTCTCTCCCTGTGCCGCCTGCTCCTGCCGACGACTCCTCT
CCGACAGCAACAGTCGTCGCACACCTTCCGCCCAGCCCTGTGAAACGCAGTGAACAAAGGACTAGTGTCGCCACTGGTTTGTCCCGATCGTGGTTTATTCCCGAAGCGTT
TTAG
Protein sequenceShow/hide protein sequence
MTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYPTFDVDDEGKFRYFFMCVSASIHAWKYCFPVMSVEEIFFFFLADPSCSLSLDELSLSLPVPPAPADDSS
PTATVVAHLPPSPVKRSEQRTSVATGLSRSWFIPEAF