; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000170 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000170
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr4:829513..829818
RNA-Seq ExpressionLag0000170
SyntenyLag0000170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]9.9e-1455.88Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF +GS+SGTK +P +S SK+ +KKKG +G KA   A +   KAK  A K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]9.9e-1454.9Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF +GS+SGTK +P +S +K+ +KKKG +G KA   A +   KAKV   K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

KAA0050177.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-1452.48Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG
        MNKI + LTTLLNEL+ ++S++K KG+   KGEANVA S +KFL+GS+S TK VP +S +K+ +KKKGD+G      +  K   KV A K   FHCN +G
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG

Query:  H
        H
Subjt:  H

KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-1455.88Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF KGS+SGTK +P +S +K+++KKKG +G KA   A +   KAK  A K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

XP_038874988.1 uncharacterized protein LOC120067510 [Benincasa hispida]1.6e-1659.41Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG
        M K QFNLT          S+LK+KGK  ++ EA+VAHSK+KF KG SSGTK V Q+S+SK+IQK KG+KGKAP  A + KGK K + DK K FHCNVDG
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A5A7SMN4 Gag/pol protein4.8e-1455.88Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF +GS+SGTK +P +S SK+ +KKKG +G KA   A +   KAK  A K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

A0A5A7U727 Gag/pol protein2.8e-1452.48Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG
        MNKI + LTTLLNEL+ ++S++K KG+   KGEANVA S +KFL+GS+S TK VP +S +K+ +KKKGD+G      +  K   KV A K   FHCN +G
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDG

Query:  H
        H
Subjt:  H

A0A5A7UUN7 Gag/pol protein1.3e-1455.88Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF KGS+SGTK +P +S +K+++KKKG +G KA   A +   KAK  A K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

A0A5A7V5A8 Gag/pol protein8.1e-1454.9Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF +GS SGTK +P +S +K+ +KKKG +G KA   A +   KAK  A K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

A0A5D3C269 Gag/pol protein4.8e-1454.9Show/hide
Query:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD
        MNKI + LTTLLNELQ +ES++K KG+   KGEANVA S +KF +GS+SGTK +P +S +K+ +KKKG +G KA   A +   KAKV   K   FHCN +
Subjt:  MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKG-KAPTKAVQYKGKAKVVADKDKFFHCNVD

Query:  GH
        GH
Subjt:  GH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGATTCAGTTTAACTTGACCACCCTTCTAAATGAGTTACAGGTTTATGAGTCCATGCTGAAAAGCAAAGGCAAAAATGTGGTGAAAGGAGAGGCCAATGTGGC
CCATTCCAAAAAGAAGTTCCTAAAGGGTTCATCCTCAGGAACAAAACCTGTACCTCAAGCTTCTTCATCGAAGCAAATTCAGAAGAAGAAGGGTGACAAGGGGAAGGCTC
CTACGAAGGCTGTACAGTATAAGGGAAAGGCCAAGGTCGTGGCCGATAAGGACAAGTTCTTCCACTGCAATGTGGATGGTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGATTCAGTTTAACTTGACCACCCTTCTAAATGAGTTACAGGTTTATGAGTCCATGCTGAAAAGCAAAGGCAAAAATGTGGTGAAAGGAGAGGCCAATGTGGC
CCATTCCAAAAAGAAGTTCCTAAAGGGTTCATCCTCAGGAACAAAACCTGTACCTCAAGCTTCTTCATCGAAGCAAATTCAGAAGAAGAAGGGTGACAAGGGGAAGGCTC
CTACGAAGGCTGTACAGTATAAGGGAAAGGCCAAGGTCGTGGCCGATAAGGACAAGTTCTTCCACTGCAATGTGGATGGTCACTAG
Protein sequenceShow/hide protein sequence
MNKIQFNLTTLLNELQVYESMLKSKGKNVVKGEANVAHSKKKFLKGSSSGTKPVPQASSSKQIQKKKGDKGKAPTKAVQYKGKAKVVADKDKFFHCNVDGH