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Lag0000181 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000181
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:1146759..1147328
RNA-Seq ExpressionLag0000181
SyntenyLag0000181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659004.1 putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucumis sativus]2.7e-2571.95Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW++GCN+FQIA+RQI+RTFAH+  R C+ P +NLTK LHNRL+EDIE KFSE RQVILTN+L +TTLLNC SD +ALSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

XP_022927167.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita moschata]2.9e-2776.83Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW HGCN+F+IA RQILRTFAH+ +R C  PL+NLTKNLHN+LN+DIE KFSE RQVILTNEL HTTLLNC SD V LSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

XP_023001025.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima]5.0e-2776.83Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW+HGCN+F+IA+RQILRTFAH+  R CS  L+NLTKNLHN+LNEDIE KFSE RQVILTNEL HTTLL C SD V LSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

XP_023519013.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo]5.0e-2775.61Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW+HGCN+F+IA  +ILRTFAH+ +R CS PL+NLTKNLHN+LNED+E KFSE RQVILTNEL HTTLLNC SD V LSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

XP_038894703.1 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16830 [Benincasa hispida]2.1e-2575.61Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW+HGCN+FQIA RQILRTFAH+ +R  S P +NLTKNLHNRL+EDIE KFSE RQVILTN+   TTLLNC SD VALSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

TrEMBL top hitse value%identityAlignment
A0A0A0M137 Uncharacterized protein1.3e-2571.95Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW++GCN+FQIA+RQI+RTFAH+  R C+ P +NLTK LHNRL+EDIE KFSE RQVILTN+L +TTLLNC SD +ALSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

A0A1S3BD22 putative pentatricopeptide repeat-containing protein At1g168301.4e-2267.07Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW++GCN+FQIA RQI R FA    R C+ PL+NLTK LHNRL+EDIE K  + RQVILTN+L +TTLLNC SD +ALSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

A0A6J1CES7 putative pentatricopeptide repeat-containing protein At1g16830 isoform X11.1e-2270.73Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        M W+HG +LFQIA RQ LRT AH+    CS PLVNLT+ LHNRLN++ E K+SEK QVILTNEL HTTLLNC SD VALSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

A0A6J1EGE1 putative pentatricopeptide repeat-containing protein At1g168301.4e-2776.83Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW HGCN+F+IA RQILRTFAH+ +R C  PL+NLTKNLHN+LN+DIE KFSE RQVILTNEL HTTLLNC SD V LSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

A0A6J1KFA9 putative pentatricopeptide repeat-containing protein At1g168302.4e-2776.83Show/hide
Query:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF
        MIW+HGCN+F+IA+RQILRTFAH+  R CS  L+NLTKNLHN+LNEDIE KFSE RQVILTNEL HTTLL C SD V LSFF
Subjt:  MIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGTTTCTTCCTTCTCTCCCTATCTCTCTCTCTCTGCTGTAATCACGCCGGGCGTCAGCACACACGACTGCGCGACTTTCTTCTACTCGTCGCCAACTGCACACCG
CATTCTTTTGCCGGTCGCCAAGGTGCACGCTCTGTTTTCTGCAACCCCTCCCTCTCTCAGTCGCTTGTTGCTAAGTTCGCAGGGATCAATTTTTTCCTTGTTCATTTTCT
TTCTTAGTTCAACCAATACGACCAATTTTTTATGGATGTTTTTTGGGGGTAAGCCTATTTTTTTGGGACACAAGAAAGTTGAGCTTCACTTGGAAATGATATGGAAACAT
GGCTGTAATCTCTTCCAAATAGCAGCTCGTCAAATCCTCAGAACATTTGCCCATCGGTTGAATCGAATATGTTCAGTCCCACTTGTAAATTTAACCAAAAACCTCCACAA
CCGACTAAACGAAGACATTGAGCACAAATTTTCTGAGAAGAGGCAAGTGATTCTCACTAATGAGCTTGCACACACCACTCTATTGAATTGTCATTCTGATTCGGTCGCCT
TGAGCTTTTTTCGACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGTTTCTTCCTTCTCTCCCTATCTCTCTCTCTCTGCTGTAATCACGCCGGGCGTCAGCACACACGACTGCGCGACTTTCTTCTACTCGTCGCCAACTGCACACCG
CATTCTTTTGCCGGTCGCCAAGGTGCACGCTCTGTTTTCTGCAACCCCTCCCTCTCTCAGTCGCTTGTTGCTAAGTTCGCAGGGATCAATTTTTTCCTTGTTCATTTTCT
TTCTTAGTTCAACCAATACGACCAATTTTTTATGGATGTTTTTTGGGGGTAAGCCTATTTTTTTGGGACACAAGAAAGTTGAGCTTCACTTGGAAATGATATGGAAACAT
GGCTGTAATCTCTTCCAAATAGCAGCTCGTCAAATCCTCAGAACATTTGCCCATCGGTTGAATCGAATATGTTCAGTCCCACTTGTAAATTTAACCAAAAACCTCCACAA
CCGACTAAACGAAGACATTGAGCACAAATTTTCTGAGAAGAGGCAAGTGATTCTCACTAATGAGCTTGCACACACCACTCTATTGAATTGTCATTCTGATTCGGTCGCCT
TGAGCTTTTTTCGACGGTGA
Protein sequenceShow/hide protein sequence
MPVSSFSPYLSLSAVITPGVSTHDCATFFYSSPTAHRILLPVAKVHALFSATPPSLSRLLLSSQGSIFSLFIFFLSSTNTTNFLWMFFGGKPIFLGHKKVELHLEMIWKH
GCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFFRR