; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000213 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000213
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:1593540..1596834
RNA-Seq ExpressionLag0000213
SyntenyLag0000213
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.2e-9247.58Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        MD +GVS+A+RCR F  TL GSAR WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------KSEREYKRFSSSNY---DRASTDGDPK---------------------YG
        + + DE L  S GK  P T++E +SRAQ+YMSA E   SK          K ER   +   S +   DR+S    P+                       
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------KSEREYKRFSSSNY---DRASTDGDPK---------------------YG

Query:  LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRKR
        LLK+P +MK+S+ +R K +YC FHRDHGH+T++   LK+E+E LI+ GYLKE+V EP+A           T+ G+  + P REIRTI GGP+   S RKR
Subjt:  LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRKR

Query:  KAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGER
        KA  REAR   E   +Y  + +     +EF+E EA  +  PHNDALV+ L +ANVK+HR+L+DGGSSA ++S TA+KAM L  ++LK S  PLVGFG ER
Subjt:  KAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGER

Query:  VTLEGSIKLPVTFG
        V  EG I+LPVTFG
Subjt:  VTLEGSIKLPVTFG

XP_023876176.1 uncharacterized protein LOC111988620 [Quercus suber]1.9e-7639.47Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M   G++D I CRAF  TL G AR WF RL   SIS FK+L+  F   F+G    +K    L+++KQ+  E+LR YITRFN EAL ++   +   + A T
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELL-----KSKKSEREYKRFSSSNYDRASTDGD------------------------------PKY
          L   + L S+ K+ P+T AE + RA KYM+AE+ L     K +K ER+ +R       R   D                                   
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELL-----KSKKSEREYKRFSSSNYDRASTDGD------------------------------PKY

Query:  GLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRK
        G L FPGK+KS   +R + +YC FHRDHGH T     LK +IEALI+ G L++FV + R +      +P   +  +    P+ +IR I GG    GSS+K
Subjt:  GLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRK

Query:  RKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGE
         +          +  G       +  P + F+E +A  +H PH+DALVVTL V    +HR+L+D GSSA +L   AF+ M + +E L P   PLVGFGG 
Subjt:  RKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGE

Query:  RVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
        RV   G+I L VT GD    +T+ + FLVV+C SAYNAILGRPTL+  KA  STYH
Subjt:  RVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.7e-8540.46Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M+  G S AI CRAF  TL G+AR WF RL+  SIS F DL++ F + F  AR+  KP   LLTVKQQ GE+LRDYI R+N+E  QV+GY +G AL  I 
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKKSE---------------------------------------REYKRFSSSNYDRASTDG
          L   +L  S+ K  P +Y+E ++RA+KY +AEE  K++  E                                       R+ +   +S +   +   
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKKSE---------------------------------------REYKRFSSSNYDRASTDG

Query:  DPKYGLL---------KFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYG---QDKEEPLRE
         P+  +L         + P  MK++  RR+ ++YC FH+DHGH T    +LK++IE+L++ G L+E+V  P        P  S  + G   +D +E + +
Subjt:  DPKYGLL---------KFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYG---QDKEEPLRE

Query:  IRTIFGGPVGGGSSRKRKAIAREARVEPEYRGMYSVHLSKAHP----PLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAM
        +  I+GGP  G S + RK +AR+AR EP    +   + S+       P+ F+E +A  +H PH DALVVTL VAN ++HRILID GSSA +L L+ F  M
Subjt:  IRTIFGGPVGGGSSRKRKAIAREARVEPEYRGMYSVHLSKAHP----PLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAM

Query:  RLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHY
         L R  LKP  TPL GF G  V  EG I+L V+FG     VT M+NF+VVD  S+YNA+LGRPTL+ +KA  S YHY
Subjt:  RLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHY

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]8.4e-7739.12Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M+  GVS AI CRAF  TL+ +AR WF  L+  SIS F +L + F   F  AR+  KP   LLTVKQ  GESLR+YI R+N E  QV+GY +G AL  + 
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKKSE--------------------------------REYKRFSS-----------SNYDRA
          L+  RL  S+ K+ P TY+E +SRA+KY +AEE  +SKK                                  R + + SS           +NY   
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKKSE--------------------------------REYKRFSS-----------SNYDRA

Query:  STDGD------PKYGLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKE----EPL
        +   +          L K P  +KS   RR++ +YC F++D GH T     LK++IE+L++   L+ +V    +  +   P  S    G+ KE    E +
Subjt:  STDGD------PKYGLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKE----EPL

Query:  REIRTIFGGPVGGGSSRKRKAIAREARVEPEYRGMYSVHLSK-------AHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLT
          +  I+GGP  G S + RK +AR+AR EP   G+  ++L+           P+ F+E +   IH PH DA+VVTL VAN ++HRILID GSSA +L L+
Subjt:  REIRTIFGGPVGGGSSRKRKAIAREARVEPEYRGMYSVHLSK-------AHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLT

Query:  AFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHYFTIKVQYSGVCTRQPTQA
        AF  M L R  L P  T L GF G  V  EG I+L V+FG     VT M+ F+VVD  SAYN++LGRPTL+ +KA  S YHY T+K          PT+A
Subjt:  AFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHYFTIKVQYSGVCTRQPTQA

Query:  S
        S
Subjt:  S

XP_030958631.1 uncharacterized protein LOC115980538 [Quercus lobata]5.4e-7638.23Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M   GV D I CRAF  TL G AR WF ++   S+S F++L++ F+  F+G +  ++   +LLT++Q   ESLR +ITRFN EAL V+   +   L A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK--------------SEREYKRFSSSNYDRASTDG-------------------------
          +  +  ++ + + +P+T AE V  AQ +M+AE+ + +KK              SE+  +       DR   DG                         
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKK--------------SEREYKRFSSSNYDRASTDG-------------------------

Query:  ---DPKYGLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPV
           DP    LK+P KMK   ++R+K++YC FHRDHGH T     LK +IE LI+ G LK FVG  R +           K  +    PL EIR I GG  
Subjt:  ---DPKYGLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPV

Query:  GGGSSRKRKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTP
         G SS+ +K   +  +   +  G          P + FT  +A  IH PH+DA+V+TL++A+    R+L+D GSSA VL   AF+ MRLGR+ L+   +P
Subjt:  GGGSSRKRKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTP

Query:  LVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
        L+GFGG +V   G+I LPV  G     +TK +NFLVVDC S+YNAI+GRPTL+  KAI STYH
Subjt:  LVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

TrEMBL top hitse value%identityAlignment
A0A2N9EHS9 Ribonuclease H3.3e-7942.24Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M  HGVSD I CR F   L GSAR WF +L+  SI  F  L++AFI  F+G R   +P   LL ++Q+ GESLR Y+ RFN EA+Q++  +E  AL A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPKY---GLLKFPGKMKSSADRRDKSQYCPFH
        A L     L  + K  P++ +E +  AQK+++AE       E L  K+ E E +R+ SS   ++S    PK      +++PGK++S   RR K  YC FH
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPKY---GLLKFPGKMKSSADRRDKSQYCPFH

Query:  RDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RVEPEYRGMY
        RDHGH+T +   LK +IEALI+ G L +FV + + E     PRP      +D++E      + EIRTI GG   GG+SR  RKA AR+A  +    R   
Subjt:  RDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RVEPEYRGMY

Query:  SVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQ
        S+ +      + F+E +A +IH PH+DALVVTL +A     R+LID GSSA ++ L A++ M++ +E LKP   PLVGF G++V   G + L +  G   
Subjt:  SVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQ

Query:  NAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
          V   + FLVVDC SAYN I+GRPTL++++A+ STYH
Subjt:  NAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

A0A2N9FQ85 Ribonuclease H6.7e-8042.34Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M  HGVSD I CR F   L GSAR WF +L+  SI  F  L++AFI  F+G R   +P   LL ++Q+ GESLR Y+ RFN EA+Q++  +E  AL A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPK-----YGL----LKFPGKMKSSADRRDKS
        A L     L  + K  P++ +E +  AQK+++AE       E L  K+ E E +RF SS  +++S    PK     + L    +K+PGK++S   +R K 
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPK-----YGL----LKFPGKMKSSADRRDKS

Query:  QYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RVEP
         YC FHRDHGH+T +   LK +IEALI+ G L +FV + + E  H  PRP      +D++E      + EIRTI GG   GG+SR  RKA AR+A  +  
Subjt:  QYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RVEP

Query:  EYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPV
          R   S+ +      + F+E +A +IH PH+DALVVTL +A     R+LID GSSA ++ L A++ M++ +E LKP   PLVGF G++V   G + L +
Subjt:  EYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPV

Query:  TFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
          G     V   + FLVVDC SAYN I+GRPTL++++A+ STYH
Subjt:  TFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

A0A2N9II83 Ribonuclease H6.7e-8041.7Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M  HGVSD I CR F   L GSAR WF +L+  SI  F  L++AFI  F+G R   +P   LL ++Q+ GESLR Y+ RFN EA+Q++  +E  AL A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPKYGL-----------LKFPGKMKSSADRRD
        A L     L  + K  P++ +E +  AQK+++AE       E L  K+ E E +RF SS  +++S    PK              +K+PGK++S   +R 
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAE-------ELLKSKKSEREYKRFSSSNYDRASTDGDPKYGL-----------LKFPGKMKSSADRRD

Query:  KSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RV
        K  YC FHRDHGH+T +   LK +IEALI+ G L +FV + + E  H  PRP      +D++E      + EIRTI GG   GG+SR  RKA AR+A  +
Subjt:  KSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEP-----LREIRTIFGGPVGGGSSR-KRKAIAREA-RV

Query:  EPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKL
            R   S+ +      + F+E +A +IH PH+DALVVTL +A     R+L+D GSSA ++ L A++ M++ +E LKP   PLVGF G++V   G + L
Subjt:  EPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKL

Query:  PVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
         +  G     V   + FLVVDC SAYN I+GRPTL++++A+ STYH
Subjt:  PVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-9247.83Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        MD +GVS+A+RCR F  TL GSAR WF +LKR SIS FK LA+AF+ QF+G R   +P   LLT+KQ+  ESLRDY+ RFN+E LQVEG ++  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------KSEREYKRFSSSNY---DRASTDGDPK---------------------YG
        + + DE L  S GK  P T++E +SRAQ+YMSA E   SK          K ER   +   S +   DR+S    P+                       
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSK----------KSEREYKRFSSSNY---DRASTDGDPK---------------------YG

Query:  LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRKR
        LLK+P +MK+S+ +R K +YC FHRDHGH+T++   LK+E+E LI+ GYLKE+V EP+A           T+ G+  + P REIRTI GGP+   S RKR
Subjt:  LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRKR

Query:  KAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGER
        KA  REAR   E   +Y  + +     +EF+E EA  +  PHNDALV+ L +ANVK+HR+L+DGGSSA +LS TA+KAM L  ++LK S  PLVGFG ER
Subjt:  KAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGER

Query:  VTLEGSIKLPVTFG
        V  EG I+LPVTFG
Subjt:  VTLEGSIKLPVTFG

A0A7N2N9G0 Reverse transcriptase4.8e-7840.39Show/hide
Query:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT
        M   GV+DAI CRAF  TL G+AR WF RL   SI  FK+L+  F A F+G    +K    L+++KQ+  E+LR YI+RFN EAL V+   +   + A T
Subjt:  MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAIT

Query:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELL---KSKKSEREYKRFSSSNYDRAST-DGD--------PKYG----------------------
          L+  + L S+ K+ P+T +E + RA KYM+AE+ L   + K  +RE +  +  +  R  T  GD        P  G                      
Subjt:  ARLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELL---KSKKSEREYKRFSSSNYDRAST-DGD--------PKYG----------------------

Query:  -LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAE--ADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSS
          L FPGK+KS  ++R + +YC FHRDHGH T +   LK +IEALI+ G L+ FV + RA+  A    PR    +  +    P+ +IR I GG    GSS
Subjt:  -LLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFVGEPRAE--ADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSS

Query:  RKRKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFG
        +K +          +  G+      +  P + F+E +A   H PH+DALVV+L V +  +HR+L+D GSSA +L  TAF+ MR+ RE L P+  PLVGFG
Subjt:  RKRKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDGGSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFG

Query:  GERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH
        G RV   G++ L V  GD    + + + FLVVDC SAYNAILGRPTL+  KA+ STYH
Subjt:  GERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCCACGGCGTTTCAGATGCAATCAGGTGTCGTGCCTTCTTTTTCACCCTAGCAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTG
TTTCAAGGATTTAGCCCAAGCATTCATTGCACAGTTCATGGGAGCCAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCTGGTGAGAGCTTAC
GTGATTACATAACGCGTTTTAACGATGAAGCACTGCAGGTTGAGGGATACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCAGACTGGAAGACGAAAGACTGCTCAAT
TCGATAGGTAAGAGCCAACCTCGAACCTATGCGGAGTTTGTCTCCCGGGCACAGAAGTATATGAGCGCAGAGGAGTTACTTAAGTCAAAGAAGTCGGAACGAGAGTACAA
GAGGTTTTCTTCATCTAACTACGACAGAGCAAGTACTGATGGAGATCCGAAATACGGCCTCCTGAAATTCCCAGGGAAGATGAAGTCGAGTGCCGATAGAAGAGACAAGA
GCCAGTATTGTCCTTTCCACCGGGACCACGGGCATTCAACCAGGAATTTTATTCAGTTGAAGGACGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTTCGTC
GGTGAGCCTAGGGCCGAGGCCGACCACGGATGGCCGAGGCCGAGCCTGACCAAATATGGCCAAGACAAAGAAGAACCTCTACGAGAGATCAGAACCATCTTTGGAGGACC
AGTTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCGAGGGTTGAACCAGAATATCGAGGTATGTACTCTGTCCATCTATCAAAGGCACACCCTCCTT
TGGAGTTCACTGAGGCTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCTCTGGTAGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGAATCCTAATTGATGGA
GGAAGCTCGGCTCATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGGGGAGAGAGAGT
GACCCTAGAAGGTAGCATAAAACTTCCTGTGACCTTTGGGGATGGTCAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAA
TCCTAGGAAGACCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATTATTTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGGCAACCGACTCAAGCA
TCAAGACATACGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGAGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGAGTGATACCATGTGGGCCTGGACC
AACGAGTCTACCTCACCTCCTCTGGCCAGAGCATCTTTACATCGGGCGAGCCTGGACTGCCGAGTCTACCTCGCCTCATCCAGAAAGTCGGGACCGAGCACCTCTTGCCA
AGGCCGAGCACCTCTTGCCGAGGCCAAACACAAACTTTAAAGAAAAATTAGAAAACTGCTCGGCCTCTTCCCGAGGCCGAGGTCGACCAGGCAAAAGGGAGGTAGCTGTG
CTCGGCCTCCTCCCGAGGCCGAGGCCGACCTACACCACTTTTGTAATCTCTCACCCTTTTTCATTTCCATTTCATCTAACCCCTATTCAGGGAGTGCCTACTTCTATCCT
ACTTTGCAGGATGACGACAAAACTACACGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCGGGTTGAAAGATGGACCAAGGAGGC
AAAACCGACAAGTGGGACGGGCCAAGAACGAAGGGGTCGGGTTTTTGCCCGACCCCCTGCTCGGCCTCGGCCATGAGCCGAGTCCGTTCGATGCCATTAGGCCCCTACCG
CCTCCGTCAGCCCCGGTTTTGCCTGGTTTGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCCACGGCGTTTCAGATGCAATCAGGTGTCGTGCCTTCTTTTTCACCCTAGCAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTG
TTTCAAGGATTTAGCCCAAGCATTCATTGCACAGTTCATGGGAGCCAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCTGGTGAGAGCTTAC
GTGATTACATAACGCGTTTTAACGATGAAGCACTGCAGGTTGAGGGATACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCAGACTGGAAGACGAAAGACTGCTCAAT
TCGATAGGTAAGAGCCAACCTCGAACCTATGCGGAGTTTGTCTCCCGGGCACAGAAGTATATGAGCGCAGAGGAGTTACTTAAGTCAAAGAAGTCGGAACGAGAGTACAA
GAGGTTTTCTTCATCTAACTACGACAGAGCAAGTACTGATGGAGATCCGAAATACGGCCTCCTGAAATTCCCAGGGAAGATGAAGTCGAGTGCCGATAGAAGAGACAAGA
GCCAGTATTGTCCTTTCCACCGGGACCACGGGCATTCAACCAGGAATTTTATTCAGTTGAAGGACGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTTCGTC
GGTGAGCCTAGGGCCGAGGCCGACCACGGATGGCCGAGGCCGAGCCTGACCAAATATGGCCAAGACAAAGAAGAACCTCTACGAGAGATCAGAACCATCTTTGGAGGACC
AGTTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCGAGGGTTGAACCAGAATATCGAGGTATGTACTCTGTCCATCTATCAAAGGCACACCCTCCTT
TGGAGTTCACTGAGGCTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCTCTGGTAGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGAATCCTAATTGATGGA
GGAAGCTCGGCTCATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGGGGAGAGAGAGT
GACCCTAGAAGGTAGCATAAAACTTCCTGTGACCTTTGGGGATGGTCAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAA
TCCTAGGAAGACCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATTATTTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGGCAACCGACTCAAGCA
TCAAGACATACGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGAGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGAGTGATACCATGTGGGCCTGGACC
AACGAGTCTACCTCACCTCCTCTGGCCAGAGCATCTTTACATCGGGCGAGCCTGGACTGCCGAGTCTACCTCGCCTCATCCAGAAAGTCGGGACCGAGCACCTCTTGCCA
AGGCCGAGCACCTCTTGCCGAGGCCAAACACAAACTTTAAAGAAAAATTAGAAAACTGCTCGGCCTCTTCCCGAGGCCGAGGTCGACCAGGCAAAAGGGAGGTAGCTGTG
CTCGGCCTCCTCCCGAGGCCGAGGCCGACCTACACCACTTTTGTAATCTCTCACCCTTTTTCATTTCCATTTCATCTAACCCCTATTCAGGGAGTGCCTACTTCTATCCT
ACTTTGCAGGATGACGACAAAACTACACGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCGGGTTGAAAGATGGACCAAGGAGGC
AAAACCGACAAGTGGGACGGGCCAAGAACGAAGGGGTCGGGTTTTTGCCCGACCCCCTGCTCGGCCTCGGCCATGAGCCGAGTCCGTTCGATGCCATTAGGCCCCTACCG
CCTCCGTCAGCCCCGGTTTTGCCTGGTTTGACCTAA
Protein sequenceShow/hide protein sequence
MDFHGVSDAIRCRAFFFTLAGSARHWFERLKRRSISCFKDLAQAFIAQFMGARELRKPHINLLTVKQQPGESLRDYITRFNDEALQVEGYSEGAALVAITARLEDERLLN
SIGKSQPRTYAEFVSRAQKYMSAEELLKSKKSEREYKRFSSSNYDRASTDGDPKYGLLKFPGKMKSSADRRDKSQYCPFHRDHGHSTRNFIQLKDEIEALIQNGYLKEFV
GEPRAEADHGWPRPSLTKYGQDKEEPLREIRTIFGGPVGGGSSRKRKAIAREARVEPEYRGMYSVHLSKAHPPLEFTEAEAASIHQPHNDALVVTLIVANVKIHRILIDG
GSSAHVLSLTAFKAMRLGRELLKPSLTPLVGFGGERVTLEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHYFTIKVQYSGVCTRQPTQA
SRHTSLDYRVYLASSRASLDYRVYLASSRVIPCGPGPTSLPHLLWPEHLYIGRAWTAESTSPHPESRDRAPLAKAEHLLPRPNTNFKEKLENCSASSRGRGRPGKREVAV
LGLLPRPRPTYTTFVISHPFSFPFHLTPIQGVPTSILLCRMTTKLHAILDHPDIQGADEDNRGEIGLKDGPRRQNRQVGRAKNEGVGFLPDPLLGLGHEPSPFDAIRPLP
PPSAPVLPGLT