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Lag0000222 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000222
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:1715782..1717954
RNA-Seq ExpressionLag0000222
SyntenyLag0000222
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147763.1 uncharacterized protein LOC111016620 [Momordica charantia]4.3e-1573.33Show/hide
Query:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT
        M AN+STN   +  +TI K+HAEKPEKFKGENFKRWQQKM+FY TTLNLAHI+KE CP T
Subjt:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT

XP_022148559.1 uncharacterized protein LOC111017193 [Momordica charantia]9.6e-1573.77Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+S N      +TI+K+HAEK EKFKGENFKRWQQKMIFY TTLNLAHILKE CP TP
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

XP_022150041.1 uncharacterized protein LOC111018314 [Momordica charantia]2.0e-1270.49Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+S N       TI+K+H EKPEKFKGENFKRWQQKMIFYLTTLNLAH LK   P TP
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

XP_022155402.1 uncharacterized protein LOC111022547 [Momordica charantia]2.1e-1473.33Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT
        MV N+STN +    +TI+K+HAEK +KFKGENFKRWQQKMIFYLTTLNLA+ILKE CP T
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT

XP_022156727.1 uncharacterized protein LOC111023572 [Momordica charantia]5.8e-1265.57Show/hide
Query:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+STN   +  +TI+K H EK EKF+G+NFK WQ KMIFYLTTLNLAHIL++ CP TP
Subjt:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

TrEMBL top hitse value%identityAlignment
A0A6J1D271 uncharacterized protein LOC1110166202.1e-1573.33Show/hide
Query:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT
        M AN+STN   +  +TI K+HAEKPEKFKGENFKRWQQKM+FY TTLNLAHI+KE CP T
Subjt:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT

A0A6J1D4C8 uncharacterized protein LOC1110171934.6e-1573.77Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+S N      +TI+K+HAEK EKFKGENFKRWQQKMIFY TTLNLAHILKE CP TP
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

A0A6J1DA93 uncharacterized protein LOC1110183149.7e-1370.49Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+S N       TI+K+H EKPEKFKGENFKRWQQKMIFYLTTLNLAH LK   P TP
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

A0A6J1DP87 uncharacterized protein LOC1110225471.0e-1473.33Show/hide
Query:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT
        MV N+STN +    +TI+K+HAEK +KFKGENFKRWQQKMIFYLTTLNLA+ILKE CP T
Subjt:  MVANSSTNVAE---ATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVT

A0A6J1DSQ3 uncharacterized protein LOC1110235722.8e-1265.57Show/hide
Query:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP
        M AN+STN   +  +TI+K H EK EKF+G+NFK WQ KMIFYLTTLNLAHIL++ CP TP
Subjt:  MVANSSTN---VAEATILKNHAEKPEKFKGENFKRWQQKMIFYLTTLNLAHILKEDCPVTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTTTAGACAAACCACCGCGGTCAAGGAGCATATCCGCTAGTAACAACTATGAAGAAATGGGGAAAATTGGAATCATCCCCTGCTCAGAAACATGTTGGGGAGA
CTCCACAAATGTAGAAGCCTGGTGGGACCTTTTGGCAAACTCAACACAGTGTATGTTAAGGTGTAATCAGTTTGCTAGTGTAACTCAGTTCTTATTTGAGCATATCTCCA
ACAATCTGAAGACAATTATTCTTGAACTGATGGTTGCAAACTCCTCCACTAATGTTGCTGAAGCGACCATCCTAAAAAATCATGCTGAAAAACCAGAGAAATTCAAGGGA
GAAAATTTCAAGAGGTGGCAACAGAAGATGATCTTCTACCTCACCACACTGAACCTTGCTCACATCTTGAAGGAAGATTGTCCAGTTACCCCACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTTTAGACAAACCACCGCGGTCAAGGAGCATATCCGCTAGTAACAACTATGAAGAAATGGGGAAAATTGGAATCATCCCCTGCTCAGAAACATGTTGGGGAGA
CTCCACAAATGTAGAAGCCTGGTGGGACCTTTTGGCAAACTCAACACAGTGTATGTTAAGGTGTAATCAGTTTGCTAGTGTAACTCAGTTCTTATTTGAGCATATCTCCA
ACAATCTGAAGACAATTATTCTTGAACTGATGGTTGCAAACTCCTCCACTAATGTTGCTGAAGCGACCATCCTAAAAAATCATGCTGAAAAACCAGAGAAATTCAAGGGA
GAAAATTTCAAGAGGTGGCAACAGAAGATGATCTTCTACCTCACCACACTGAACCTTGCTCACATCTTGAAGGAAGATTGTCCAGTTACCCCACCATAA
Protein sequenceShow/hide protein sequence
MKFLDKPPRSRSISASNNYEEMGKIGIIPCSETCWGDSTNVEAWWDLLANSTQCMLRCNQFASVTQFLFEHISNNLKTIILELMVANSSTNVAEATILKNHAEKPEKFKG
ENFKRWQQKMIFYLTTLNLAHILKEDCPVTPP