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Lag0000223 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000223
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:1727106..1727667
RNA-Seq ExpressionLag0000223
SyntenyLag0000223
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW52006.1 hypothetical protein CK203_068088 [Vitis vinifera]7.7e-2150.48Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGHRYGW+T N+ ECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

RVW76224.1 hypothetical protein CK203_048974 [Vitis vinifera]1.7e-2054.26Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVT
        DGGHRYGW+T N+ ECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVT

RVW92351.1 hypothetical protein CK203_032440 [Vitis vinifera]7.2e-1947.62Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGH+YGW+  N+VECIN +LKG + L ITAL+++TFYR V YF TRR EIQT M +   +  Y I  +  +ESRA+ HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

RVX19406.1 hypothetical protein CK203_008540 [Vitis vinifera]2.7e-2151.43Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGHRYGW+T N+VECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

XP_038876933.1 uncharacterized protein LOC120069292 [Benincasa hispida]1.0e-1752.33Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDH
        DGGH YGWLT NV E  N +LKG +KL ITALVQVTFY+T+ YF T   EI+ ++ S++ F +YA++ +  WE  A  H+ ++FDH
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDH

TrEMBL top hitse value%identityAlignment
A0A438EWG2 SWIM-type domain-containing protein3.7e-2150.48Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGHRYGW+T N+ ECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

A0A438GVJ1 MULE domain-containing protein8.3e-2154.26Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVT
        DGGHRYGW+T N+ ECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVT

A0A438I6L2 SWIM-type domain-containing protein3.5e-1947.62Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGH+YGW+  N+VECIN +LKG + L ITAL+++TFYR V YF TRR EIQT M +   +  Y I  +  +ESRA+ HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

A0A438K0P0 Serine/threonine-protein phosphatase 7 long form-like6.2e-1639.53Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        D G+RYGW+T N+VECIN +LKG + L ITALVQ+TFYR V YF TRR EI+  M     +  YAIE     E++A+ HT  +F       +V  ++   
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGGTKHHEHDRNRAFALSGRHMRFHVP
         M  G        N       +   F +P
Subjt:  TMKGGTKHHEHDRNRAFALSGRHMRFHVP

A0A438KDW5 SWIM-type domain-containing protein1.3e-2151.43Show/hide
Query:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI
        DGGHRYGW+T N+VECIN +LKG + L ITALV++TFYR V YF TRR EIQT M +   +  YAI  +  ++SRAN HT ++F     I +VT +    
Subjt:  DGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMRICDVTISIDSI

Query:  TMKGG
         M  G
Subjt:  TMKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTGGTCAGCGTCGGTCTGAGTCCAAAACCGACGCCGATCGACCAATGCTCACCCCTGGATGGTGGACATCGTTATGGTTGGTTGACAAAGAATGTAGTCGAGTG
CATCAATGAAATCTTGAAAGGAGAAAAAAAGTTGTCAATCACCGCATTAGTTCAGGTCACATTCTATCGAACTGTGAAATATTTTGCCACCAGACGACATGAAATACAAA
CTTCTATGAATTCCAAACAACGTTTCAAACAGTATGCAATTGAGATGCTAATTCCATGGGAATCACGAGCGAATGATCACACAGATGATGTGTTTGATCACGACATGCGT
ATATGCGATGTCACTATATCAATTGACTCAATAACGATGAAGGGTGGAACGAAACATCACGAACATGATAGAAATCGTGCATTTGCACTAAGTGGCAGACATATGAGATT
TCATGTTCCCATGCCATTGTTGCTTGTAAACATCTTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTGGTCAGCGTCGGTCTGAGTCCAAAACCGACGCCGATCGACCAATGCTCACCCCTGGATGGTGGACATCGTTATGGTTGGTTGACAAAGAATGTAGTCGAGTG
CATCAATGAAATCTTGAAAGGAGAAAAAAAGTTGTCAATCACCGCATTAGTTCAGGTCACATTCTATCGAACTGTGAAATATTTTGCCACCAGACGACATGAAATACAAA
CTTCTATGAATTCCAAACAACGTTTCAAACAGTATGCAATTGAGATGCTAATTCCATGGGAATCACGAGCGAATGATCACACAGATGATGTGTTTGATCACGACATGCGT
ATATGCGATGTCACTATATCAATTGACTCAATAACGATGAAGGGTGGAACGAAACATCACGAACATGATAGAAATCGTGCATTTGCACTAAGTGGCAGACATATGAGATT
TCATGTTCCCATGCCATTGTTGCTTGTAAACATCTTGGAGTAG
Protein sequenceShow/hide protein sequence
MSVVSVGLSPKPTPIDQCSPLDGGHRYGWLTKNVVECINEILKGEKKLSITALVQVTFYRTVKYFATRRHEIQTSMNSKQRFKQYAIEMLIPWESRANDHTDDVFDHDMR
ICDVTISIDSITMKGGTKHHEHDRNRAFALSGRHMRFHVPMPLLLVNILE