; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000225 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000225
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr4:1761650..1762918
RNA-Seq ExpressionLag0000225
SyntenyLag0000225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]9.8e-1829.43Show/hide
Query:  KFVNVAAKKKFEE-MFQRDSLPERRFVA-DMEKL--PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD---NELF--------------------
        KFV+ AA+K++EE ++ R+ + E+ F+  D   L  P F+S VII+ GW+I C+ P   +VPLV+EFYAN+Q+   N +F                    
Subjt:  KFVNVAAKKKFEE-MFQRDSLPERRFVA-DMEKL--PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD---NELF--------------------

Query:  ---------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLA
                                                     + +P A VW+ F  SRL  +TH  T+S+ R +L++++L    I+VGRL+  ++ A
Subjt:  ---------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLA

Query:  CAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGESKGRTSTNIVSGVEE
        CA++    L FP+LI+ LC ++ V  +  E  L + G +D  +I R+   S GR+  +     EE
Subjt:  CAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGESKGRTSTNIVSGVEE

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]6.4e-1731.96Show/hide
Query:  PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF---------------------------------------
        P F++ VI  HGW   CQ P + +VPLVREFYAN+ D                    N +F                                       
Subjt:  PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF---------------------------------------

Query:  ---------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLAC-AKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMD
                 + K  A +W+ F  +R  P+TH  TV+K+RVLL++SIL  +S+++  +  KE+ AC A RK   L FP+LIT L  KA V   +DE I+ +
Subjt:  ---------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLAC-AKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMD

Query:  KGIIDSASIARLHGESKGR
         G I + SI+R+   S+GR
Subjt:  KGIIDSASIARLHGESKGR

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.3e-1933.07Show/hide
Query:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF--
        KF   AA+ ++E   Q   L  E+ FV D    M +LP F++ VI  H W+  C  PE  +VPLVREFYAN+ D                    N +F  
Subjt:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF--

Query:  ----------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML
                                                         P A VW  F +S L P TH  TVSK+R+LL+ S+L   SI+VGR++  E+ 
Subjt:  ----------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML

Query:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE
        ACA RK   L FP+LIT LC  A+     +EE L + G ID+ ++AR+  E
Subjt:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.0e-1928.88Show/hide
Query:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQDNE------------------------
        KF   AA  ++E   Q   L  E+ FV D    M +LP F++ VI  H W+  C  PE  +VPLVREFYAN+ D E                        
Subjt:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQDNE------------------------

Query:  ---------------------LFQT-----------------------KPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML
                             + +T                        P A VW+ F +SRL P TH  TVSK+R+LL+ S+L   SI+VGR++  E+ 
Subjt:  ---------------------LFQT-----------------------KPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML

Query:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE-----------------SKGRTSTNI---VSGVEEILGQQR----RMM-
        ACA RK   L FP+LIT LC  A+     +EE L + G ID+ ++AR+  E                 S  RT+ +I   +  +E+ L QQ      MM 
Subjt:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE-----------------SKGRTSTNI---VSGVEEILGQQR----RMM-

Query:  ------------------RDSAMEKTFEFGFEELPQPFPQFPSGLFDPRCPSPSPSGNDDDADEGQE
                          RD+A++K  +  F      FP FP  +            + D ++E  E
Subjt:  ------------------RDSAMEKTFEFGFEELPQPFPQFPSGLFDPRCPSPSPSGNDDDADEGQE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.0e-1932.93Show/hide
Query:  LAVNERPKEKFVNVAAKKKFEEMFQRDSLP-ERRFVADMEK---LPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD------------------
        +A N     KF + AA+ ++EE  Q   L  E+ FV D  K    P F++ VII H W++ C  PE  +VPLVREFY N+ +                  
Subjt:  LAVNERPKEKFVNVAAKKKFEEMFQRDSLP-ERRFVADMEK---LPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD------------------

Query:  --NELFQ---------------TKPE---------------------------------ANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVG
          N +F                TKPE                                 A VW+ F +SRL P TH  TVSKE V L++S+L   SI+VG
Subjt:  --NELFQ---------------TKPE---------------------------------ANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVG

Query:  RLLAKEMLACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKG
        R++ +E+ ACA RK   L FP+LIT++C   +     +EE L + G
Subjt:  RLLAKEMLACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-1933.07Show/hide
Query:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF--
        KF   AA+ ++E   Q   L  E+ FV D    M +LP F++ VI  H W+  C  PE  +VPLVREFYAN+ D                    N +F  
Subjt:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF--

Query:  ----------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML
                                                         P A VW  F +S L P TH  TVSK+R+LL+ S+L   SI+VGR++  E+ 
Subjt:  ----------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML

Query:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE
        ACA RK   L FP+LIT LC  A+     +EE L + G ID+ ++AR+  E
Subjt:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.9e-1928.88Show/hide
Query:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQDNE------------------------
        KF   AA  ++E   Q   L  E+ FV D    M +LP F++ VI  H W+  C  PE  +VPLVREFYAN+ D E                        
Subjt:  KFVNVAAKKKFEEMFQRDSL-PERRFVAD----MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQDNE------------------------

Query:  ---------------------LFQT-----------------------KPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML
                             + +T                        P A VW+ F +SRL P TH  TVSK+R+LL+ S+L   SI+VGR++  E+ 
Subjt:  ---------------------LFQT-----------------------KPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEML

Query:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE-----------------SKGRTSTNI---VSGVEEILGQQR----RMM-
        ACA RK   L FP+LIT LC  A+     +EE L + G ID+ ++AR+  E                 S  RT+ +I   +  +E+ L QQ      MM 
Subjt:  ACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGE-----------------SKGRTSTNI---VSGVEEILGQQR----RMM-

Query:  ------------------RDSAMEKTFEFGFEELPQPFPQFPSGLFDPRCPSPSPSGNDDDADEGQE
                          RD+A++K  +  F      FP FP  +            + D ++E  E
Subjt:  ------------------RDSAMEKTFEFGFEELPQPFPQFPSGLFDPRCPSPSPSGNDDDADEGQE

A0A2P5DAQ2 Uncharacterized protein1.9e-1932.93Show/hide
Query:  LAVNERPKEKFVNVAAKKKFEEMFQRDSLP-ERRFVADMEK---LPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD------------------
        +A N     KF + AA+ ++EE  Q   L  E+ FV D  K    P F++ VII H W++ C  PE  +VPLVREFY N+ +                  
Subjt:  LAVNERPKEKFVNVAAKKKFEEMFQRDSLP-ERRFVADMEK---LPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD------------------

Query:  --NELFQ---------------TKPE---------------------------------ANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVG
          N +F                TKPE                                 A VW+ F +SRL P TH  TVSKE V L++S+L   SI+VG
Subjt:  --NELFQ---------------TKPE---------------------------------ANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVG

Query:  RLLAKEMLACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKG
        R++ +E+ ACA RK   L FP+LIT++C   +     +EE L + G
Subjt:  RLLAKEMLACAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKG

W9QTD9 Uncharacterized protein3.1e-1731.96Show/hide
Query:  PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF---------------------------------------
        P F++ VI  HGW   CQ P + +VPLVREFYAN+ D                    N +F                                       
Subjt:  PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD--------------------NELF---------------------------------------

Query:  ---------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLAC-AKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMD
                 + K  A +W+ F  +R  P+TH  TV+K+RVLL++SIL  +S+++  +  KE+ AC A RK   L FP+LIT L  KA V   +DE I+ +
Subjt:  ---------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLAC-AKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMD

Query:  KGIIDSASIARLHGESKGR
         G I + SI+R+   S+GR
Subjt:  KGIIDSASIARLHGESKGR

W9RBS1 Uncharacterized protein4.7e-1829.43Show/hide
Query:  KFVNVAAKKKFEE-MFQRDSLPERRFVA-DMEKL--PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD---NELF--------------------
        KFV+ AA+K++EE ++ R+ + E+ F+  D   L  P F+S VII+ GW+I C+ P   +VPLV+EFYAN+Q+   N +F                    
Subjt:  KFVNVAAKKKFEE-MFQRDSLPERRFVA-DMEKL--PLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQD---NELF--------------------

Query:  ---------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLA
                                                     + +P A VW+ F  SRL  +TH  T+S+ R +L++++L    I+VGRL+  ++ A
Subjt:  ---------------------------------------------QTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLA

Query:  CAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGESKGRTSTNIVSGVEE
        CA++    L FP+LI+ LC ++ V  +  E  L + G +D  +I R+   S GR+  +     EE
Subjt:  CAKRKVKRLLFPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGESKGRTSTNIVSGVEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATAAAGAAGTGGTTGTTCTAGGTGAAGAGGTTCAATCAAAGGCCACTAGAAGGAGTCCTAGAAAGAAAGGGAAAGGAAAGCAAGTTGTTGAACAAGAAGAGCT
TCAAGAAGAAGTGATTGTGGCTGAAGTCCAAGAGGAGGAAGTTGCACCTCCCCCTAAAAGTCCTCCAGCAAAGAAAAAGAGCCAAAAGAATAAAGGAAAGGAGCCAATGT
TGGCGGTTAATGAGAGGCCCAAGGAAAAATTTGTCAATGTTGCTGCCAAGAAAAAGTTTGAAGAAATGTTCCAAAGAGATTCTCTTCCCGAGAGAAGATTTGTGGCAGAC
ATGGAGAAGCTCCCCTTGTTTGTTTCAGCAGTGATCATCAACCATGGTTGGGAAATAATTTGTCAAAAGCCAGAGTCGGTCGTTGTTCCCTTGGTAAGGGAATTTTATGC
TAATGTTCAAGATAATGAACTCTTCCAAACCAAGCCCGAGGCAAATGTATGGCATACTTTTGCCAGGAGTAGGTTGTTTCCTGCCACTCATGACACCACGGTGTCCAAAG
AAAGAGTTCTTTTAGTTTTTTCCATCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATGTTGGCTTGTGCAAAAAGGAAGGTAAAAAGGCTACTT
TTCCCAAATCTTATTACAACATTGTGTTTCAAGGCTCAAGTTCAAATGGATGAGGATGAAGAGATCTTAATGGACAAGGGTATAATTGATTCAGCATCTATAGCGAGGTT
GCATGGGGAGAGTAAAGGGAGGACTAGCACAAATATTGTTTCTGGAGTTGAGGAAATCTTAGGGCAGCAAAGGAGAATGATGAGAGACTCTGCCATGGAAAAGACATTTG
AATTTGGTTTTGAGGAACTTCCTCAACCATTCCCTCAATTCCCCTCAGGTTTATTTGACCCACGGTGCCCTTCCCCATCTCCAAGTGGGAACGATGATGATGCTGATGAA
GGCCAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATAAAGAAGTGGTTGTTCTAGGTGAAGAGGTTCAATCAAAGGCCACTAGAAGGAGTCCTAGAAAGAAAGGGAAAGGAAAGCAAGTTGTTGAACAAGAAGAGCT
TCAAGAAGAAGTGATTGTGGCTGAAGTCCAAGAGGAGGAAGTTGCACCTCCCCCTAAAAGTCCTCCAGCAAAGAAAAAGAGCCAAAAGAATAAAGGAAAGGAGCCAATGT
TGGCGGTTAATGAGAGGCCCAAGGAAAAATTTGTCAATGTTGCTGCCAAGAAAAAGTTTGAAGAAATGTTCCAAAGAGATTCTCTTCCCGAGAGAAGATTTGTGGCAGAC
ATGGAGAAGCTCCCCTTGTTTGTTTCAGCAGTGATCATCAACCATGGTTGGGAAATAATTTGTCAAAAGCCAGAGTCGGTCGTTGTTCCCTTGGTAAGGGAATTTTATGC
TAATGTTCAAGATAATGAACTCTTCCAAACCAAGCCCGAGGCAAATGTATGGCATACTTTTGCCAGGAGTAGGTTGTTTCCTGCCACTCATGACACCACGGTGTCCAAAG
AAAGAGTTCTTTTAGTTTTTTCCATCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATGTTGGCTTGTGCAAAAAGGAAGGTAAAAAGGCTACTT
TTCCCAAATCTTATTACAACATTGTGTTTCAAGGCTCAAGTTCAAATGGATGAGGATGAAGAGATCTTAATGGACAAGGGTATAATTGATTCAGCATCTATAGCGAGGTT
GCATGGGGAGAGTAAAGGGAGGACTAGCACAAATATTGTTTCTGGAGTTGAGGAAATCTTAGGGCAGCAAAGGAGAATGATGAGAGACTCTGCCATGGAAAAGACATTTG
AATTTGGTTTTGAGGAACTTCCTCAACCATTCCCTCAATTCCCCTCAGGTTTATTTGACCCACGGTGCCCTTCCCCATCTCCAAGTGGGAACGATGATGATGCTGATGAA
GGCCAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MQDKEVVVLGEEVQSKATRRSPRKKGKGKQVVEQEELQEEVIVAEVQEEEVAPPPKSPPAKKKSQKNKGKEPMLAVNERPKEKFVNVAAKKKFEEMFQRDSLPERRFVAD
MEKLPLFVSAVIINHGWEIICQKPESVVVPLVREFYANVQDNELFQTKPEANVWHTFARSRLFPATHDTTVSKERVLLVFSILKILSIDVGRLLAKEMLACAKRKVKRLL
FPNLITTLCFKAQVQMDEDEEILMDKGIIDSASIARLHGESKGRTSTNIVSGVEEILGQQRRMMRDSAMEKTFEFGFEELPQPFPQFPSGLFDPRCPSPSPSGNDDDADE
GQED