; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000235 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000235
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionimportin subunit beta-1
Genome locationchr4:1888330..1888854
RNA-Seq ExpressionLag0000235
SyntenyLag0000235
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0008139 - nuclear localization sequence binding (molecular function)
GO:0031267 - small GTPase binding (molecular function)
GO:0061608 - nuclear import signal receptor activity (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR027140 - Importin subunit beta-1, plants
IPR040122 - Importin beta family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145935.3 importin subunit beta-1 [Cucumis sativus]6.7e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIY+RKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

XP_008437616.1 PREDICTED: importin subunit beta-1 [Cucumis melo]6.7e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIY+RKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

XP_022958163.1 importin subunit beta-1-like [Cucurbita moschata]6.7e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAG+
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

XP_023533267.1 importin subunit beta-1-like [Cucurbita pepo subsp. pepo]6.7e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAG+
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

XP_038906523.1 importin subunit beta-1-like [Benincasa hispida]6.7e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIY+RKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

TrEMBL top hitse value%identityAlignment
A0A0A0KJT4 Importin N-terminal domain-containing protein3.2e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIY+RKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

A0A1S3AV16 importin subunit beta-13.2e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIY+RKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

A0A6J1CBJ5 importin subunit beta-1-like4.2e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELS HTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

A0A6J1H2D7 importin subunit beta-1-like3.2e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAG+
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

A0A6J1K098 importin subunit beta-1-like4.2e-6998.57Show/hide
Query:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
        MYAMPMLQRAAELS HTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLL+PYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS
Subjt:  MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGS

Query:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
Subjt:  LIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

SwissProt top hitse value%identityAlignment
O18388 Importin subunit beta3.6e-0931.16Show/hide
Query:  MPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKT-----QLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNA
        + ML+ A+ L       D  M EY N LR  ILEAY+GI QG K   +T       + P+  HI+ F+  I    D+ + ++ +A G +GDL  + G   
Subjt:  MPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKT-----QLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNA

Query:  GSLIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISR
          L+  ++ ++ FL+E   S     K    WA   I +
Subjt:  GSLIQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISR

P52296 Importin subunit beta-11.6e-0933.33Show/hide
Query:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL
        LQ+A++  A     D +M +Y N LR   LEAY+GI QG K       P   L+ P    IL F+D I   +D  + V+  A G++GDL    G +   L
Subjt:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL

Query:  IQQSVSSKDFLSECLSSDDHLIKESAEWA
        ++      + L+E   S  +  K  A WA
Subjt:  IQQSVSSKDFLSECLSSDDHLIKESAEWA

P70168 Importin subunit beta-11.6e-0933.33Show/hide
Query:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL
        LQ+A++  A     D +M +Y N LR   LEAY+GI QG K       P   L+ P    IL F+D I   +D  + V+  A G++GDL    G +   L
Subjt:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL

Query:  IQQSVSSKDFLSECLSSDDHLIKESAEWA
        ++      + L+E   S  +  K  A WA
Subjt:  IQQSVSSKDFLSECLSSDDHLIKESAEWA

Q14974 Importin subunit beta-11.6e-0933.33Show/hide
Query:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL
        LQ+A++  A     D +M +Y N LR   LEAY+GI QG K       P   L+ P    IL F+D I   +D  + V+  A G++GDL    G +   L
Subjt:  LQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSS-----PKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL

Query:  IQQSVSSKDFLSECLSSDDHLIKESAEWA
        ++      + L+E   S  +  K  A WA
Subjt:  IQQSVSSKDFLSECLSSDDHLIKESAEWA

Q9FJD4 Importin subunit beta-14.8e-6285.61Show/hide
Query:  YAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL
        Y+MPMLQ AAELSAH+AG DDEMTEYTNSLRNGILEAYSGIFQGFK+S KTQLLIP+APHILQFLDSIY+ KDMDEVVMKTAIGVLGDLADTLGS+ G L
Subjt:  YAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL

Query:  IQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        IQQSVSSK+FL+ECLSS+DH IKE+AEWAK AI+RAIS+
Subjt:  IQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI

Arabidopsis top hitse value%identityAlignment
AT3G08943.1 ARM repeat superfamily protein1.3e-2541.91Show/hide
Query:  AMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSLI
        A+ ++Q AA++ A    +D+E+ +Y N LR  I EAYSGI QGFK + K +L++PYA H+LQF++ +      DE V K A+  +GDLAD +G N   L 
Subjt:  AMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSLI

Query:  QQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAI
        Q      +FL+ECL S+D  +K +A W +  I+R +
Subjt:  QQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAI

AT3G08947.1 ARM repeat superfamily protein3.7e-2542.54Show/hide
Query:  AMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSLI
        A+ ++Q AA++ A    +D+E+ +Y N LR  I EAYSGI QGFK + K +L++PYA H+LQF++ +      DE V K A+  +GDLAD +G N   L 
Subjt:  AMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSLI

Query:  QQSVSSKDFLSECLSSDDHLIKESAEWAKLAISR
        Q      +FL+ECL S+D  +K +A W +  I+R
Subjt:  QQSVSSKDFLSECLSSDDHLIKESAEWAKLAISR

AT5G53480.1 ARM repeat superfamily protein3.4e-6385.61Show/hide
Query:  YAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL
        Y+MPMLQ AAELSAH+AG DDEMTEYTNSLRNGILEAYSGIFQGFK+S KTQLLIP+APHILQFLDSIY+ KDMDEVVMKTAIGVLGDLADTLGS+ G L
Subjt:  YAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSL

Query:  IQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI
        IQQSVSSK+FL+ECLSS+DH IKE+AEWAK AI+RAIS+
Subjt:  IQQSVSSKDFLSECLSSDDHLIKESAEWAKLAISRAISI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCCATGCCCATGCTTCAAAGGGCAGCAGAGTTATCTGCACACACAGCAGGTATTGATGATGAAATGACCGAGTATACAAATTCTTTAAGAAATGGGATTTTGGA
GGCATATTCAGGCATCTTCCAAGGTTTCAAGAGCTCTCCGAAAACTCAGCTTTTGATCCCTTATGCACCTCATATACTTCAATTCTTGGATAGTATTTACATCAGAAAAG
ACATGGATGAAGTTGTTATGAAAACTGCCATTGGAGTCCTTGGAGATCTAGCCGACACACTGGGGAGCAATGCTGGTTCTTTGATTCAGCAATCTGTCTCAAGCAAAGAC
TTTTTGAGTGAATGTTTGTCCTCCGATGACCATTTGATTAAAGAATCTGCTGAATGGGCTAAGTTGGCCATCAGTCGTGCCATTTCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGCCATGCCCATGCTTCAAAGGGCAGCAGAGTTATCTGCACACACAGCAGGTATTGATGATGAAATGACCGAGTATACAAATTCTTTAAGAAATGGGATTTTGGA
GGCATATTCAGGCATCTTCCAAGGTTTCAAGAGCTCTCCGAAAACTCAGCTTTTGATCCCTTATGCACCTCATATACTTCAATTCTTGGATAGTATTTACATCAGAAAAG
ACATGGATGAAGTTGTTATGAAAACTGCCATTGGAGTCCTTGGAGATCTAGCCGACACACTGGGGAGCAATGCTGGTTCTTTGATTCAGCAATCTGTCTCAAGCAAAGAC
TTTTTGAGTGAATGTTTGTCCTCCGATGACCATTTGATTAAAGAATCTGCTGAATGGGCTAAGTTGGCCATCAGTCGTGCCATTTCAATTTAG
Protein sequenceShow/hide protein sequence
MYAMPMLQRAAELSAHTAGIDDEMTEYTNSLRNGILEAYSGIFQGFKSSPKTQLLIPYAPHILQFLDSIYIRKDMDEVVMKTAIGVLGDLADTLGSNAGSLIQQSVSSKD
FLSECLSSDDHLIKESAEWAKLAISRAISI