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Lag0000262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr4:2474536..2476582
RNA-Seq ExpressionLag0000262
SyntenyLag0000262
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017227899.1 PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus]3.7e-3363.64Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM
        MP+SV+RK GIGE RPTTVTLQL D S+ +PEGKIEDVLV VDKFIFP DFI+LDYEAD++VP+ILGRPFLATGR LIDVQ GELTMR    +       
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM

Query:  QDSASKHLEDYGEACFIDEQI
            S  +ED       DE I
Subjt:  QDSASKHLEDYGEACFIDEQI

XP_022155208.1 uncharacterized protein LOC111022348 [Momordica charantia]4.0e-3582.8Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGE
        MPLS+YRK G+GEARPTTVTLQL D SITYPEGKIEDVLV VDKFIFP DFIILDY+ADK+VP+ILGRPFL TGRAL+DVQKGELTMR    E
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGE

XP_022951570.1 uncharacterized protein LOC111454344 [Cucurbita moschata]3.7e-3371.84Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM
        MPLS+Y+K GIGEARPTTVTLQL D SITYPEGKIED+L+ VDKFIFP DFIILDYEAD DVP+ILGRPFL TGR L+DV KG +T+R   G+  +E  +
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM

Query:  QDS
         DS
Subjt:  QDS

XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]2.9e-3382.95Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR
        MP+S++RK GIGEARPTTVTLQL D S  +PEGKIEDVLV VDKFIFP DFI+LDYEADK+VP+ILGRPFLATGR LIDVQKGELTMR
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]4.9e-3359.54Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM
        MP+S +RK GIGEARPTTVTLQL D S+ +PEGKIEDVLV VDKFIFP DFIILDYEAD++VP+ILGRPFLATGRALIDVQ GE+TMR +  +       
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM

Query:  QDSASKHLEDYGEACFIDEQIFTVAHMKTVK
               +E+      ID  +    H K  K
Subjt:  QDSASKHLEDYGEACFIDEQIFTVAHMKTVK

TrEMBL top hitse value%identityAlignment
A0A6J1DFE5 uncharacterized protein LOC1110195972.6e-3284.09Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR
        MPLS+Y K GIGEARPTTVTLQL D SIT+PEGKIEDVLV VDKFIFP D IILDY+ADK+VP+ILGRPFLATGRAL+DV KGELTMR
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR

A0A6J1DMD0 uncharacterized protein LOC1110223481.9e-3582.8Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGE
        MPLS+YRK G+GEARPTTVTLQL D SITYPEGKIEDVLV VDKFIFP DFIILDY+ADK+VP+ILGRPFL TGRAL+DVQKGELTMR    E
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGE

A0A6J1DV77 uncharacterized protein LOC1110238182.6e-3282.95Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR
        MPLSVY+K GIGEARP TVTLQL D SITY EGKIEDVLV VDKFIFP DFIILDYEADK++P+ILGRPFL+TGRALIDV  GELT+R
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR

A0A6J1E1F3 uncharacterized protein LOC1110250656.9e-3382.95Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR
        MPLS+Y K GIGEARPT VTLQL D SIT+PEGKIEDVLV VDKF FP DFIILDY+ADK+VP+ILGRPFLATGRAL+DV KGELTMR
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMR

A0A6J1GJ68 uncharacterized protein LOC1114543441.8e-3371.84Show/hide
Query:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM
        MPLS+Y+K GIGEARPTTVTLQL D SITYPEGKIED+L+ VDKFIFP DFIILDYEAD DVP+ILGRPFL TGR L+DV KG +T+R   G+  +E  +
Subjt:  MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAM

Query:  QDS
         DS
Subjt:  QDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTTTCGGTCTATCGAAAGCCAGGTATTGGTGAAGCTAGGCCTACCACAGTCACACTTCAACTAGTTGATTGGTCTATCACATATCCTGAGGGAAAAATTGAGGA
TGTCTTAGTAAATGTAGATAAATTCATATTTCCTGTTGATTTCATTATTTTAGACTATGAGGCTGATAAAGATGTCCCAGTTATTCTAGGTCGTCCATTTTTGGCTACTG
GTAGGGCATTAATAGATGTTCAAAAAGGGGAATTAACAATGAGATTTGATTCTGGAGAACACATTATTGAGACAGCAATGCAGGATTCGGCTAGCAAGCATTTGGAAGAT
TATGGAGAGGCGTGCTTCATTGATGAGCAGATATTTACAGTAGCTCATATGAAGACAGTGAAAACACCTTGCCCCTTGAGTCTTCAATGGCCAAAACAAGAGCGAGAAAA
GAAGAGAGAAGGAGGAAGAAGAAGTACCTGTTACCCCCGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAGATGCTGGAGGAAAAATGAGCGAAAAGAAGGAGAAGGCAA
CAAAAGGCCGAGGATCAGGAGGCTCTACAGAAAGCGATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTTTCGGTCTATCGAAAGCCAGGTATTGGTGAAGCTAGGCCTACCACAGTCACACTTCAACTAGTTGATTGGTCTATCACATATCCTGAGGGAAAAATTGAGGA
TGTCTTAGTAAATGTAGATAAATTCATATTTCCTGTTGATTTCATTATTTTAGACTATGAGGCTGATAAAGATGTCCCAGTTATTCTAGGTCGTCCATTTTTGGCTACTG
GTAGGGCATTAATAGATGTTCAAAAAGGGGAATTAACAATGAGATTTGATTCTGGAGAACACATTATTGAGACAGCAATGCAGGATTCGGCTAGCAAGCATTTGGAAGAT
TATGGAGAGGCGTGCTTCATTGATGAGCAGATATTTACAGTAGCTCATATGAAGACAGTGAAAACACCTTGCCCCTTGAGTCTTCAATGGCCAAAACAAGAGCGAGAAAA
GAAGAGAGAAGGAGGAAGAAGAAGTACCTGTTACCCCCGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAGATGCTGGAGGAAAAATGAGCGAAAAGAAGGAGAAGGCAA
CAAAAGGCCGAGGATCAGGAGGCTCTACAGAAAGCGATGGATGA
Protein sequenceShow/hide protein sequence
MPLSVYRKPGIGEARPTTVTLQLVDWSITYPEGKIEDVLVNVDKFIFPVDFIILDYEADKDVPVILGRPFLATGRALIDVQKGELTMRFDSGEHIIETAMQDSASKHLED
YGEACFIDEQIFTVAHMKTVKTPCPLSLQWPKQEREKKREGGRRSTCYPRGTESENEEEEDAGGKMSEKKEKATKGRGSGGSTESDG