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Lag0000264 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000264
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:2520554..2521628
RNA-Seq ExpressionLag0000264
SyntenyLag0000264
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]1.6e-2250.48Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D++ GG+ +SKT   A  LLEEMA+ +YQW  ER +  +  GI+ELE  ++L AQ+A+L++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKS
        ++ +S
Subjt:  KVVKS

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]1.6e-2250.48Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D++ GG+ +SKT   A  LLEEMA+ +YQW  ER +  +  GI+ELE  ++L AQ+A+L++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKS
        ++ +S
Subjt:  KVVKS

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]3.5e-2248.62Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D++ GG+ +SKT   A  LLEEMA+ +YQW  ER +  +  GI++LE  ++L AQ+A+L++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKSISTL
        ++ +S   L
Subjt:  KVVKSISTL

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]8.9e-2660.4Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGI--VSRKFGIYELEESSSLKAQMASLTNALNKLT
        +LRRCPQHGYPDWLQ+QLFYNGL  STK++LD++ GGS  SK   +A  +LE++A TSY W  ER    + +  G+YE++E +SLKAQMASLTNAL+KLT
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGI--VSRKFGIYELEESSSLKAQMASLTNALNKLT

Query:  S
        +
Subjt:  S

XP_018813326.2 uncharacterized protein LOC108985472 [Juglans regia]7.8e-2251.43Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D+  GG+ +SKT   A  LLEEM + +YQW IER I  +  GI+ELE  ++L AQ+A+L++ +  LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKS
        ++ +S
Subjt:  KVVKS

TrEMBL top hitse value%identityAlignment
A0A2I4E1Q5 uncharacterized protein LOC1089854723.8e-2251.43Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D+  GG+ +SKT   A  LLEEM + +YQW IER I  +  GI+ELE  ++L AQ+A+L++ +  LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKS
        ++ +S
Subjt:  KVVKS

A0A2I4G4Q3 uncharacterized protein LOC1090047128.4e-2248.18Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG PDWLQVQ+FYNGLN  T+T++D + GG+ + KT+  A  LLEEMA+ +YQW IER +  +   I+ELE  ++L AQ+A+L++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKSISTLV
        ++ +S   +V
Subjt:  KVVKSISTLV

A0A6J1DU19 uncharacterized protein LOC1110243611.4e-2153.06Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLT
        +LR+CPQHG  +WLQ+Q+FYNGLN  T+T+LD++ GG+ LS+T   A  LL++MA  S+QW  ER    +  G+YE++E SSLKAQ+ +LTNA++KL+
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLT

A0A6P9DWY0 uncharacterized protein LOC1183440266.4e-2250.48Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++RRCPQHG  DWLQ Q+FYNGLN  T+T++D++ GG+ +SKT   A  LLEEMA+ +YQW IER +  +  GI+ELE  ++L AQ+ASL++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKS
        ++ +S
Subjt:  KVVKS

A0A6P9E7J9 uncharacterized protein LOC1183442384.6e-2047.27Show/hide
Query:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS
        ++R CPQHG PDWLQVQ+F NGLN  T+T++D + GG+ +SKT+  A  LLEEMA+ + QW  ER I  +  GI+ELE  ++L AQ A+L++ ++ LT+ 
Subjt:  MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSS

Query:  KVVKSISTLV
        ++ +S   +V
Subjt:  KVVKSISTLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGGCGATGCCCGCAGCATGGCTATCCAGATTGGCTCCAGGTGCAGTTATTTTACAATGGACTGAATCCCTCCACCAAGACAGTTTTAGACTCATCAGTAGGTGG
GAGTTTTCTTTCCAAGACAGTGACGAAAGCCAAGGATCTTCTAGAGGAAATGGCAGCAACTAGCTACCAGTGGCAGATTGAAAGGGGGATAGTTTCCAGGAAGTTTGGCA
TTTATGAATTAGAGGAGTCAAGTTCATTGAAGGCACAGATGGCATCATTGACAAACGCCCTGAACAAGCTGACTTCATCTAAGGTGGTCAAGTCCATTTCCACCTTAGTT
GAAGGATATTCAAAAAGGAAAATCAAGATGTGGAAGAAGTTCAGTATGTGGGAAATAGAGCATTCACTCAAGGAGTATCGAACTTCTACCATCCCAGTCTGCGCAATCAT
GAGAACTTTTCGTACTCCAACACCAAGAACGTATTACAGCCACCGCCAGGATTTGCTTCAACTAGTGCCCAGAAAAGAAGAGAAAGAAAAAGATGAAAAGCATGATGAAA
GGCATGAAGATAAGCTGAACGTGGAAAAGTGGTTCCATGAAACCATCATGACAAAGGCTCGCACATTAGCCAGCCCAAGCGGAGGGGCGAATGCTCTACCTTTGACTACC
GGGAGTTACCTTTTCCTCAGCGCTTTACAAATGTTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGGCGATGCCCGCAGCATGGCTATCCAGATTGGCTCCAGGTGCAGTTATTTTACAATGGACTGAATCCCTCCACCAAGACAGTTTTAGACTCATCAGTAGGTGG
GAGTTTTCTTTCCAAGACAGTGACGAAAGCCAAGGATCTTCTAGAGGAAATGGCAGCAACTAGCTACCAGTGGCAGATTGAAAGGGGGATAGTTTCCAGGAAGTTTGGCA
TTTATGAATTAGAGGAGTCAAGTTCATTGAAGGCACAGATGGCATCATTGACAAACGCCCTGAACAAGCTGACTTCATCTAAGGTGGTCAAGTCCATTTCCACCTTAGTT
GAAGGATATTCAAAAAGGAAAATCAAGATGTGGAAGAAGTTCAGTATGTGGGAAATAGAGCATTCACTCAAGGAGTATCGAACTTCTACCATCCCAGTCTGCGCAATCAT
GAGAACTTTTCGTACTCCAACACCAAGAACGTATTACAGCCACCGCCAGGATTTGCTTCAACTAGTGCCCAGAAAAGAAGAGAAAGAAAAAGATGAAAAGCATGATGAAA
GGCATGAAGATAAGCTGAACGTGGAAAAGTGGTTCCATGAAACCATCATGACAAAGGCTCGCACATTAGCCAGCCCAAGCGGAGGGGCGAATGCTCTACCTTTGACTACC
GGGAGTTACCTTTTCCTCAGCGCTTTACAAATGTTAAATTAG
Protein sequenceShow/hide protein sequence
MLRRCPQHGYPDWLQVQLFYNGLNPSTKTVLDSSVGGSFLSKTVTKAKDLLEEMAATSYQWQIERGIVSRKFGIYELEESSSLKAQMASLTNALNKLTSSKVVKSISTLV
EGYSKRKIKMWKKFSMWEIEHSLKEYRTSTIPVCAIMRTFRTPTPRTYYSHRQDLLQLVPRKEEKEKDEKHDERHEDKLNVEKWFHETIMTKARTLASPSGGANALPLTT
GSYLFLSALQMLN