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Lag0000282 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000282
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr4:2892636..2893082
RNA-Seq ExpressionLag0000282
SyntenyLag0000282
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.2e-3654.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE+KK+KRL +LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D Q+
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]8.4e-3856.85Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQEEKK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D QE
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]3.5e-3654.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE KK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D  +
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

KAA0055607.1 Gag-pro-like protein [Cucumis melo var. makuwa]2.7e-3654.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LN+NLE LL   SN G FGLGYKP+  DKIRLQEEKK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  +   E + +YAC PDFELNNWD VDLP  S+D QE
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]1.2e-3655.48Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE+KK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D Q+
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein5.9e-3754.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE+KK+KRL +LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D Q+
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

A0A5A7T5W2 Retrotrans_gag domain-containing protein4.1e-3856.85Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQEEKK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D QE
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.7e-3654.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE KK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D  +
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

A0A5A7UM01 Gag-pro-like protein1.3e-3654.79Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LN+NLE LL   SN G FGLGYKP+  DKIRLQEEKK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  +   E + +YAC PDFELNNWD VDLP  S+D QE
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

A0A5D3DEB3 Retrotrans_gag domain-containing protein5.9e-3755.48Show/hide
Query:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME
        + + M T+++  GGY LNKNLE LL I SN G FGLGYKP+  DKIRLQE+KK+KRLA+LE +   PS+K +P LYD FKSAG+S+S+ +S   D LL +
Subjt:  RAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLME

Query:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE
        + +LS+A +  E   E + +YAC PDFELNNWD VDLP  S+D Q+
Subjt:  VRNLSIATIVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGGGCGAAAGAAATGGCAACTAAAGTAGTGGTAAATGGAGGATATCAGTTGAATAAAAACTTAGAAAGGTTGCTGAGCATACGAAGCAATGTTGGGACATTTGG
GTTGGGCTATAAGCCTACCAAATGTGATAAAATTAGACTTCAGGAAGAAAAGAAAGAAAAACGATTGGCCAGGTTAGAAGGAAAGGGATCCACTCCAAGTCTCAAAAGTT
TACCATCATTGTATGATAACTTCAAAAGTGCTGGTTTGAGCTTCTCAACGTTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTGTCGATCGCAACA
ATTGTTAATGAGCTACCACACGAAGAGGACATAATCTATGCATGTTCACCTGATTTCGAGCTTAACAATTGGGATGGTGTAGATCTACCTATAATTTCACAAGATTTGCA
AGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGGGCGAAAGAAATGGCAACTAAAGTAGTGGTAAATGGAGGATATCAGTTGAATAAAAACTTAGAAAGGTTGCTGAGCATACGAAGCAATGTTGGGACATTTGG
GTTGGGCTATAAGCCTACCAAATGTGATAAAATTAGACTTCAGGAAGAAAAGAAAGAAAAACGATTGGCCAGGTTAGAAGGAAAGGGATCCACTCCAAGTCTCAAAAGTT
TACCATCATTGTATGATAACTTCAAAAGTGCTGGTTTGAGCTTCTCAACGTTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTGTCGATCGCAACA
ATTGTTAATGAGCTACCACACGAAGAGGACATAATCTATGCATGTTCACCTGATTTCGAGCTTAACAATTGGGATGGTGTAGATCTACCTATAATTTCACAAGATTTGCA
AGAGTAA
Protein sequenceShow/hide protein sequence
MFRAKEMATKVVVNGGYQLNKNLERLLSIRSNVGTFGLGYKPTKCDKIRLQEEKKEKRLARLEGKGSTPSLKSLPSLYDNFKSAGLSFSTLDSYSTDHLLMEVRNLSIAT
IVNELPHEEDIIYACSPDFELNNWDGVDLPIISQDLQE