; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000292 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000292
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:3080548..3081801
RNA-Seq ExpressionLag0000292
SyntenyLag0000292
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR37449.1 hypothetical protein CICLE_v10030074mg [Citrus clementina]1.2e-0430.84Show/hide
Query:  KEVFSGANPYEWLHQVERYFVVNHLADSEKIEAVFEDYS----------------VPLENLDNAT-------LVDGLKKDIKIKLRVARPIGLDMIMETA
        K +F G+NP  W+ + ERYF VN L++ EK+EA    +                 +  E + N T        ++GLK +I++++R+  P  L   M+ A
Subjt:  KEVFSGANPYEWLHQVERYFVVNHLADSEKIEAVFEDYS----------------VPLENLDNAT-------LVDGLKKDIKIKLRVARPIGLDMIMETA

Query:  QKLEDEL
        QK+E++L
Subjt:  QKLEDEL
KAF7810390.1 Retrotransposable element Tf2 [Senna tora]2.8e-0425.67Show/hide
Query:  VFSGANPYEWLHQVERYFVVNHLADSEKIEAV----------------------FEDYSVPLENLDNATLV----DGLKKDIKIKLRVARPIGLDMIMET
        +F+G +P  WL +VERYF+VN +   EK++ V                      FE  S PL++     L+    +GLK++++ +LR+ +   L  IM+ 
Subjt:  VFSGANPYEWLHQVERYFVVNHLADSEKIEAV----------------------FEDYSVPLENLDNATLV----DGLKKDIKIKLRVARPIGLDMIMET

Query:  AQKLEDELMHFEEGPVANIANWPKIYTDLAAVLLPNFHGKDDHRRRFDGGAATNGDSLHARYSSHGGPRGRPRTGKTSEKTTPYSTS
        +QK+E      E   V N     ++   L  + LP +             + +N   L+A  S+    +     G T ++T   STS
Subjt:  AQKLEDELMHFEEGPVANIANWPKIYTDLAAVLLPNFHGKDDHRRRFDGGAATNGDSLHARYSSHGGPRGRPRTGKTSEKTTPYSTS
TrEMBL top hitse value%identityAlignment
V4UDR6 Uncharacterized protein6.0e-0530.84Show/hide
Query:  KEVFSGANPYEWLHQVERYFVVNHLADSEKIEAVFEDYS----------------VPLENLDNAT-------LVDGLKKDIKIKLRVARPIGLDMIMETA
        K +F G+NP  W+ + ERYF VN L++ EK+EA    +                 +  E + N T        ++GLK +I++++R+  P  L   M+ A
Subjt:  KEVFSGANPYEWLHQVERYFVVNHLADSEKIEAVFEDYS----------------VPLENLDNAT-------LVDGLKKDIKIKLRVARPIGLDMIMETA

Query:  QKLEDEL
        QK+E++L
Subjt:  QKLEDEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTATATTGAGATGGCTCTACAACTGAAGGAAGGCTTTAAAGAGGTGTTTTCTGGAGCAAATCCTTATGAATGGCTTCATCAGGTTGAGAGATATTTCGTTGT
CAATCATCTGGCTGACTCTGAGAAGATCGAAGCGGTGTTTGAGGACTATTCCGTGCCATTGGAAAACTTGGATAACGCAACCCTTGTCGATGGGCTGAAAAAGGATATCA
AGATCAAGTTACGAGTGGCAAGGCCTATTGGGCTTGACATGATTATGGAGACGGCCCAGAAGTTAGAAGATGAGTTGATGCATTTTGAAGAAGGGCCGGTTGCAAATATA
GCAAACTGGCCCAAAATATATACAGATTTAGCAGCCGTTCTTCTCCCAAATTTCCACGGTAAAGATGATCACCGCCGCCGTTTCGATGGCGGCGCTGCAACGAATGGGGA
CTCTCTACATGCGAGGTACTCGAGCCATGGCGGACCTCGCGGTCGTCCACGTACCGGAAAGACGTCGGAGAAGACGACTCCGTATTCAACTTCCCCTCACCGTTTTCTCA
GAGACTGTTTTCTATCAGTGATAGAAAACTTCTATCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTATATTGAGATGGCTCTACAACTGAAGGAAGGCTTTAAAGAGGTGTTTTCTGGAGCAAATCCTTATGAATGGCTTCATCAGGTTGAGAGATATTTCGTTGT
CAATCATCTGGCTGACTCTGAGAAGATCGAAGCGGTGTTTGAGGACTATTCCGTGCCATTGGAAAACTTGGATAACGCAACCCTTGTCGATGGGCTGAAAAAGGATATCA
AGATCAAGTTACGAGTGGCAAGGCCTATTGGGCTTGACATGATTATGGAGACGGCCCAGAAGTTAGAAGATGAGTTGATGCATTTTGAAGAAGGGCCGGTTGCAAATATA
GCAAACTGGCCCAAAATATATACAGATTTAGCAGCCGTTCTTCTCCCAAATTTCCACGGTAAAGATGATCACCGCCGCCGTTTCGATGGCGGCGCTGCAACGAATGGGGA
CTCTCTACATGCGAGGTACTCGAGCCATGGCGGACCTCGCGGTCGTCCACGTACCGGAAAGACGTCGGAGAAGACGACTCCGTATTCAACTTCCCCTCACCGTTTTCTCA
GAGACTGTTTTCTATCAGTGATAGAAAACTTCTATCACTGA
Protein sequenceShow/hide protein sequence
MGNYIEMALQLKEGFKEVFSGANPYEWLHQVERYFVVNHLADSEKIEAVFEDYSVPLENLDNATLVDGLKKDIKIKLRVARPIGLDMIMETAQKLEDELMHFEEGPVANI
ANWPKIYTDLAAVLLPNFHGKDDHRRRFDGGAATNGDSLHARYSSHGGPRGRPRTGKTSEKTTPYSTSPHRFLRDCFLSVIENFYH