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Lag0000300 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000300
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr4:3158410..3158879
RNA-Seq ExpressionLag0000300
SyntenyLag0000300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045111.1 putative glutathione S-transferase isoform X1 [Cucumis melo var. makuwa]6.5e-1039.29Show/hide
Query:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL
        T+ K+IW  L  I+++R LA+ M+ + KL  ++KG                             HIL+IL+GLG++Y+SM+SVI+ +    +VQ+VMSLL
Subjt:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL

Query:  LTQEKRIESKLT
        LTQE +IESK+T
Subjt:  LTQEKRIESKLT

KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-1142.74Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL+GLGSDY+SM+SVI+ +    +VQEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

KAA0053143.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]1.0e-1040.32Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL GLG DY+SM+S+I+ +    ++QEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P+V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-1142.74Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL+GLGSDY+SM+SVI+ +    +VQEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

XP_022158089.1 uncharacterized protein LOC111024658 [Momordica charantia]4.4e-1442.86Show/hide
Query:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL
        +T KEIW  L Q+F T+NL ++M+++T+LQ ++KGG                            HI+ ILSGLGS+YES VSVIT K GPLT+Q+V +LL
Subjt:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL

Query:  LTQEKRIESKLT
        L+ ++RIE +++
Subjt:  LTQEKRIESKLT

TrEMBL top hitse value%identityAlignment
A0A5A7TUB3 Putative glutathione S-transferase isoform X13.2e-1039.29Show/hide
Query:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL
        T+ K+IW  L  I+++R LA+ M+ + KL  ++KG                             HIL+IL+GLG++Y+SM+SVI+ +    +VQ+VMSLL
Subjt:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL

Query:  LTQEKRIESKLT
        LTQE +IESK+T
Subjt:  LTQEKRIESKLT

A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-949.8e-1242.74Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL+GLGSDY+SM+SVI+ +    +VQEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

A0A5A7UB21 Keratin, type II cytoskeletal 1-like4.9e-1140.32Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL GLG DY+SM+S+I+ +    ++QEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P+V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-949.8e-1242.74Show/hide
Query:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ
        KEIW  L  IF++R LAQ M+ + KL  I+KG                             HIL+IL+GLGSDY+SM+SVI+ +    +VQEVMSLLLTQ
Subjt:  KEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGW--------------------------GHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQ

Query:  EKRIESKLTLVEGLVPFVILMVQS
        E + ESKL + E  +P V ++ Q+
Subjt:  EKRIESKLTLVEGLVPFVILMVQS

A0A6J1DYD5 uncharacterized protein LOC1110246582.1e-1442.86Show/hide
Query:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL
        +T KEIW  L Q+F T+NL ++M+++T+LQ ++KGG                            HI+ ILSGLGS+YES VSVIT K GPLT+Q+V +LL
Subjt:  TTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWG--------------------------HILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLL

Query:  LTQEKRIESKLT
        L+ ++RIE +++
Subjt:  LTQEKRIESKLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGATAGGACAAGGTAATCTCATCTTGGCTCGTTGGGTCCATGACGGAAGATCTGCTTCATCAAATGATTACACCACGCCCAAGGAAATATGGACCTACCTTCA
TCAGATTTTCACAACTCGTAATCTCGCCCAGATGATGAAGATCGAAACCAAGCTTCAAACGATTCAAAAAGGAGGTTGGGGTCACATACTGTTTATACTCTCTGGTCTTG
GTTCTGATTACGAGTCAATGGTTTCTGTTATCACGACTAAAATTGGTCCTCTGACTGTTCAGGAAGTGATGTCTCTACTCCTTACTCAAGAAAAGCGCATCGAAAGCAAA
CTTACTCTTGTTGAAGGCTTGGTCCCGTTTGTGATCCTTATGGTTCAATCCAAACTACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGATAGGACAAGGTAATCTCATCTTGGCTCGTTGGGTCCATGACGGAAGATCTGCTTCATCAAATGATTACACCACGCCCAAGGAAATATGGACCTACCTTCA
TCAGATTTTCACAACTCGTAATCTCGCCCAGATGATGAAGATCGAAACCAAGCTTCAAACGATTCAAAAAGGAGGTTGGGGTCACATACTGTTTATACTCTCTGGTCTTG
GTTCTGATTACGAGTCAATGGTTTCTGTTATCACGACTAAAATTGGTCCTCTGACTGTTCAGGAAGTGATGTCTCTACTCCTTACTCAAGAAAAGCGCATCGAAAGCAAA
CTTACTCTTGTTGAAGGCTTGGTCCCGTTTGTGATCCTTATGGTTCAATCCAAACTACTCTAA
Protein sequenceShow/hide protein sequence
MEAIGQGNLILARWVHDGRSASSNDYTTPKEIWTYLHQIFTTRNLAQMMKIETKLQTIQKGGWGHILFILSGLGSDYESMVSVITTKIGPLTVQEVMSLLLTQEKRIESK
LTLVEGLVPFVILMVQSKLL