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Lag0000301 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000301
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:3173236..3174070
RNA-Seq ExpressionLag0000301
SyntenyLag0000301
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU51071.1 hypothetical protein TSUD_84300 [Trifolium subterraneum]1.8e-1476.92Show/hide
Query:  AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        +VW+S+LSGG G+SPLEGG GEGESPV LGPCRTT  C+RVGLFGNA PI R
Subjt:  AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

KAF7800466.1 hypothetical protein G2W53_045122 [Senna tora]2.3e-1783.64Show/hide
Query:  RPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        RP  VWRSVLSGGPG SPLEGG GEGESPV  GPCRTTRRC+RVGLFGNA PI R
Subjt:  RPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

KAG5129004.1 hypothetical protein JHK84_035401 [Glycine max]1.8e-1783.64Show/hide
Query:  RPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        RPN VWRSVLSGGPG SPLEGG  EGESPV  GPCRTTRRC+RVGLFGNA PI R
Subjt:  RPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

KAG5568967.1 hypothetical protein H5410_064011 [Solanum commersonii]4.1e-1453.33Show/hide
Query:  STTLAVDSINKLYQWNSSSDEVLGSRPN----------AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        S ++++    + Y+ + S+ E  G+ P            VWRSVLSGGPG SPLEGG  EGESPV  GPCRTTRRC RVGLFGNA  I R
Subjt:  STTLAVDSINKLYQWNSSSDEVLGSRPN----------AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

TKY53825.1 hypothetical protein E2542_SST25368 [Spatholobus suberectus]9.7e-1673.02Show/hide
Query:  SSDEVLGSRPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        +S + LG    +VWRSVLSGGPG SPLEGG  EGESPV  GPCRTTRRC+RVGLFGNA PI R
Subjt:  SSDEVLGSRPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

TrEMBL top hitse value%identityAlignment
A0A2K3KU78 Uncharacterized protein (Fragment)2.9e-1384.44Show/hide
Query:  SGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        SGGPG SPLEGG GEGESPV +GPCRTTRRC+RVGLFGNA PI R
Subjt:  SGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

A0A2N9IL11 Uncharacterized protein1.2e-1686.27Show/hide
Query:  VWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        VWRSVLSGGPG SPLEGG GEGESPV  GPCRTTRRC+RVGLFGNA PI R
Subjt:  VWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

A0A2Z6P3S7 Retrotrans_gag domain-containing protein8.9e-1576.92Show/hide
Query:  AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        +VW+S+LSGG G+SPLEGG GEGESPV LGPCRTT  C+RVGLFGNA PI R
Subjt:  AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

A0A5N6QUZ5 Uncharacterized protein1.7e-1368.42Show/hide
Query:  GSRPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        G + +AVWRSVL GGP   PLEGG  +GE+PV  GPC TTRRCQRV LFGNA PI R
Subjt:  GSRPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

M1D9E9 Uncharacterized protein2.0e-1453.33Show/hide
Query:  STTLAVDSINKLYQWNSSSDEVLGSRPN----------AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR
        S ++++    + Y+ + S+ E  G+ P            VWRSVLSGGPG SPLEGG  EGESPV  GPCRTTRRC RVGLFGNA  I R
Subjt:  STTLAVDSINKLYQWNSSSDEVLGSRPN----------AVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTGCGTCTTCTTCAAGCTCTTCTTCAATCGACAGCACCACTTTGGCCGTCGATAGTATCAACAAGCTTTATCAATGGAACTCCAGCTCCGATGAAGTACTTGG
ATCCCGCCCAAACGCAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGTCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTC
GCACCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGACCCAATCAGGCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTGCGTCTTCTTCAAGCTCTTCTTCAATCGACAGCACCACTTTGGCCGTCGATAGTATCAACAAGCTTTATCAATGGAACTCCAGCTCCGATGAAGTACTTGG
ATCCCGCCCAAACGCAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGTCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTC
GCACCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGACCCAATCAGGCGGTAA
Protein sequenceShow/hide protein sequence
MASASSSSSSSIDSTTLAVDSINKLYQWNSSSDEVLGSRPNAVWRSVLSGGPGTSPLEGGVGEGESPVALGPCRTTRRCQRVGLFGNADPIRR