; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:4069082..4071568
RNA-Seq ExpressionLag0000326
SyntenyLag0000326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY94785.1 hypothetical protein Acr_10g0001700 [Actinidia rufa]1.8e-2130.58Show/hide
Query:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQCNEVVQVEGYDDRVAITTVILGYRTR---------------
        ++A +  KFKLP     Y+GK DP  HLD+Y+S M   G S+    RAFS TLTG AR     +     D    ++ + +    R               
Subjt:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQCNEVVQVEGYDDRVAITTVILGYRTR---------------

Query:  -------------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGG-------SRIGRGNQWPEAQE-----
                                 + + K GYL+++V    +R    + E   G N   + +I+TI GG   G        R  R    P  +E     
Subjt:  -------------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGG-------SRIGRGNQWPEAQE-----

Query:  ----------------ASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIEL
                          G+H PH+DALVVS  I N    R+L+D GSSAD+L    FE MK+G  +L P  TPL+GFGG    P G I L
Subjt:  ----------------ASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIEL

GFZ06814.1 hypothetical protein Acr_18g0009840 [Actinidia rufa]1.1e-2130.22Show/hide
Query:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ-----------------------------CNEVVQVE----
        ++A +  KFKLP     Y+GK DP  HLD+Y+S +   G S+   C+AFS TL G AR                                E+ + +    
Subjt:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ-----------------------------CNEVVQVE----

Query:  GYDD--RVAITTVILGYRTRESLIK--------------------EGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTILGGPAGG----------
        G DD  R    T  + YR      +                    EGYL+++V    +    P   +   G+N P+  +I+TI GG   G          
Subjt:  GYDD--RVAITTVILGYRTRESLIK--------------------EGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTILGGPAGG----------

Query:  ---------------SRIGRGNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVM
                       S    G+Q P      +  G+H PH+DALVVS  I N  V R+L+D GSSAD+L    FE MK+G  +L P  TPL+GFGG    
Subjt:  ---------------SRIGRGNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVM

Query:  PEGSIELPCGVNRKLPENLTL
        P G I LP  +  + P  +T+
Subjt:  PEGSIELPCGVNRKLPENLTL

XP_023894989.1 uncharacterized protein LOC112006903 [Quercus suber]2.7e-2529.93Show/hide
Query:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI
        +P KFK+P    YDG +DP  H+ T+++ M   G  +   CRAF  TL G AR+                            E + V+  DD++ +    
Subjt:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI

Query:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN
         G  +                       E+LI++G L+ FV G + +  +   +     +  P  EI+ I+GG + G                   GR  
Subjt:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN

Query:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP
        +  E          +EA  IH PH+DA+V++L I + +  RVLVD GSSAD+L    F+ M++GQ +LRP+ +PL+GFGG KV P G+I LP  V    P
Subjt:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP

Query:  ENLT
        + +T
Subjt:  ENLT

XP_023900876.1 uncharacterized protein LOC112012715 [Quercus suber]2.7e-2529.93Show/hide
Query:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI
        +P KFK+P    YDG +DP  H+ T+++ M   G  +   CRAF  TL G AR+                            E + V+  DD++ +    
Subjt:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI

Query:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN
         G  +                       E+LI++G L+ FV G + +  +   +     +  P  EI+ I+GG + G                   GR  
Subjt:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN

Query:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP
        +  E          +EA  IH PH+DA+V++L I + +  RVLVD GSSAD+L    F+ M++GQ +LRP+ +PL+GFGG KV P G+I LP  V    P
Subjt:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP

Query:  ENLT
        + +T
Subjt:  ENLT

XP_023902033.1 uncharacterized protein LOC112013883 [Quercus suber]2.7e-2529.93Show/hide
Query:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI
        +P KFK+P    YDG +DP  H+ T+++ M   G  +   CRAF  TL G AR+                            E + V+  DD++ +    
Subjt:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ--------------------------CNEVVQVEGYDDRVAITTVI

Query:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN
         G  +                       E+LI++G L+ FV G + +  +   +     +  P  EI+ I+GG + G                   GR  
Subjt:  LGYRTR----------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRI----------------GRGN

Query:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP
        +  E          +EA  IH PH+DA+V++L I + +  RVLVD GSSAD+L    F+ M++GQ +LRP+ +PL+GFGG KV P G+I LP  V    P
Subjt:  QWPEA---------QEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP

Query:  ENLT
        + +T
Subjt:  ENLT

TrEMBL top hitse value%identityAlignment
A0A2N9FQJ5 Ribonuclease H4.2e-2428.1Show/hide
Query:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIAR------------------------------------QCNEVVQVEG-
        +P +FK+P+   +DG KDP  +L+ +++ M+     E   CRAF L L G AR                                        V Q+EG 
Subjt:  VPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIAR------------------------------------QCNEVVQVEG-

Query:  --------------------------------YDDRVAITTVILGYRTR-ESLIKEGYLKEFV-KGEESRGSRPTGEDHNGGNNDPSL--EIKTILGGPA
                                        + D   +T   +  + + E+LI++G L+++V +   +R ++P  +      N P    EI+TI+GGPA
Subjt:  --------------------------------YDDRVAITTVILGYRTR-ESLIKEGYLKEFV-KGEESRGSRPTGEDHNGGNNDPSL--EIKTILGGPA

Query:  GGSRIGRGNQWPEAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP
         G       +    Q+A G HQPH+DALV+++ I      RV+VD GSSAD+L    ++ M+L + +LRP   PLVGF G+K+ P G + LP  V     
Subjt:  GGSRIGRGNQWPEAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELPCGVNRKLP

Query:  ENLTLR
        + +  R
Subjt:  ENLTLR

A0A6J1DP33 uncharacterized protein LOC1110228861.5e-2144.6Show/hide
Query:  ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRIGRGNQWPEAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVL
        E LI+ GYLKE+V+  ++       ++    +N P  EI+TI+                   EA+ +  PHNDALV++L I NA+VHR+LVDGGSS  ++
Subjt:  ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGGSRIGRGNQWPEAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVL

Query:  STKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELP
        S   ++AM LG+K L+ S  PLVGFGGE+V+PEG IELP
Subjt:  STKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIELP

A0A7J0F7W2 Integrase catalytic domain-containing protein8.7e-2230.58Show/hide
Query:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQCNEVVQVEGYDDRVAITTVILGYRTR---------------
        ++A +  KFKLP     Y+GK DP  HLD+Y+S M   G S+    RAFS TLTG AR     +     D    ++ + +    R               
Subjt:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQCNEVVQVEGYDDRVAITTVILGYRTR---------------

Query:  -------------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGG-------SRIGRGNQWPEAQE-----
                                 + + K GYL+++V    +R    + E   G N   + +I+TI GG   G        R  R    P  +E     
Subjt:  -------------------------ESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSLEIKTILGGPAGG-------SRIGRGNQWPEAQE-----

Query:  ----------------ASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIEL
                          G+H PH+DALVVS  I N    R+L+D GSSAD+L    FE MK+G  +L P  TPL+GFGG    P G I L
Subjt:  ----------------ASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSIEL

A0A7J0G7N5 Integrase catalytic domain-containing protein5.1e-2230.22Show/hide
Query:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ-----------------------------CNEVVQVE----
        ++A +  KFKLP     Y+GK DP  HLD+Y+S +   G S+   C+AFS TL G AR                                E+ + +    
Subjt:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQ-----------------------------CNEVVQVE----

Query:  GYDD--RVAITTVILGYRTRESLIK--------------------EGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTILGGPAGG----------
        G DD  R    T  + YR      +                    EGYL+++V    +    P   +   G+N P+  +I+TI GG   G          
Subjt:  GYDD--RVAITTVILGYRTRESLIK--------------------EGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTILGGPAGG----------

Query:  ---------------SRIGRGNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVM
                       S    G+Q P      +  G+H PH+DALVVS  I N  V R+L+D GSSAD+L    FE MK+G  +L P  TPL+GFGG    
Subjt:  ---------------SRIGRGNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVM

Query:  PEGSIELPCGVNRKLPENLTL
        P G I LP  +  + P  +T+
Subjt:  PEGSIELPCGVNRKLPENLTL

A0A7J0G862 Integrase catalytic domain-containing protein1.5e-2129.54Show/hide
Query:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIAR--------------------------QCNE------------
        ++  +  KFKLP     Y+GK DP  HLD+Y+S M   G S+   C+AFS TL G AR                           C              
Subjt:  MQAEVPHKFKLPI-FPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIAR--------------------------QCNE------------

Query:  -----------------VVQVEGYDDRVAITTVILGYR-----------------TRESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTI
                         V+ VE   D+V I  ++ G R                   +S   +GYL++++         P   +   G+N P+   IKTI
Subjt:  -----------------VVQVEGYDDRVAITTVILGYR-----------------TRESLIKEGYLKEFVKGEESRGSRPTGEDHNGGNNDPSL-EIKTI

Query:  LGGPAGG-------SRIGR------------------GNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKR
         GG   G        R  R                   +Q P    + +  G+H PH+DALVVS  I N  V R+L+D GSSAD+L    FE MK+G  +
Subjt:  LGGPAGG-------SRIGR------------------GNQWP---EAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKR

Query:  LRPSMTPLVGFGGEKVMPEGSIELP
        L P  TPL+GFGG    P G I LP
Subjt:  LRPSMTPLVGFGGEKVMPEGSIELP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCGGAGGTTCCGCATAAGTTTAAGTTACCGATCTTCCCACAGTATGACGGGAAGAAGGACCCGACTCAACATTTGGATACCTACCGATCTTGGATGGAGTTTCA
TGGTGCTTCCGAGGCAACCAAATGTCGTGCTTTCTCTCTAACTTTGACTGGGATAGCACGACAATGCAATGAGGTTGTGCAGGTAGAAGGGTACGATGACAGAGTAGCCA
TAACAACCGTTATTTTGGGTTATAGGACGAGAGAGAGTCTGATCAAAGAAGGATATCTAAAGGAGTTTGTCAAGGGTGAGGAGAGCAGGGGGTCGAGGCCGACCGGAGAA
GATCATAATGGAGGAAATAATGACCCTTCGTTGGAAATCAAAACAATTTTAGGAGGGCCAGCAGGGGGGAGTCGAATCGGAAGAGGAAACCAGTGGCCCGAGGCGCAAGA
GGCCTCCGGTATCCATCAACCTCACAATGACGCACTAGTGGTAAGCTTGACGATTACCAACGCACGGGTTCACCGAGTATTAGTTGATGGCGGAAGCTCAGCGGATGTTT
TGTCTACAAAAGTGTTTGAGGCAATGAAGTTGGGGCAGAAGCGACTGAGGCCGAGCATGACACCGCTGGTTGGTTTCGGGGGAGAAAAGGTGATGCCAGAGGGGAGCATT
GAGTTGCCCTGCGGGGTGAACAGAAAGCTTCCCGAGAATCTTACTTTACGGCGCTCAGGGAAACAGGCAAGCAAGCAAGGCAACCTAGCCCACAGGCAGACGGAGGCTGA
GGCCGACCAGGCCGAGGCCGAGCAGAGGAACATCCTTCGCCAATGGAGCAATGATTGCTACTCCTTTATCTTTTTATTTTTATCGTTTTCTGCATACATTGGTTATATTT
CTGTTGTTTCCCAGGATTTGCGTTTACTAATGAGTGGCAACGCCTATACTTCTAAAGCGCTCGGTGGAGTGGCAACGCCTATACTCCCCGGGGGTAAACAGTGGCTAGTA
GAACTTCGGAAAGGAGTCATACCAGTAGAAGAGGGTGCAAAGACGTTAAAGCTTCAAGGCGTGTACGCCGAGGCCGAGCAGGCTGAGGTCGAGCATGCCGAGGGCGACCT
GGCTGACCACACAGGTTTAATTTGCTCATGGTTTCTGATTTCTTTGTTGCATATGGCTAGTGGCCTCTATGTTAGTTTCGTTGCAGATATAGAAACTTGTTCATGTGCGG
GCTTGAGAAGTGAAGTTGATAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCGGAGGTTCCGCATAAGTTTAAGTTACCGATCTTCCCACAGTATGACGGGAAGAAGGACCCGACTCAACATTTGGATACCTACCGATCTTGGATGGAGTTTCA
TGGTGCTTCCGAGGCAACCAAATGTCGTGCTTTCTCTCTAACTTTGACTGGGATAGCACGACAATGCAATGAGGTTGTGCAGGTAGAAGGGTACGATGACAGAGTAGCCA
TAACAACCGTTATTTTGGGTTATAGGACGAGAGAGAGTCTGATCAAAGAAGGATATCTAAAGGAGTTTGTCAAGGGTGAGGAGAGCAGGGGGTCGAGGCCGACCGGAGAA
GATCATAATGGAGGAAATAATGACCCTTCGTTGGAAATCAAAACAATTTTAGGAGGGCCAGCAGGGGGGAGTCGAATCGGAAGAGGAAACCAGTGGCCCGAGGCGCAAGA
GGCCTCCGGTATCCATCAACCTCACAATGACGCACTAGTGGTAAGCTTGACGATTACCAACGCACGGGTTCACCGAGTATTAGTTGATGGCGGAAGCTCAGCGGATGTTT
TGTCTACAAAAGTGTTTGAGGCAATGAAGTTGGGGCAGAAGCGACTGAGGCCGAGCATGACACCGCTGGTTGGTTTCGGGGGAGAAAAGGTGATGCCAGAGGGGAGCATT
GAGTTGCCCTGCGGGGTGAACAGAAAGCTTCCCGAGAATCTTACTTTACGGCGCTCAGGGAAACAGGCAAGCAAGCAAGGCAACCTAGCCCACAGGCAGACGGAGGCTGA
GGCCGACCAGGCCGAGGCCGAGCAGAGGAACATCCTTCGCCAATGGAGCAATGATTGCTACTCCTTTATCTTTTTATTTTTATCGTTTTCTGCATACATTGGTTATATTT
CTGTTGTTTCCCAGGATTTGCGTTTACTAATGAGTGGCAACGCCTATACTTCTAAAGCGCTCGGTGGAGTGGCAACGCCTATACTCCCCGGGGGTAAACAGTGGCTAGTA
GAACTTCGGAAAGGAGTCATACCAGTAGAAGAGGGTGCAAAGACGTTAAAGCTTCAAGGCGTGTACGCCGAGGCCGAGCAGGCTGAGGTCGAGCATGCCGAGGGCGACCT
GGCTGACCACACAGGTTTAATTTGCTCATGGTTTCTGATTTCTTTGTTGCATATGGCTAGTGGCCTCTATGTTAGTTTCGTTGCAGATATAGAAACTTGTTCATGTGCGG
GCTTGAGAAGTGAAGTTGATAATCCTTGA
Protein sequenceShow/hide protein sequence
MQAEVPHKFKLPIFPQYDGKKDPTQHLDTYRSWMEFHGASEATKCRAFSLTLTGIARQCNEVVQVEGYDDRVAITTVILGYRTRESLIKEGYLKEFVKGEESRGSRPTGE
DHNGGNNDPSLEIKTILGGPAGGSRIGRGNQWPEAQEASGIHQPHNDALVVSLTITNARVHRVLVDGGSSADVLSTKVFEAMKLGQKRLRPSMTPLVGFGGEKVMPEGSI
ELPCGVNRKLPENLTLRRSGKQASKQGNLAHRQTEAEADQAEAEQRNILRQWSNDCYSFIFLFLSFSAYIGYISVVSQDLRLLMSGNAYTSKALGGVATPILPGGKQWLV
ELRKGVIPVEEGAKTLKLQGVYAEAEQAEVEHAEGDLADHTGLICSWFLISLLHMASGLYVSFVADIETCSCAGLRSEVDNP