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Lag0000332 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000332
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022231
Genome locationchr4:4293014..4294430
RNA-Seq ExpressionLag0000332
SyntenyLag0000332
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]2.9e-0952.87Show/hide
Query:  RTLSKVIAPTQPNSKNNHKIARSPRIHRTYVTRYRTRI-MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDP
        R LS++        K   KIARS   HRTY TR R R+ ME+Q  E EKTRKDIEELREK+D IL+ALE+GK   D   SS+ +++P
Subjt:  RTLSKVIAPTQPNSKNNHKIARSPRIHRTYVTRYRTRI-MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDP

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]1.9e-0845.45Show/hide
Query:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMN------------DPPIRQSTEG---TTPKYHPLYNIPVEQHPFPFFK-NEQVP
        M++Q  E EK RKDIEELREK+D IL+ALE+GK + D   SS+ ++            DPP+R   EG       Y+PLY+I V Q+P PF K  +Q+P
Subjt:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMN------------DPPIRQSTEG---TTPKYHPLYNIPVEQHPFPFFK-NEQVP

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]8.7e-0639.8Show/hide
Query:  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDPPIRQSTEGTTPK---------------------YHPLYNIPVEQHPFPFFK
        +++ +E EKTRKDIEELREK+DAIL+ALE+GK    I ++S+ +++PP  Q   G  P                      Y+PLY+IP  Q P P  +
Subjt:  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDPPIRQSTEGTTPK---------------------YHPLYNIPVEQHPFPFFK

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]8.4e-0943.43Show/hide
Query:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPFPFFKN-EQVP
        ME+Q  E EKTRKDIEELREK+D I + LE+GK   D   SS+ +++            PP+R   EG  P+   Y+PLY++P+ Q+P  F K  +Q+P
Subjt:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPFPFFKN-EQVP

TrEMBL top hitse value%identityAlignment
A0A6J1CZG4 uncharacterized protein LOC1110162011.4e-0952.87Show/hide
Query:  RTLSKVIAPTQPNSKNNHKIARSPRIHRTYVTRYRTRI-MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDP
        R LS++        K   KIARS   HRTY TR R R+ ME+Q  E EKTRKDIEELREK+D IL+ALE+GK   D   SS+ +++P
Subjt:  RTLSKVIAPTQPNSKNNHKIARSPRIHRTYVTRYRTRI-MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDP

A0A6J1D7T3 uncharacterized protein LOC1110178129.1e-0945.45Show/hide
Query:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMN------------DPPIRQSTEG---TTPKYHPLYNIPVEQHPFPFFK-NEQVP
        M++Q  E EK RKDIEELREK+D IL+ALE+GK + D   SS+ ++            DPP+R   EG       Y+PLY+I V Q+P PF K  +Q+P
Subjt:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMN------------DPPIRQSTEG---TTPKYHPLYNIPVEQHPFPFFK-NEQVP

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222314.2e-0639.8Show/hide
Query:  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDPPIRQSTEGTTPK---------------------YHPLYNIPVEQHPFPFFK
        +++ +E EKTRKDIEELREK+DAIL+ALE+GK    I ++S+ +++PP  Q   G  P                      Y+PLY+IP  Q P P  +
Subjt:  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDPPIRQSTEGTTPK---------------------YHPLYNIPVEQHPFPFFK

A0A6J1DZ90 Ribonuclease H4.1e-0943.43Show/hide
Query:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPFPFFKN-EQVP
        ME+Q  E EKTRKDIEELREK+D I + LE+GK   D   SS+ +++            PP+R   EG  P+   Y+PLY++P+ Q+P  F K  +Q+P
Subjt:  MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPFPFFKN-EQVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAACTCTCAAGTCAAGGAATGACCAAGTTTTGAAGCAACAATCTGAGATTGCCTCACTTCATGAGTTGATGAA
AGAGCTCGAAGATTGCATTAGTTTGAGGAACCAAACGATTACTGAGGATGCCACTGATAGATTAATGAAAGACTATACCTATTTAAAGGAGCAGTACGACAGATTAAGCG
ATGATTTTGGGTTTGCGAGACAGAACCACGCGACACTACGAAGTAAAGCGGAACATATGCTCACTCAGATTAGGAGAGTCACTCGAAGGGCAGATGAACTAGCAGAAGAT
GCACGTACTCTCTCTAAAGTCATAGCACCTACACAGCCGAATAGCAAGAATAATCATAAGATAGCTCGGTCACCTCGAATCCACCGCACCTACGTCACAAGATACAGGAC
AAGGATCATGGAAGAGCAGAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCCTAGAAAGAGGCAAAATAA
TACCTGATATTGTTCAGTCCAGCCATACAATGAACGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAG
CACCCGTTTCCATTTTTCAAGAATGAGCAAGTGCCTGAAGAAGAAACACCAAAAGAAGATGCTTCAAAAAGCATATTAACACCACTAGACGATGTTTCCAAAAGCATATT
AACAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAACTCTCAAGTCAAGGAATGACCAAGTTTTGAAGCAACAATCTGAGATTGCCTCACTTCATGAGTTGATGAA
AGAGCTCGAAGATTGCATTAGTTTGAGGAACCAAACGATTACTGAGGATGCCACTGATAGATTAATGAAAGACTATACCTATTTAAAGGAGCAGTACGACAGATTAAGCG
ATGATTTTGGGTTTGCGAGACAGAACCACGCGACACTACGAAGTAAAGCGGAACATATGCTCACTCAGATTAGGAGAGTCACTCGAAGGGCAGATGAACTAGCAGAAGAT
GCACGTACTCTCTCTAAAGTCATAGCACCTACACAGCCGAATAGCAAGAATAATCATAAGATAGCTCGGTCACCTCGAATCCACCGCACCTACGTCACAAGATACAGGAC
AAGGATCATGGAAGAGCAGAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCCTAGAAAGAGGCAAAATAA
TACCTGATATTGTTCAGTCCAGCCATACAATGAACGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAG
CACCCGTTTCCATTTTTCAAGAATGAGCAAGTGCCTGAAGAAGAAACACCAAAAGAAGATGCTTCAAAAAGCATATTAACACCACTAGACGATGTTTCCAAAAGCATATT
AACAGCATGA
Protein sequenceShow/hide protein sequence
MHRLRRDNEVSQATLKSRNDQVLKQQSEIASLHELMKELEDCISLRNQTITEDATDRLMKDYTYLKEQYDRLSDDFGFARQNHATLRSKAEHMLTQIRRVTRRADELAED
ARTLSKVIAPTQPNSKNNHKIARSPRIHRTYVTRYRTRIMEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIVQSSHTMNDPPIRQSTEGTTPKYHPLYNIPVEQ
HPFPFFKNEQVPEEETPKEDASKSILTPLDDVSKSILTA