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Lag0000333 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000333
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:4325482..4330178
RNA-Seq ExpressionLag0000333
SyntenyLag0000333
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040577.1 uncharacterized protein E6C27_scaffold262G001470 [Cucumis melo var. makuwa]6.1e-1357.65Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTGIVRG    L    L TK+ GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.1e-1357.83Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW         VE++ YF N+VMSGLHL+FNVS GST IVRG            K AGGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-1155.42Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW+ELY          YF N+VMS LHL+F+V  GSTGIVRG            K  GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

TYK05620.1 uncharacterized protein E5676_scaffold98G00770 [Cucumis melo var. makuwa]6.1e-1357.65Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTGIVRG    L    L TK+ GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]1.1e-1156.63Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW+ELY           F N+VMS LHL+FNVS GSTGIVRG            K  GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

TrEMBL top hitse value%identityAlignment
A0A5A7TG84 Uncharacterized protein2.9e-1357.65Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTGIVRG    L    L TK+ GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.9e-1357.83Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW         VE++ YF N+VMSGLHL+FNVS GST IVRG            K AGGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

A0A5A7V9N3 Reverse transcriptase5.5e-1255.42Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW+ELY          YF N+VMS LHL+F+V  GSTGIVRG            K  GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

A0A5D3C2P9 Uncharacterized protein2.9e-1357.65Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTGIVRG    L    L TK+ GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

A0A5D3CJX3 CCHC-type domain-containing protein5.5e-1256.63Show/hide
Query:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG
        ELP+ DTLPTSA+SS S+SSTW+ELY           F N+VMS LHL+FNVS GSTGIVRG            K  GGPGGG
Subjt:  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGG

SwissProt top hitse value%identityAlignment
Q69SV0 Probable L-ascorbate peroxidase 8, chloroplastic9.1e-0442.86Show/hide
Query:  RCGVSSEMLRVGPWHLKSEREDIKELLKTTFCHPNLENISWN
        RC  ++ +       LKS REDI+E+LKTT+CHP +  + W+
Subjt:  RCGVSSEMLRVGPWHLKSEREDIKELLKTTFCHPNLENISWN

Arabidopsis top hitse value%identityAlignment
AT4G08390.1 stromal ascorbate peroxidase3.2e-0460Show/hide
Query:  PWHLKSEREDIKELLKTTFCHPNLENISWN
        P  LK+ REDIKELL T FCHP L  + W+
Subjt:  PWHLKSEREDIKELLKTTFCHPNLENISWN

AT4G08390.2 stromal ascorbate peroxidase3.2e-0460Show/hide
Query:  PWHLKSEREDIKELLKTTFCHPNLENISWN
        P  LK+ REDIKELL T FCHP L  + W+
Subjt:  PWHLKSEREDIKELLKTTFCHPNLENISWN

AT4G08390.3 stromal ascorbate peroxidase3.2e-0460Show/hide
Query:  PWHLKSEREDIKELLKTTFCHPNLENISWN
        P  LK+ REDIKELL T FCHP L  + W+
Subjt:  PWHLKSEREDIKELLKTTFCHPNLENISWN

AT4G08390.4 stromal ascorbate peroxidase3.2e-0460Show/hide
Query:  PWHLKSEREDIKELLKTTFCHPNLENISWN
        P  LK+ REDIKELL T FCHP L  + W+
Subjt:  PWHLKSEREDIKELLKTTFCHPNLENISWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCCCACTTTTCATGTAGAGATCGAGAGCTCCCGATGCTTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACAG
TTATTTTCCAAACCGAGTTATGTCAGGACTGCACCTCATATTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTT
TGACTAAGCTAGCAGGTGGTCCGGGAGGGGGGGAACAATCATGTGCCTGCAACAAAAGGGAACTGAGCACTGGTGTGGTGCTAAGCCACACACACTTTGATGCCCAAATC
CCTTTAATTGACCATTACGAGTCTACAACCGTCGTTGGACTTGTTTTCACTGGATTTAGAGAAGGTCGATGCGGTGTCTCATCCGAAATGCTTAGAGTCGGACCCTGGCA
TTTGAAGAGTGAGAGAGAAGATATCAAGGAGCTCCTAAAGACTACATTCTGCCATCCTAATTTGGAGAATATATCTTGGAACCTAGGCCAAAAGGTTTTGTACTATTCTA
AACTGGAGTTTTCAGTTGTTCCTTTTACACCCAATGAGGATGATTTCACTGCAAGTTACTTCCAACAGTTTGTCAATGATCCAGTGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCCCACTTTTCATGTAGAGATCGAGAGCTCCCGATGCTTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACAG
TTATTTTCCAAACCGAGTTATGTCAGGACTGCACCTCATATTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTT
TGACTAAGCTAGCAGGTGGTCCGGGAGGGGGGGAACAATCATGTGCCTGCAACAAAAGGGAACTGAGCACTGGTGTGGTGCTAAGCCACACACACTTTGATGCCCAAATC
CCTTTAATTGACCATTACGAGTCTACAACCGTCGTTGGACTTGTTTTCACTGGATTTAGAGAAGGTCGATGCGGTGTCTCATCCGAAATGCTTAGAGTCGGACCCTGGCA
TTTGAAGAGTGAGAGAGAAGATATCAAGGAGCTCCTAAAGACTACATTCTGCCATCCTAATTTGGAGAATATATCTTGGAACCTAGGCCAAAAGGTTTTGTACTATTCTA
AACTGGAGTTTTCAGTTGTTCCTTTTACACCCAATGAGGATGATTTCACTGCAAGTTACTTCCAACAGTTTGTCAATGATCCAGTGCAATAA
Protein sequenceShow/hide protein sequence
MFSHFSCRDRELPMLDTLPTSAKSSRSSSSTWVELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGGEQSCACNKRELSTGVVLSHTHFDAQI
PLIDHYESTTVVGLVFTGFREGRCGVSSEMLRVGPWHLKSEREDIKELLKTTFCHPNLENISWNLGQKVLYYSKLEFSVVPFTPNEDDFTASYFQQFVNDPVQ