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Lag0000335 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000335
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol protein
Genome locationchr4:4415857..4416168
RNA-Seq ExpressionLag0000335
SyntenyLag0000335
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025917.1 pol protein [Cucumis melo var. makuwa]5.1e-3474.51Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVH+VFHVSMLRRY+ +P H VDFEPLQ+SENLSYEE+P+ IL RE+K LR+R+I LVKVLWQNH  EEATWERE+ M T++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
KAA0031854.1 pol protein [Cucumis melo var. makuwa]5.1e-3470.59Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVHNVFHVSMLR+Y+ +P+H VD+EPL++ ENLSY E+P+ +L REVK+LRNREI LVK+LW+NH  EEATWERED M  ++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
KAA0042023.1 pol protein [Cucumis melo var. makuwa]5.1e-3472.55Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVH+VFHVSMLR Y+ +P+H VD+EPL++ ENLSY E+P+ +L REVK+LRNREI LVKVLWQNH  EEATWERED M  ++PEF
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
TYK09567.1 pol protein [Cucumis melo var. makuwa]6.7e-3474.51Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLA+PPS SAVH+VFHVSMLRRY+ +P H VDFEPLQ+SENLSYEE+P  IL REVK LRNREI+LVKVLW+NH  EEATWERE+ M T++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
XP_038896625.1 uncharacterized protein LOC120084887 [Benincasa hispida]2.3e-3474.51Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVHNVFHVSMLR+YL +P H VDFEPLQL++NLSYEEKP+ ++ REVKVLR++E+ALVKVLWQNH  EEATWERED+M     E 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
TrEMBL top hitse value%identityAlignment
A0A5A7SL05 Pol protein2.5e-3470.59Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVHNVFHVSMLR+Y+ +P+H VD+EPL++ ENLSY E+P+ +L REVK+LRNREI LVK+LW+NH  EEATWERED M  ++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
A0A5A7TFN7 Pol protein2.5e-3472.55Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVH+VFHVSMLR Y+ +P+H VD+EPL++ ENLSY E+P+ +L REVK+LRNREI LVKVLWQNH  EEATWERED M  ++PEF
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
A0A5A7TP01 Reverse transcriptase2.5e-3474.51Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPSLSAVH+VFHVSMLRRY+ +P H VDFEPLQ+SENLSYEE+P+ IL RE+K LR+R+I LVKVLWQNH  EEATWERE+ M T++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
A0A5A7UB12 Reverse transcriptase7.2e-3472.55Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLALPPS SAVH+VFHVSMLRRY+ +P H VDFEPLQ+SENLSYEE+P+ +L REVK LR+REI+LVK+LWQNH  EEATWERE+ M  ++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
A0A5D3CC41 Pol protein3.2e-3474.51Show/hide
Query:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF
        IG VAYRLA+PPS SAVH+VFHVSMLRRY+ +P H VDFEPLQ+SENLSYEE+P  IL REVK LRNREI+LVKVLW+NH  EEATWERE+ M T++PE 
Subjt:  IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEF

Query:  FK
        F+
Subjt:  FK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGGTCTGGTAGCTTATCGTCTAGCGTTGCCTCCTTCTCTTTCGGCGGTACACAATGTTTTCCATGTCTCCATGCTACGAAGGTATTTGGAAAATCCAGCCCATAGAGT
GGACTTCGAACCTTTGCAACTGAGCGAGAACTTGTCATATGAGGAGAAGCCTATGCTAATTCTTGATAGAGAGGTGAAGGTCCTTCGTAATCGCGAGATAGCTCTCGTAA
AGGTCCTTTGGCAAAACCATCTGTCTGAAGAAGCAACATGGGAGAGAGAAGACAAAATGATGACCAAGTTTCCAGAGTTTTTCAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATTGGTCTGGTAGCTTATCGTCTAGCGTTGCCTCCTTCTCTTTCGGCGGTACACAATGTTTTCCATGTCTCCATGCTACGAAGGTATTTGGAAAATCCAGCCCATAGAGT
GGACTTCGAACCTTTGCAACTGAGCGAGAACTTGTCATATGAGGAGAAGCCTATGCTAATTCTTGATAGAGAGGTGAAGGTCCTTCGTAATCGCGAGATAGCTCTCGTAA
AGGTCCTTTGGCAAAACCATCTGTCTGAAGAAGCAACATGGGAGAGAGAAGACAAAATGATGACCAAGTTTCCAGAGTTTTTCAAGTACTAG
Protein sequenceShow/hide protein sequence
IGLVAYRLALPPSLSAVHNVFHVSMLRRYLENPAHRVDFEPLQLSENLSYEEKPMLILDREVKVLRNREIALVKVLWQNHLSEEATWEREDKMMTKFPEFFKY