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Lag0000339 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000339
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:4556545..4556892
RNA-Seq ExpressionLag0000339
SyntenyLag0000339
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]4.9e-2556.12Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E+V P G +E PVTFG G ++VT+M++ LVV+   +YNAILGRPT+H L+ + STYHQ +KF T  GVG + GEQ++SRECY+ ++++ DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.0e-2351.02Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PL+GFG E++ P+G +ELP+TF    +++TRM++FLVVD   +YN IL RPT+H L+ + STYHQ +KF T  GVG + GEQ++SRECY+ +++  D+
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.1e-2456.12Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E V P G +ELPVTFG G +++T+M++FLVVD   + NAILGRPT+H LK + S YHQ +KF T  G+G + GEQ++SRECY+ ++K  D+
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]8.3e-2558.16Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E+V   G +ELPVTFG G ++VT+M++FLVV+   +YNAILGRPT+H LK + STYHQ  KF T  GVG + GEQ++SRECY  ++++ DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]7.5e-2658.16Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PL+GFGRE+V P G +EL VTFG G ++VT+M++FLVVD   +YNAILGR T+H LK + STYHQ +KF T  GVG + GEQ++SRECY+ +++  DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141472.4e-2556.12Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E+V P G +E PVTFG G ++VT+M++ LVV+   +YNAILGRPT+H L+ + STYHQ +KF T  GVG + GEQ++SRECY+ ++++ DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
A0A6J1CZ14 uncharacterized protein LOC1110159019.9e-2451.02Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PL+GFG E++ P+G +ELP+TF    +++TRM++FLVVD   +YN IL RPT+H L+ + STYHQ +KF T  GVG + GEQ++SRECY+ +++  D+
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
A0A6J1DAK4 uncharacterized protein LOC1110189025.2e-2556.12Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E V P G +ELPVTFG G +++T+M++FLVVD   + NAILGRPT+H LK + S YHQ +KF T  G+G + GEQ++SRECY+ ++K  D+
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
A0A6J1DQY2 uncharacterized protein LOC1110223214.0e-2558.16Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PLVGFG E+V   G +ELPVTFG G ++VT+M++FLVV+   +YNAILGRPT+H LK + STYHQ  KF T  GVG + GEQ++SRECY  ++++ DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
A0A6J1DXV4 uncharacterized protein LOC1110251473.6e-2658.16Show/hide
Query:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
        PL+GFGRE+V P G +EL VTFG G ++VT+M++FLVVD   +YNAILGR T+H LK + STYHQ +KF T  GVG + GEQ++SRECY+ +++  DR
Subjt:  PLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTGGTGGGGTTTGGCAGAGAAAAAGTAAGCCCGAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACGAGAATGATCAACTTTCT
AGTGGTAGATTGCGTCCCAGCATATAATGCCATCTTGGGGCGACCCACCCTACATGGACTTAAAGTTGTAGCCTCAACCTACCACCAAGTCTTGAAATTCTCGACCGAAG
AAGGTGTAGGAGCAGTGTATGGCGAGCAAAAGATGTCGAGGGAATGTTACTTTATGACACTCAAGAACATTGACAGAAAGGTTCAAGCAACGTTAGCCTCGGGAGATGGC
CGAGGTCGAGCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTGGTGGGGTTTGGCAGAGAAAAAGTAAGCCCGAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACGAGAATGATCAACTTTCT
AGTGGTAGATTGCGTCCCAGCATATAATGCCATCTTGGGGCGACCCACCCTACATGGACTTAAAGTTGTAGCCTCAACCTACCACCAAGTCTTGAAATTCTCGACCGAAG
AAGGTGTAGGAGCAGTGTATGGCGAGCAAAAGATGTCGAGGGAATGTTACTTTATGACACTCAAGAACATTGACAGAAAGGTTCAAGCAACGTTAGCCTCGGGAGATGGC
CGAGGTCGAGCATTTTAG
Protein sequenceShow/hide protein sequence
MPLVGFGREKVSPRGSVELPVTFGEGLQTVTRMINFLVVDCVPAYNAILGRPTLHGLKVVASTYHQVLKFSTEEGVGAVYGEQKMSRECYFMTLKNIDRKVQATLASGDG
RGRAF