; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000340 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000340
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:4612831..4615917
RNA-Seq ExpressionLag0000340
SyntenyLag0000340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.7e-0933.33Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLQDFVTNIITQYKWQEFCAHPQEVVVPLVREFYAGLREESMSMAVVRGKMASFSSVDINRVYRIKAPLHPRGNDAIKN
        ++ R    EKGF    S   G L  F+  +ITQ+ W++FCAHP++ +VPLVREFYA L +   +   VRG   S+S   IN V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRAGTLQDFVTNIITQYKWQEFCAHPQEVVVPLVREFYAGLREESMSMAVVRGKMASFSSVDINRVYRIKAPLHPRGNDAIKN

Query:  PSAKQMKEALKLVANKGSNGRNPKQ------RVKIVPGKDEERHFFK
         + + +   L+ VA  G+      Q      R  + P      HF K
Subjt:  PSAKQMKEALKLVANKGSNGRNPKQ------RVKIVPGKDEERHFFK

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]3.8e-0424.42Show/hide
Query:  KDEEKIEIEEAE------------TSSDLEEKKRRRELRAERRTKNKNDPIFANRLRTRSMDASSAAPPTSTPVKLTAKSPKAPKNLFPQVFRDVHFQEK
        K+ +K E++ AE              ++ E+KK++ + + +R+ + K     A   + R  D + ++ P S       +S K  +N              
Subjt:  KDEEKIEIEEAE------------TSSDLEEKKRRRELRAERRTKNKNDPIFANRLRTRSMDASSAAPPTSTPVKLTAKSPKAPKNLFPQVFRDVHFQEK

Query:  MEVMRKRDFLNEKGFSNRAGTLQDFVTNIITQYKWQEFCAHPQEVVVPLVREFYAGLREESMSMAVVRGKMASFSSVDINRVYRIKAPLHPRGNDAIKNP
               D L E GF      L D +T+II ++ W  F   P  +V  +V +FY G   E+      +G+   FS+ +IN +Y+++      GN  I +P
Subjt:  MEVMRKRDFLNEKGFSNRAGTLQDFVTNIITQYKWQEFCAHPQEVVVPLVREFYAGLREESMSMAVVRGKMASFSSVDINRVYRIKAPLHPRGNDAIKNP

Query:  SAKQMKEALKLVANKGS
        + + M+ ALK++A  G+
Subjt:  SAKQMKEALKLVANKGS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTGCCCTTTCTATGGCACGAGAGCGACTTCTATTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAACACTAGGACTTAAGGATAAAGAGGGGAGTTA
CACGTTCAGAGGGTTTCAAGGAGGGAGTTGCTTATCTTCCGTTAGATCTCCTTCTCCCTCATTCGAACGTTGGTGTGCATCTGACGAATCCCCATTCTCTCTCATTCTCT
CGTGTATTCCAGAGAAAGATCACAGAGAACAAAAATTCTTCAATTCCCTTAGTGAGCAATTGCTCCCACAAGCAACCTCAAGCAAGAATCCAGTGAGAATACTGGTGCGA
GCGATTGGTGGTGTTCATGCAAAATTCCAGCAAGGCTTTTATCCCTTGAAAAGGGACTTGGAAGAAGAAATGGAAGCTGAAAGAAAGAAGGAAGAAGAAAAAGAAGAGGC
AGAGAGGGCCATCGAAGCTGAAAAAGAAAGAAAACAAGATGAAGAACTCAGGAGAGCTCAAAGTGAGGAGGAACAGCTGCAGGAAGTCGAAGAAGAGGCCCTTGAAGAAA
AATCTGAAAAAGAAAAAGAGAAAGAAAATGAAGGCCAGAATGTGAACGCATTTGGGCCGCATTCTGAAGAAAGCAAAGAAAAGGCCACCGAAGGAGAGCAAGTTGATGAG
GCCTTGGATCCTCTGTTTGAATATGATGTTAGACGACCTTCACCAGCTGCTGACAGTACCTTTCCGGGAGAGAAAAAAGATGAAGAGAAAATTGAAATTGAAGAGGCTGA
GACCTCCAGTGATTTAGAAGAGAAGAAGAGAAGAAGAGAATTGAGGGCCGAAAGAAGGACCAAGAACAAAAATGACCCCATATTTGCTAACAGGTTGAGGACAAGGTCCA
TGGACGCCTCTTCTGCAGCTCCTCCTACCTCCACACCTGTCAAACTGACAGCCAAATCACCTAAAGCTCCAAAGAACCTGTTTCCTCAAGTCTTCAGAGATGTCCATTTC
CAGGAGAAAATGGAGGTTATGAGAAAACGAGACTTCTTGAACGAGAAGGGATTCTCCAACAGAGCAGGAACCTTGCAAGACTTCGTGACCAACATCATTACCCAGTATAA
GTGGCAGGAGTTCTGTGCTCACCCTCAAGAGGTCGTGGTGCCTTTAGTTCGAGAATTTTATGCTGGTCTGAGGGAAGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAAA
TGGCCAGTTTCTCTTCAGTTGACATCAACAGGGTGTACAGGATCAAAGCACCCTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCAGCCAAGCAGATGAAAGAA
GCATTGAAACTAGTGGCCAATAAGGGTTCCAATGGAAGGAATCCCAAACAAAGGGTGAAGATAGTTCCTGGGAAAGATGAGGAACGCCACTTTTTCAAGCTAACCACTGA
TCTACCTCTGATTTGGAAGCTACAACAGAATAATGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACTCCACCACCGGGGTTGACACCTGCTTCACTTCCTCAAC
ATACTCCAGTTTCAAGGCCCACACCATCATCAGAGACCCTTGCATTTACCTTCCGACAGCTAGACTGGATTCAAGACAAGCTTAAGGCTTACTGGGTCTATGCCAAGGAG
AGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCTCGAGCATCGACCCCGTGTTTCCTGACTTCCCTCAATCACTACTGCCTCAAGAAGAGAAAGAATCTGATGA
AGAAGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGAATGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTGCCCTTTCTATGGCACGAGAGCGACTTCTATTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAACACTAGGACTTAAGGATAAAGAGGGGAGTTA
CACGTTCAGAGGGTTTCAAGGAGGGAGTTGCTTATCTTCCGTTAGATCTCCTTCTCCCTCATTCGAACGTTGGTGTGCATCTGACGAATCCCCATTCTCTCTCATTCTCT
CGTGTATTCCAGAGAAAGATCACAGAGAACAAAAATTCTTCAATTCCCTTAGTGAGCAATTGCTCCCACAAGCAACCTCAAGCAAGAATCCAGTGAGAATACTGGTGCGA
GCGATTGGTGGTGTTCATGCAAAATTCCAGCAAGGCTTTTATCCCTTGAAAAGGGACTTGGAAGAAGAAATGGAAGCTGAAAGAAAGAAGGAAGAAGAAAAAGAAGAGGC
AGAGAGGGCCATCGAAGCTGAAAAAGAAAGAAAACAAGATGAAGAACTCAGGAGAGCTCAAAGTGAGGAGGAACAGCTGCAGGAAGTCGAAGAAGAGGCCCTTGAAGAAA
AATCTGAAAAAGAAAAAGAGAAAGAAAATGAAGGCCAGAATGTGAACGCATTTGGGCCGCATTCTGAAGAAAGCAAAGAAAAGGCCACCGAAGGAGAGCAAGTTGATGAG
GCCTTGGATCCTCTGTTTGAATATGATGTTAGACGACCTTCACCAGCTGCTGACAGTACCTTTCCGGGAGAGAAAAAAGATGAAGAGAAAATTGAAATTGAAGAGGCTGA
GACCTCCAGTGATTTAGAAGAGAAGAAGAGAAGAAGAGAATTGAGGGCCGAAAGAAGGACCAAGAACAAAAATGACCCCATATTTGCTAACAGGTTGAGGACAAGGTCCA
TGGACGCCTCTTCTGCAGCTCCTCCTACCTCCACACCTGTCAAACTGACAGCCAAATCACCTAAAGCTCCAAAGAACCTGTTTCCTCAAGTCTTCAGAGATGTCCATTTC
CAGGAGAAAATGGAGGTTATGAGAAAACGAGACTTCTTGAACGAGAAGGGATTCTCCAACAGAGCAGGAACCTTGCAAGACTTCGTGACCAACATCATTACCCAGTATAA
GTGGCAGGAGTTCTGTGCTCACCCTCAAGAGGTCGTGGTGCCTTTAGTTCGAGAATTTTATGCTGGTCTGAGGGAAGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAAA
TGGCCAGTTTCTCTTCAGTTGACATCAACAGGGTGTACAGGATCAAAGCACCCTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCAGCCAAGCAGATGAAAGAA
GCATTGAAACTAGTGGCCAATAAGGGTTCCAATGGAAGGAATCCCAAACAAAGGGTGAAGATAGTTCCTGGGAAAGATGAGGAACGCCACTTTTTCAAGCTAACCACTGA
TCTACCTCTGATTTGGAAGCTACAACAGAATAATGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACTCCACCACCGGGGTTGACACCTGCTTCACTTCCTCAAC
ATACTCCAGTTTCAAGGCCCACACCATCATCAGAGACCCTTGCATTTACCTTCCGACAGCTAGACTGGATTCAAGACAAGCTTAAGGCTTACTGGGTCTATGCCAAGGAG
AGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCTCGAGCATCGACCCCGTGTTTCCTGACTTCCCTCAATCACTACTGCCTCAAGAAGAGAAAGAATCTGATGA
AGAAGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGAATGAGGAATAG
Protein sequenceShow/hide protein sequence
MGPALSMARERLLFVGWTSNRLFIRGTLGLKDKEGSYTFRGFQGGSCLSSVRSPSPSFERWCASDESPFSLILSCIPEKDHREQKFFNSLSEQLLPQATSSKNPVRILVR
AIGGVHAKFQQGFYPLKRDLEEEMEAERKKEEEKEEAERAIEAEKERKQDEELRRAQSEEEQLQEVEEEALEEKSEKEKEKENEGQNVNAFGPHSEESKEKATEGEQVDE
ALDPLFEYDVRRPSPAADSTFPGEKKDEEKIEIEEAETSSDLEEKKRRRELRAERRTKNKNDPIFANRLRTRSMDASSAAPPTSTPVKLTAKSPKAPKNLFPQVFRDVHF
QEKMEVMRKRDFLNEKGFSNRAGTLQDFVTNIITQYKWQEFCAHPQEVVVPLVREFYAGLREESMSMAVVRGKMASFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQMKE
ALKLVANKGSNGRNPKQRVKIVPGKDEERHFFKLTTDLPLIWKLQQNNAQRKDKASTSQATPPPGLTPASLPQHTPVSRPTPSSETLAFTFRQLDWIQDKLKAYWVYAKE
RDEAIREFYLSIASSIDPVFPDFPQSLLPQEEKESDEEDEDEEDERESSSNEE