| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.0e-132 | 46.37 | Show/hide |
Query: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
++E + W QR KK WL+EGDEN++FFH+ T S+ + NL+W PI E L PF
Subjt: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
Query: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
E E+ + ++ K+PGPDGF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISLTT +Y++IAKTL+ RLK+ L
Subjt: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
Query: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
TIS NQLAFVK RQITDAIL+ANEA+DFWK + +GF++KLDIEKAFD + W+F+D +L K +P W P+ +IKA RG
Subjt: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
Query: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
+RQGDP+SPF+FV+AMDYLSR+L E G +KG SLNS ++SH+LFADDILLF++DND L NL + +FE +SGL IN KS++ +NV +R +
Subjt: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
Query: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
A+ WG P+ YLG PLGGNP S+ FW N DKI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+ P C +I+K R FLW G++ S
Subjt: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
Query: SIPLVSWDKVAAPIEAGVWAYSRL
L++W KV+ E G SRL
Subjt: SIPLVSWDKVAAPIEAGVWAYSRL
|
|
| KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.6e-135 | 48.09 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NLNW PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ SR QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ + E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| KAA0041367.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.3e-135 | 47.71 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NL+W PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG + +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ +R QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG ++ +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ +P E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.7e-134 | 45.99 | Show/hide |
Query: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
++E + W QR KK WL+EGDEN++FFH+ T S+ + + NL W PI E +L PF
Subjt: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
Query: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
E E+ + ++ K+PGPDGF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISLTT +Y++IAKTL+ RLK++L
Subjt: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
Query: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
TISENQLAFVK RQITDAIL+ANEA+DFWK + +GF++KLDIEKAFD + W+F+D +L K +PI W P+ +IKA RG
Subjt: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
Query: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
+RQGDP+SPF+FV+AMDYLSR+L E G +KG S +S ++SH+LFADDILLF++DND L NL + +FE +SGL IN KS++ +NV + R +
Subjt: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
Query: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
A+ WG + P+ YLG PLGGNP S FW+N +KI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+AP C +I+K R+FLW G++ S
Subjt: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
Query: SIPLVSWDKVAAPIEAGVWAYSRL
L++W KV G SR+
Subjt: SIPLVSWDKVAAPIEAGVWAYSRL
|
|
| XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | 7.4e-135 | 47.9 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NLNW PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ SR QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFK P S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ + E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein | 3.6e-135 | 47.9 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NLNW PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ SR QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFK P S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ + E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| A0A5A7TI93 LINE-1 retrotransposable element ORF2 protein | 1.6e-135 | 47.71 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NL+W PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG + +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ +R QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG ++ +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ +P E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 1.8e-134 | 45.99 | Show/hide |
Query: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
++E + W QR KK WL+EGDEN++FFH+ T S+ + + NL W PI E +L PF
Subjt: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
Query: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
E E+ + ++ K+PGPDGF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISLTT +Y++IAKTL+ RLK++L
Subjt: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
Query: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
TISENQLAFVK RQITDAIL+ANEA+DFWK + +GF++KLDIEKAFD + W+F+D +L K +PI W P+ +IKA RG
Subjt: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
Query: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
+RQGDP+SPF+FV+AMDYLSR+L E G +KG S +S ++SH+LFADDILLF++DND L NL + +FE +SGL IN KS++ +NV + R +
Subjt: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
Query: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
A+ WG + P+ YLG PLGGNP S FW+N +KI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+AP C +I+K R+FLW G++ S
Subjt: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
Query: SIPLVSWDKVAAPIEAGVWAYSRL
L++W KV G SR+
Subjt: SIPLVSWDKVAAPIEAGVWAYSRL
|
|
| A0A5D3BUZ3 LINE-1 retrotransposable element ORF2 protein | 9.8e-133 | 46.37 | Show/hide |
Query: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
++E + W QR KK WL+EGDEN++FFH+ T S+ + NL+W PI E L PF
Subjt: MQEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFS
Query: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
E E+ + ++ K+PGPDGF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISLTT +Y++IAKTL+ RLK+ L
Subjt: ELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTL
Query: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
TIS NQLAFVK RQITDAIL+ANEA+DFWK + +GF++KLDIEKAFD + W+F+D +L K +P W P+ +IKA RG
Subjt: QGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG
Query: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
+RQGDP+SPF+FV+AMDYLSR+L E G +KG SLNS ++SH+LFADDILLF++DND L NL + +FE +SGL IN KS++ +NV +R +
Subjt: IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQ
Query: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
A+ WG P+ YLG PLGGNP S+ FW N DKI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+ P C +I+K R FLW G++ S
Subjt: IAANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSS
Query: SIPLVSWDKVAAPIEAGVWAYSRL
L++W KV+ E G SRL
Subjt: SIPLVSWDKVAAPIEAGVWAYSRL
|
|
| A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein | 1.2e-135 | 48.09 | Show/hide |
Query: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
+E ++W Q+ K+ W+ EGDENT+FFHK G W++ NLNW PIS +A +L F+E
Subjt: QEIRMWKQRCKKTWLKEGDENTTFFHK------------------------------------------GTTSEGWMVSNLNWCPISGPEATSLIQPFSE
Query: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
E+ + L A +NKSPGPDGFT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLTT +Y+LIAK +AERLK TL
Subjt: LEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQ
Query: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVIKLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Subjt: GTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI
Query: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++ + NL NII +F+L+SGL+IN +KS+I+ INV+ SR QI
Subjt: RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQI
Query: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
A+ WG T PI YLG PLGG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C +I+K R+FLW ++
Subjt: AANWGCPTTQFPIPYLGSPLGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHGHDQSSS
Query: IPLVSWDKVAAPIEAGVWAYSRLE
+ LV+W K+ + E G SRL+
Subjt: IPLVSWDKVAAPIEAGVWAYSRLE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 2.5e-32 | 26.41 | Show/hide |
Query: EATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIA
E SL +P + E+ + ++ KSPGPDGFT EF+++ + P ++++F+ ++GI+ + E I LIPK + + ++FRPISL + +++
Subjt: EATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIA
Query: KTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV-IKLDIEKAFDKICWNFVDKILAFKGYPITWPK----------------
K LA R++ ++ I +Q+ F+ G Q I + I ++ + V I +D EKAFDKI F+ K L G + K
Subjt: KTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV-IKLDIEKAFDKICWNFVDKILAFKGYPITWPK----------------
Query: -RKIKA---ERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSIT
+K++A + G RQG P+SP +F + ++ L+R ++ ++ +KG L V LFADD+++++++ NL +I F SG IN KS
Subjt: -RKIKA---ERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSIT
Query: GINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSI--FKAPQSVCFSID
N +QI I YLG L + + + +I + W+ S GR+ +++ + Y + K P + ++
Subjt: GINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSI--FKAPQSVCFSID
Query: KIIRSFLWH
K F+W+
Subjt: KIIRSFLWH
|
|
| P08548 LINE-1 reverse transcriptase homolog | 1.2e-31 | 26.51 | Show/hide |
Query: ISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLY
+S E L +P S E+ ++ + KSPGPDGFT EF++ + P ++ +F++ ++GI+ E ITLIPK K + +++RPISL +
Subjt: ISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLY
Query: RLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAID-FWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITWPK------------
+++ K L R++ ++ I +Q+ F+ G Q I + I K ++ +D EKAFD I F+ + L G T+ K
Subjt: RLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAID-FWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYPITWPK------------
Query: --------RKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSK
+ G RQG P+SP +F + M+ L+ ++ E+K +KG + S + LFADD+++++++ L +IK + SG IN K
Subjt: --------RKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSK
Query: SSITGINVEDSRVAQIAANWGCPTTQFP--IPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQS
S ++ A+ P T P + YLG L + + +I ++ W+ S GR+ +++ ++ I N+ KAP S
Subjt: SSITGINVEDSRVAQIAANWGCPTTQFP--IPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQS
Query: VCFSIDKIIRSFLWH
++KII F+W+
Subjt: VCFSIDKIIRSFLWH
|
|
| P11369 LINE-1 retrotransposable element ORF2 protein | 2.6e-29 | 25.77 | Show/hide |
Query: IRMWKQRCKKTWLKEGDENTTFFHKGTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDF
IR + +R T L+ DE F + + V LN + L P S E+ + ++ KSPGPDGF+ EF++ + P + ++F
Subjt: IRMWKQRCKKTWLKEGDENTTFFHKGTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDF
Query: FQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFW-KCSRTRGFVIKL
+G + + E ITLIPK K +I++FRPISL + +++ K LA R++ ++ I +Q+ F+ G Q I + I + K +I L
Subjt: FQKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFW-KCSRTRGFVIKL
Query: DIEKAFDKICWNFVDKILAFKG------------YPITWPKRKIKAER--------GIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVS
D EKAFDKI F+ K+L G Y K+ E+ G RQG P+SP++F + ++ L+R ++ ++ +KG + V
Subjt: DIEKAFDKICWNFVDKILAFKG------------YPITWPKRKIKAER--------GIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVS
Query: HLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKL
L ADD+++++ D L N+I F G IN +KS +I I YLG L + + +I L
Subjt: HLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKL
Query: DSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWH
W+ S GR+ +++ + I + K P ++ I F+W+
Subjt: DSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWH
|
|
| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.1e-29 | 28.78 | Show/hide |
Query: PFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLK
P + E+ Q L+ M HNKSPG DG T+EFF+ W + P V + F+KG + + ++L+PKK I+++RP+SL + Y+++AK ++ RLK
Subjt: PFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLK
Query: STLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKIL-------AFKGY------------PITWP-KRKIKA
S L I +Q V GR I D + + + + F + + + LD EKAFD++ ++ L F GY I W +
Subjt: STLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKIL-------AFKGY------------PITWP-KRKIKA
Query: ERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSS--ITG-INVED
RG+RQG P+S ++ LA++ +L+ ++K + V + +ADD++L QD L +V+ +S IN+SKSS + G + V+
Subjt: ERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSS--ITG-INVED
Query: SRVAQIAANWGCPTTQFPIPYLGSPLGGN--PSSSSFWANTVDKIHRKLDSWR--YSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSF
A +W I YLG L P S +F + + +L W+ +S GR +I ++ Y L Q I + + F
Subjt: SRVAQIAANWGCPTTQFPIPYLGSPLGGN--PSSSSFWANTVDKIHRKLDSWR--YSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSF
Query: LWHG-HDQS---SSIPL
LW G H S SS+PL
Subjt: LWHG-HDQS---SSIPL
|
|
| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 1.5e-16 | 28 | Show/hide |
Query: SPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETY----ITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAF
+PG DG TV+ ++ + R+F Q ++ +V + TLIPK ++RPI++ + L RL+ + LA+RL++ ++ ++ A
Subjt: SPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETY----ITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAF
Query: VKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYP------ITW---------------PKRKIKAERGIRQGDPISPF
+ G + +L + I + R V+ LD+ KAFD + + + + L G IT RKI RG++QGDP+SPF
Subjt: VKGRQITDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYP------ITW---------------PKRKIKAERGIRQGDPISPF
Query: IFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKS
+F +D L LQS G+ G ++ + L FADD+LL ++DND +L + F G+++N KS
Subjt: IFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G43760.1 DNAse I-like superfamily protein | 3.3e-16 | 30.11 | Show/hide |
Query: WKQRCKKTWLKEGDENTTFFHKGTTS-------------EGWMVSNLN---------WCPISGPEATSL----------IQPF--------------SEL
++Q+ + WL++GD NT FFHK + + V N+ + + G ++ L I PF S+
Subjt: WKQRCKKTWLKEGDENTTFFHKGTTS-------------EGWMVSNLN---------WCPISGPEATSL----------IQPF--------------SEL
Query: EVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLI
E+ + AM NK+PGPD FT EFF +SW ++ S + ++FF+ G + N T ITLIPK Q+ FRP+S TV+Y++I
Subjt: EVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTTVLYRLI
|
|
| AT4G20520.1 RNA binding;RNA-directed DNA polymerases | 6.7e-09 | 32.32 | Show/hide |
Query: LAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRG----FVIKLDIEKAFDKICWNFVDKILAFKGYPITWPKRKIKAERGIRQGDP
+ ERLK + I Q +F+ GR TD I+ EA+ + R +G ++KLD+EKA+D+I W++++ L G+P W ++ G R+ P
Subjt: LAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRG----FVIKLDIEKAFDKICWNFVDKILAFKGYPITWPKRKIKAERGIRQGDP
|
|
| ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) | 3.9e-09 | 43.55 | Show/hide |
Query: PKRKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKG--CSLNSVSVSHLLFADD
P+ + RG+RQGDP+SP++F+L + LS + + A+++G + G S NS ++HLLFADD
Subjt: PKRKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKG--CSLNSVSVSHLLFADD
|
|
