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Lag0000356 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000356
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:5027931..5028740
RNA-Seq ExpressionLag0000356
SyntenyLag0000356
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030936142.1 uncharacterized protein LOC115961277 [Quercus lobata]4.2e-3540.83Show/hide
Query:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL
        ETK+++   +RIK ++ F  G+ VP  G+SGGL LLW R+ ++ ++S+S  HID  + E+  ++ WRFT  YG+P  +L +++W L+  L D S + W  
Subjt:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL

Query:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINS
         GDFNEI    EK+GG  RS+ ++ KF++ ++ CG  D G++GP FTWCN       ++ RLDR    S
Subjt:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINS

XP_030970584.1 uncharacterized protein LOC115990959 [Quercus lobata]2.9e-3643.29Show/hide
Query:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL
        ETK+++   +RIK ++ F  G+ VP  G+SGGL LLW R+ ++ ++S+S  HID  + E+  ++ WRFTG YG+P  +L +++W L+  L   S + W  
Subjt:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL

Query:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDR
         GDFNEI    EKTGG  RS+ ++ KFR+ ++ CG  D GY+GP FTWCN       ++ RLDR
Subjt:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDR

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]9.3e-3543.41Show/hide
Query:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKD-WSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLG
        ETKL   G +  K +L F     + S G+SGGL L+W  D+ V L+S+S+ HIDV ++ +D W WRFTG+YGNP  +    TW L+  L     + W+LG
Subjt:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKD-WSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLG

Query:  GDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQSIIL
        G+FNE+    EK GG  RS T+I  FR+ +  C L D G+ GP+FTW N       I  RLDR+L NS   C  + PQ+++L
Subjt:  GDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQSIIL

XP_042939418.1 uncharacterized protein LOC122274450 [Carya illinoinensis]7.1e-3544.38Show/hide
Query:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV
        ET+L+    +++K +L F+  + V S+G+SGGL LLW  DV+++++ YSK HI   +Q+   D++ W FTGVYG P  +   ETW L+  +    D  W+
Subjt:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV

Query:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN
        L GDFNE+    EK GG  R++ +I++FRD +D CGL+D GY+G  FTWCN    Q  I  RLDR L N
Subjt:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]3.8e-3644.64Show/hide
Query:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQ--EKDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL
        ETKL     + +KR L +EC   V S+G+SGGL L+W  + N++++SYSK HID  +   E D  W+FTGVYG+P   L +ETW  +  L     V W++
Subjt:  ETKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQ--EKDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL

Query:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN
         GDFNE+    EK GG +R E ++R FR  +D C  +D G++GP FTWCN    Q  +  RLDR+L N
Subjt:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN

TrEMBL top hitse value%identityAlignment
A0A1U8L1J7 uncharacterized protein LOC1079215807.7e-3534.21Show/hide
Query:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFV--QEKDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV
        METKL R   +R++R+  +  GIEV  +G  GGL L W  +V+++L S+SK HIDVFV   EK   WRFTG YG+P      E+WA++  L  + D  W 
Subjt:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFV--QEKDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV

Query:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQSIILRDWPQTIDQSLLNGRK
        + GDFNEI   +EK GGL R +  +  FR  +  C L D GY G  FTW   ++ +  I  RLDR + N   +       ++   D+   + +S +  R+
Subjt:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQSIILRDWPQTIDQSLLNGRK

Query:  NRLIEVFEKLAVLSALKKYGQSMSNVERLL-IKCGGKILGEGTEIFWKKRSCVLVDWVNGVETNTT
         + + + +    L+ L K  +    +E L+  K       E  E +W++R+   +DW+   + NT+
Subjt:  NRLIEVFEKLAVLSALKKYGQSMSNVERLL-IKCGGKILGEGTEIFWKKRSCVLVDWVNGVETNTT

A0A2N9G656 Reverse transcriptase domain-containing protein3.8e-3443.11Show/hide
Query:  IKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKDWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLGGDFNEITDQTE
        ++ QL F   + V ++G+ GGL L W  +VN+S+RS+S  HID  +   D + WRFTG YG P  N  +E+W L+  L     + W+  GDFNEIT   E
Subjt:  IKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKDWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLGGDFNEITDQTE

Query:  KTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQ
        K G L R E ++  FR+ +D C LMD GY G  +TWCNN +    +WARLDR + +S  + K  G Q
Subjt:  KTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQ

A0A2N9H1U1 Reverse transcriptase domain-containing protein1.9e-3343.37Show/hide
Query:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQE-KDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL
        +ET L     + ++ +L+F   + V  + Q GGL L W ++ NV+++SYS  HID  + E  D +WRFTG YG P  +    +WAL+  L     + W+ 
Subjt:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQE-KDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVL

Query:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFL
         GDFNE+    EK GG  RS  +++ FRD ID CG MD GY GP FTWCNN V    +W RLDR L
Subjt:  GGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFL

A0A2N9J7Z5 Reverse transcriptase domain-containing protein3.8e-3443.11Show/hide
Query:  IKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKDWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLGGDFNEITDQTE
        ++ QL F   + V ++G+ GGL L W  +VN+S+RS+S  HID  +   D + WRFTG YG P  N  +E+W L+  L     + W+  GDFNEIT   E
Subjt:  IKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKDWS-WRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLGGDFNEITDQTE

Query:  KTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQ
        K G L R E ++  FR+ +D C LMD GY G  +TWCNN +    +WARLDR + +S  + K  G Q
Subjt:  KTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQ

A0A5B6U6G4 Reverse transcriptase3.8e-3446.15Show/hide
Query:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV
        METKL     DR++R   F  GI V ++G  GGL L W  D+ V+LRSYSK HIDV ++E+     WRFTG YG+P     K  W L+ RL    D  W+
Subjt:  METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEK--DWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWV

Query:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN
        + GDFNEI    EK GG  R    +  FRDT+  CGLMD G+ G  FTW   ++S+  I  RLDR + N
Subjt:  LGGDFNEITDQTEKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAGCTTAAAAGAAATGGTGGTGACAGGATTAAAAGACAGCTTAATTTTGAGTGTGGCATTGAGGTTCCGAGTCAAGGGCAAAGTGGTGGGCTGCTTCTTCT
TTGGTTGCGAGATGTTAATGTCTCTCTCCGCTCTTACTCCAAGGGGCACATTGATGTGTTTGTTCAGGAGAAAGACTGGTCGTGGAGGTTTACTGGGGTCTATGGCAATC
CAGTGAGAAACTTACATAAAGAAACTTGGGCTCTCATGCATCGTTTATGGGACCATTCGGATGTGTCGTGGGTCCTTGGTGGAGACTTTAACGAGATTACTGATCAAACT
GAGAAGACTGGAGGTCTGGATAGAAGTGAAACAGAGATAAGGAAATTCAGAGACACAATTGACACTTGTGGACTTATGGATCCGGGCTATGTTGGGCCAAAGTTTACATG
GTGCAATAATCATGTCAGCCAGGATATTATCTGGGCGAGGTTGGATAGGTTTCTAATCAACTCCACAATAATGTGTAAGAGAGTAGGCCCACAGTCCATCATCTTGCGAG
ATTGGCCTCAGACCATAGACCAATCCTTGCTGAATGGAAGGAAGAACCGCCTGATCGAGGTATTCGAAAAGTTGGCCGTCCTAAGCGCTTTGAAGAAGTATGGACAAAGT
ATGTCGAATGTAGAGAGATTGTTGATCAAGTGTGGAGGCAAAATACTTGGAGAGGGAACGGAGATATTTTGGAAAAAACGAAGCTGTGTCTTAGTCGACTGGGTCAATGG
AGTAGAGACCAATACGACGGATCCATTAAAGGGGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAGCTTAAAAGAAATGGTGGTGACAGGATTAAAAGACAGCTTAATTTTGAGTGTGGCATTGAGGTTCCGAGTCAAGGGCAAAGTGGTGGGCTGCTTCTTCT
TTGGTTGCGAGATGTTAATGTCTCTCTCCGCTCTTACTCCAAGGGGCACATTGATGTGTTTGTTCAGGAGAAAGACTGGTCGTGGAGGTTTACTGGGGTCTATGGCAATC
CAGTGAGAAACTTACATAAAGAAACTTGGGCTCTCATGCATCGTTTATGGGACCATTCGGATGTGTCGTGGGTCCTTGGTGGAGACTTTAACGAGATTACTGATCAAACT
GAGAAGACTGGAGGTCTGGATAGAAGTGAAACAGAGATAAGGAAATTCAGAGACACAATTGACACTTGTGGACTTATGGATCCGGGCTATGTTGGGCCAAAGTTTACATG
GTGCAATAATCATGTCAGCCAGGATATTATCTGGGCGAGGTTGGATAGGTTTCTAATCAACTCCACAATAATGTGTAAGAGAGTAGGCCCACAGTCCATCATCTTGCGAG
ATTGGCCTCAGACCATAGACCAATCCTTGCTGAATGGAAGGAAGAACCGCCTGATCGAGGTATTCGAAAAGTTGGCCGTCCTAAGCGCTTTGAAGAAGTATGGACAAAGT
ATGTCGAATGTAGAGAGATTGTTGATCAAGTGTGGAGGCAAAATACTTGGAGAGGGAACGGAGATATTTTGGAAAAAACGAAGCTGTGTCTTAGTCGACTGGGTCAATGG
AGTAGAGACCAATACGACGGATCCATTAAAGGGGCTATAG
Protein sequenceShow/hide protein sequence
METKLKRNGGDRIKRQLNFECGIEVPSQGQSGGLLLLWLRDVNVSLRSYSKGHIDVFVQEKDWSWRFTGVYGNPVRNLHKETWALMHRLWDHSDVSWVLGGDFNEITDQT
EKTGGLDRSETEIRKFRDTIDTCGLMDPGYVGPKFTWCNNHVSQDIIWARLDRFLINSTIMCKRVGPQSIILRDWPQTIDQSLLNGRKNRLIEVFEKLAVLSALKKYGQS
MSNVERLLIKCGGKILGEGTEIFWKKRSCVLVDWVNGVETNTTDPLKGL