; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:5028839..5030236
RNA-Seq ExpressionLag0000357
SyntenyLag0000357
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG71426.1 hypothetical protein EZV62_000005 [Acer yangbiense]1.4e-3034.03Show/hide
Query:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE
        F   + ++W+    V I+ V FNIF+ KF N + +  I + GPW+++K++++ E+P+   S   ++F  V LW   H +P  C +++ A+ +   +G+V 
Subjt:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE

Query:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGP----KDGELKYGAWLR
         +++  + +  WG  L++K+QID+   LKR + LK D   D   + + YE+LP+FCY CG +GH  KEC DV       K    K+G+W+R
Subjt:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGP----KDGELKYGAWLR

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]1.2e-2933.69Show/hide
Query:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE
        F S + ++W     V I+ +G N F+ KF     K  +L  GPW +D+A+L+  EPK         F + + W     +P AC  ++  + +G ++G VE
Subjt:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE

Query:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLR
        +++  ++ E   G   RI++ I++ + LK+ +FLK + + D + +PV YE+LPDFCY CG +GH  KEC    G +  +L YG W++
Subjt:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLR

XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]2.4e-3038.5Show/hide
Query:  MPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDV
        M ++W     V I+K+G N+F+ KF +   K  IL  GPW +D+A+++  EP          F  VSLW   H +P  C S++ A  +G ++GKVE+VD 
Subjt:  MPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDV

Query:  QDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSK-GDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLREPT
         D  E   G  LR++I +D+   LK+ I L+ D +  +D  + V YE+LPDFC+ CG +GH  +EC   +     EL YG WLR  T
Subjt:  QDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSK-GDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLREPT

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.8e-3140.12Show/hide
Query:  IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSL
        +D +GFNIF+  F  +  +  IL  GPW +D+A+++ + P +     DM+FR VSLW HF  L  AC ++  A  +GN +G  E V+   +    WG  L
Subjt:  IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSL

Query:  RIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED-VLGPKDGELKYGAWLR
        R++++ DV   L RGI L  D      WIP+ YE+LPDF Y CG L H +K+C D  +      L+YG WLR
Subjt:  RIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED-VLGPKDGELKYGAWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.4e-3239.29Show/hide
Query:  SKMPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKV
        S M  +W     T  + +G NI+V  FK+   K  +L SGPW ++K++L+   P A     DM F + + W   H +P+ C S + A  +G  LG VE  
Subjt:  SKMPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKV

Query:  DVQDDVEPSW-GCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED---VLGPKDGELKYGAWLREPTKMWGSEGS
        +++ D    W G  +R++++IDV   L+RGI LK +S G D W P+ YEKLPDFCY CG +GH+ +ECE    V+     E +YG WLR  T +  S   
Subjt:  DVQDDVEPSW-GCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED---VLGPKDGELKYGAWLREPTKMWGSEGS

Query:  PSGRNVFGR----GRGNSWSGGRG
        P    VF R    GRG+  +GGRG
Subjt:  PSGRNVFGR----GRGNSWSGGRG

TrEMBL top hitse value%identityAlignment
A0A2I4F5K7 uncharacterized protein At4g02000-like5.8e-3037.5Show/hide
Query:  MPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDV
        M KIW   +     +V  N+FV  F+N + K  +    PW +D  +L+  E +  +    ++F Y S W   H LP +C +++    IG+ +GKVEKVDV
Subjt:  MPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDV

Query:  QDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDG-ELKYGAWLR
        QDD    WGC LR+ I +++   L RG  LK   KG+  W+P +YEK+P  C+ CGC+ H    C  VL   +  E +YG W+R
Subjt:  QDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDG-ELKYGAWLR

A0A5C7ISG5 CCHC-type domain-containing protein6.8e-3134.03Show/hide
Query:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE
        F   + ++W+    V I+ V FNIF+ KF N + +  I + GPW+++K++++ E+P+   S   ++F  V LW   H +P  C +++ A+ +   +G+V 
Subjt:  FSSKMPKIWNQEHTV-IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVE

Query:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGP----KDGELKYGAWLR
         +++  + +  WG  L++K+QID+   LKR + LK D   D   + + YE+LP+FCY CG +GH  KEC DV       K    K+G+W+R
Subjt:  KVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGP----KDGELKYGAWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-3140.12Show/hide
Query:  IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSL
        +D +GFNIF+  F  +  +  IL  GPW +D+A+++ + P +     DM+FR VSLW HF  L  AC ++  A  +GN +G  E V+   +    WG  L
Subjt:  IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSL

Query:  RIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED-VLGPKDGELKYGAWLR
        R++++ DV   L RGI L  D      WIP+ YE+LPDF Y CG L H +K+C D  +      L+YG WLR
Subjt:  RIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED-VLGPKDGELKYGAWLR

A0A6J1D765 uncharacterized protein LOC1110179022.1e-3239.29Show/hide
Query:  SKMPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKV
        S M  +W     T  + +G NI+V  FK+   K  +L SGPW ++K++L+   P A     DM F + + W   H +P+ C S + A  +G  LG VE  
Subjt:  SKMPKIWN-QEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKV

Query:  DVQDDVEPSW-GCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED---VLGPKDGELKYGAWLREPTKMWGSEGS
        +++ D    W G  +R++++IDV   L+RGI LK +S G D W P+ YEKLPDFCY CG +GH+ +ECE    V+     E +YG WLR  T +  S   
Subjt:  DVQDDVEPSW-GCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECED---VLGPKDGELKYGAWLREPTKMWGSEGS

Query:  PSGRNVFGR----GRGNSWSGGRG
        P    VF R    GRG+  +GGRG
Subjt:  PSGRNVFGR----GRGNSWSGGRG

A0A6J1DX30 uncharacterized protein LOC1110248741.7e-2933.86Show/hide
Query:  MFSSKMPKIWNQEHTV--IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGK
        +  + M   W  E+    +  +G+N+F+  F  A  +  I +SGPW +D+ ++L  +P A +   +++F  + +W  F  LP  C +R  A  +GN LG 
Subjt:  MFSSKMPKIWNQEHTV--IDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGK

Query:  VEKVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLR
         E+ D  DD+ P WG +LR+++ +D+   L+RGI L  D      WIP+ YE+LPDFCY CG            L     + +YG+WLR
Subjt:  VEKVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding2.8e-0521.97Show/hide
Query:  ILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSD
        IL  GPW ++  M + +  +    + D EF+ +  W     +P    + +    IG                                   + G+FL+++
Subjt:  ILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEPSWGCSLRIKIQIDVHISLKRGIFLKSD

Query:  SKGDDKWIPVTYEKLPDFCYGCGCLGHTIKEC
           D   +   YEKL +FC  CG L H   EC
Subjt:  SKGDDKWIPVTYEKLPDFCYGCGCLGHTIKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGTTCAAAGATGCCAAAGATATGGAACCAAGAGCATACGGTTATCGATAAGGTGGGATTTAATATATTTGTTTGCAAGTTCAAGAACGCGAAGATCAAAGGTTG
GATCTTAGAGTCCGGACCATGGTTCTATGATAAAGCTATGCTTTTATTCGAGGAGCCTAAGGCGGGTGTCAGCTACGATGACATGGAATTCAGGTATGTTTCTCTTTGGA
CTCATTTTCATAAGTTACCGTATGCTTGTTTTTCTAGGAAAGCAGCAGAAGGCATTGGAAATCTATTGGGAAAGGTGGAAAAAGTGGACGTACAAGATGATGTAGAACCA
TCATGGGGATGTTCTTTGAGAATCAAAATTCAAATTGATGTGCATATTTCGCTGAAGAGAGGTATTTTTCTGAAATCTGATAGTAAAGGAGATGATAAGTGGATACCGGT
TACGTACGAAAAGTTGCCGGATTTCTGTTATGGTTGTGGGTGTTTGGGTCATACGATTAAAGAGTGTGAAGATGTTTTGGGGCCAAAAGACGGTGAACTAAAGTACGGTG
CATGGTTAAGGGAACCGACCAAAATGTGGGGGTCTGAAGGCAGTCCCTCGGGTAGGAATGTTTTCGGCCGTGGAAGGGGAAACTCATGGAGTGGGGGTAGAGGAAGGGGA
AGGATAGAGTACTACGATAGTAAAGATGAAGAGGATAAGGAAAAGTTGCCAACCACTCACGATATGAGGGCTGAATGTTCAGTCCCACCGGCGGCGGCAACAACCTCACC
GGCGGCAACAACCTCACTGGCGGCAAGCTCAATCCCAACGGAGACCAAGGTTCAGACGCTCCAAAAGGAAAGTGTAACGGCTGGAAACATTGATATGGAATTAGAAACGC
CTTTGGAAAGTGAAGGAACGGTAAAGGAAAGAATTAATGGGGAAAAAATCATTATGGGTTTGAACGACAATAAAGAAGGGCAGGATTTATTGAATCTTAATGCTGAGAAG
GAGAAGTTACCAAATGTGAATGCTGAATTAATTGCAAACAATCAATATGGAAAGGTGACGGATACTCAGTCAATGGAGTTTGAAATTTTACTTCAAGAATTGATAAGGGA
AGAAATTGTTGCTCAGAATGTTCAAACATCCGATTCTGGACTGGTGAGTGAACCTTTAAATACAGATGCTATTAAGATGAAGGAGGCCATAAAAATTAAAAAGTGGAAGA
GAGTTGCAAGGGAGAAACAGAAGTTGGAAACGTATATTCAAGAATATCAGTCTATTAGTGGGACAAAACATAGAACTGAGATGGATTTGGTACAATTAGAACCAAGCAAG
AGAAGAGTGGTGGTAGTGGAAAACGAATCAATTGCGCGATCGGTGGAGGCTGCAAGACAGCCCCACCGGGCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGTTCAAAGATGCCAAAGATATGGAACCAAGAGCATACGGTTATCGATAAGGTGGGATTTAATATATTTGTTTGCAAGTTCAAGAACGCGAAGATCAAAGGTTG
GATCTTAGAGTCCGGACCATGGTTCTATGATAAAGCTATGCTTTTATTCGAGGAGCCTAAGGCGGGTGTCAGCTACGATGACATGGAATTCAGGTATGTTTCTCTTTGGA
CTCATTTTCATAAGTTACCGTATGCTTGTTTTTCTAGGAAAGCAGCAGAAGGCATTGGAAATCTATTGGGAAAGGTGGAAAAAGTGGACGTACAAGATGATGTAGAACCA
TCATGGGGATGTTCTTTGAGAATCAAAATTCAAATTGATGTGCATATTTCGCTGAAGAGAGGTATTTTTCTGAAATCTGATAGTAAAGGAGATGATAAGTGGATACCGGT
TACGTACGAAAAGTTGCCGGATTTCTGTTATGGTTGTGGGTGTTTGGGTCATACGATTAAAGAGTGTGAAGATGTTTTGGGGCCAAAAGACGGTGAACTAAAGTACGGTG
CATGGTTAAGGGAACCGACCAAAATGTGGGGGTCTGAAGGCAGTCCCTCGGGTAGGAATGTTTTCGGCCGTGGAAGGGGAAACTCATGGAGTGGGGGTAGAGGAAGGGGA
AGGATAGAGTACTACGATAGTAAAGATGAAGAGGATAAGGAAAAGTTGCCAACCACTCACGATATGAGGGCTGAATGTTCAGTCCCACCGGCGGCGGCAACAACCTCACC
GGCGGCAACAACCTCACTGGCGGCAAGCTCAATCCCAACGGAGACCAAGGTTCAGACGCTCCAAAAGGAAAGTGTAACGGCTGGAAACATTGATATGGAATTAGAAACGC
CTTTGGAAAGTGAAGGAACGGTAAAGGAAAGAATTAATGGGGAAAAAATCATTATGGGTTTGAACGACAATAAAGAAGGGCAGGATTTATTGAATCTTAATGCTGAGAAG
GAGAAGTTACCAAATGTGAATGCTGAATTAATTGCAAACAATCAATATGGAAAGGTGACGGATACTCAGTCAATGGAGTTTGAAATTTTACTTCAAGAATTGATAAGGGA
AGAAATTGTTGCTCAGAATGTTCAAACATCCGATTCTGGACTGGTGAGTGAACCTTTAAATACAGATGCTATTAAGATGAAGGAGGCCATAAAAATTAAAAAGTGGAAGA
GAGTTGCAAGGGAGAAACAGAAGTTGGAAACGTATATTCAAGAATATCAGTCTATTAGTGGGACAAAACATAGAACTGAGATGGATTTGGTACAATTAGAACCAAGCAAG
AGAAGAGTGGTGGTAGTGGAAAACGAATCAATTGCGCGATCGGTGGAGGCTGCAAGACAGCCCCACCGGGCACAATGA
Protein sequenceShow/hide protein sequence
MFSSKMPKIWNQEHTVIDKVGFNIFVCKFKNAKIKGWILESGPWFYDKAMLLFEEPKAGVSYDDMEFRYVSLWTHFHKLPYACFSRKAAEGIGNLLGKVEKVDVQDDVEP
SWGCSLRIKIQIDVHISLKRGIFLKSDSKGDDKWIPVTYEKLPDFCYGCGCLGHTIKECEDVLGPKDGELKYGAWLREPTKMWGSEGSPSGRNVFGRGRGNSWSGGRGRG
RIEYYDSKDEEDKEKLPTTHDMRAECSVPPAAATTSPAATTSLAASSIPTETKVQTLQKESVTAGNIDMELETPLESEGTVKERINGEKIIMGLNDNKEGQDLLNLNAEK
EKLPNVNAELIANNQYGKVTDTQSMEFEILLQELIREEIVAQNVQTSDSGLVSEPLNTDAIKMKEAIKIKKWKRVAREKQKLETYIQEYQSISGTKHRTEMDLVQLEPSK
RRVVVVENESIARSVEAARQPHRAQ