; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000365 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000365
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr4:5134880..5137559
RNA-Seq ExpressionLag0000365
SyntenyLag0000365
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-14861.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR +Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-14861.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-14861.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-14861.72Show/hide
Query:  VGKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSS
        +GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSS
Subjt:  VGKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSS

Query:  QKAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATM
        QK ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATM
Subjt:  QKAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATM

Query:  HLADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE
        HL+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE
Subjt:  HLADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE

Query:  -RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF-----------
         RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI            
Subjt:  -RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF-----------

Query:  -----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                         +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  -----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

TYK25585.1 uncharacterized protein E5676_scaffold352G007440 [Cucumis melo var. makuwa]8.4e-14961.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase5.3e-14961.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR +Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

A0A5D3BRZ6 Reverse transcriptase7.0e-14961.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

A0A5D3BYE6 Reverse transcriptase5.3e-14961.72Show/hide
Query:  VGKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSS
        +GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSS
Subjt:  VGKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSS

Query:  QKAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATM
        QK ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATM
Subjt:  QKAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATM

Query:  HLADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE
        HL+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE
Subjt:  HLADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE

Query:  -RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF-----------
         RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI            
Subjt:  -RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF-----------

Query:  -----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                         +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  -----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

A0A5D3C4R1 Reverse transcriptase7.0e-14961.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

A0A5D3DQ20 Retrotrans_gag domain-containing protein4.1e-14961.85Show/hide
Query:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ
        GK  +  LVE+EEQ+ YL+EV D+IR++ES+L+EIS K N +DAV G V+G PIQELM RV+ LE+     R  +YE GDSS+G  A +EERV  LDSSQ
Subjt:  GKDPRGTLVEIEEQLFYLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKAT--RPSSYECGDSSSGYAALMEERVNGLDSSQ

Query:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH
        K ++ M+  +S++ +A LDVVR E+AD++A L+LTMRA+ NQ  AGGA+  ++VK+PEPKPFCG RDAKA+E++IFDLEQYFRATNT+TEE+K+TLATMH
Subjt:  KAIVLMVTNLSDNVKAALDVVRAEVADLSAILNLTMRAVGNQT-AGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMH

Query:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-
        L+++AKLWWRSRF+DIQ+GRCTID W+  K+ELRSQFFPENVE+LAR KLRELKHT +IR+YVKQF+GLMLDIRDMSEKDKVFCFVEGLKPWAK+KLYE 
Subjt:  LADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFPENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYE-

Query:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------
        RVQDL++AYAA ERLFDLSND SQD R + + + GG+RNNRP SPK+  GD++  GDRR  Q   GNSWRG   Q N   RP+SCFI             
Subjt:  RVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVGDKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIF------------

Query:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD
                        +    E E  Q E  +NPRMGALKFLS LQKKVGET   +ERGLMYVD
Subjt:  ----------------EMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTACTATCTGTCACATCTATTTTACCGTCTTCGGGGGAATCTTCACCTTCATTTGTTTCTGGATTTCGTCACCCTCGGATGAATAGGGAATTGTTTGAGGTGTC
TACCTTACTTTTGCTCTTGAGGGACGTTCATGTTCATAAGGGGAGAAGGGATCTTCGCACTTGGACCCCTTGTTCATCTCCGAGTTTCTCCTCTAGCTCTTTGTTCCACA
TCCTGTTTGTTTCTTTGCTCCCTCTAAGTCATCTCTTTGTTTTCCTCATTCTGGAAGGAGTTGGCAAAGACCCACGTGGAACGTTGGTAGAGATTGAAGAGCAATTGTTC
TACTTGATGGAAGTCCTTGACGCTATTCGGTTCGTGGAATCTCAGTTGGATGAGATTTCTACCAAAGCCAACAAAGTTGATGCAGTAGTTGGCTGCGTGGATGGAATGCC
CATCCAAGAATTGATGATGAGGGTCGAGAACCTTGAAAGTAAAGCTACTCGACCTAGTAGCTATGAGTGTGGTGATAGCTCATCGGGCTATGCAGCCCTGATGGAGGAGC
GCGTCAATGGTTTGGACAGCTCCCAGAAAGCGATAGTCCTGATGGTTACAAACTTATCAGACAATGTGAAAGCTGCACTTGATGTGGTCAGGGCCGAAGTGGCGGATCTG
AGCGCCATACTAAACCTCACGATGAGAGCAGTGGGGAACCAAACGGCAGGGGGTGCAGTCCAGTTCAACAAGGTTAAGGTACCTGAGCCTAAGCCCTTCTGTGGGGTTCG
AGATGCAAAGGCTATTGAGAGCTTCATTTTTGATCTTGAACAATACTTTCGAGCTACAAATACTATGACAGAAGAGTCGAAGATAACATTGGCTACAATGCATCTTGCAG
ACAATGCAAAGTTGTGGTGGAGGTCCCGATTCATGGACATCCAAGATGGTCGTTGTACCATAGACATTTGGGAAAGACAGAAACAAGAACTTCGTTCTCAATTTTTCCCC
GAGAATGTAGAAGTTTTGGCAAGATGGAAGTTGAGAGAGCTCAAACATACATGCAACATTCGGGATTATGTGAAACAGTTCTCTGGATTAATGTTAGACATTCGTGATAT
GTCGGAGAAAGACAAAGTTTTCTGTTTTGTCGAAGGATTGAAGCCATGGGCGAAATCCAAGTTATATGAACGAGTGCAAGATCTTTCGACCGCCTATGCAGCGACGGAGC
GATTGTTTGATCTCAGTAATGATCTGTCCCAAGATGTGAGGTGGAATAAAGCTCCCACTGATGGAGGAAACAGAAACAATCGTCCAGGCTCCCCCAAAAGTGGAGTAGGA
GATAAACAAGGAGGGGGAGACCGTAGACCCTTCCAGCAGAGAGGTGGAAATTCGTGGCGAGGGCCATACCAACAAAACAACTACTACCAGAGGCCCATTTCGTGCTTCAT
ATTTGAAATGGAAGTCGTGGAAACCGAGACACCGCAAGTTGAAGCTAAGAACAACCCTCGAATGGGGGCGCTGAAATTCCTATCTGTCCTCCAGAAGAAAGTGGGGGAGA
CCAAGGAGCAATTAGAAAGAGGGCTCATGTACGTTGATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTACTATCTGTCACATCTATTTTACCGTCTTCGGGGGAATCTTCACCTTCATTTGTTTCTGGATTTCGTCACCCTCGGATGAATAGGGAATTGTTTGAGGTGTC
TACCTTACTTTTGCTCTTGAGGGACGTTCATGTTCATAAGGGGAGAAGGGATCTTCGCACTTGGACCCCTTGTTCATCTCCGAGTTTCTCCTCTAGCTCTTTGTTCCACA
TCCTGTTTGTTTCTTTGCTCCCTCTAAGTCATCTCTTTGTTTTCCTCATTCTGGAAGGAGTTGGCAAAGACCCACGTGGAACGTTGGTAGAGATTGAAGAGCAATTGTTC
TACTTGATGGAAGTCCTTGACGCTATTCGGTTCGTGGAATCTCAGTTGGATGAGATTTCTACCAAAGCCAACAAAGTTGATGCAGTAGTTGGCTGCGTGGATGGAATGCC
CATCCAAGAATTGATGATGAGGGTCGAGAACCTTGAAAGTAAAGCTACTCGACCTAGTAGCTATGAGTGTGGTGATAGCTCATCGGGCTATGCAGCCCTGATGGAGGAGC
GCGTCAATGGTTTGGACAGCTCCCAGAAAGCGATAGTCCTGATGGTTACAAACTTATCAGACAATGTGAAAGCTGCACTTGATGTGGTCAGGGCCGAAGTGGCGGATCTG
AGCGCCATACTAAACCTCACGATGAGAGCAGTGGGGAACCAAACGGCAGGGGGTGCAGTCCAGTTCAACAAGGTTAAGGTACCTGAGCCTAAGCCCTTCTGTGGGGTTCG
AGATGCAAAGGCTATTGAGAGCTTCATTTTTGATCTTGAACAATACTTTCGAGCTACAAATACTATGACAGAAGAGTCGAAGATAACATTGGCTACAATGCATCTTGCAG
ACAATGCAAAGTTGTGGTGGAGGTCCCGATTCATGGACATCCAAGATGGTCGTTGTACCATAGACATTTGGGAAAGACAGAAACAAGAACTTCGTTCTCAATTTTTCCCC
GAGAATGTAGAAGTTTTGGCAAGATGGAAGTTGAGAGAGCTCAAACATACATGCAACATTCGGGATTATGTGAAACAGTTCTCTGGATTAATGTTAGACATTCGTGATAT
GTCGGAGAAAGACAAAGTTTTCTGTTTTGTCGAAGGATTGAAGCCATGGGCGAAATCCAAGTTATATGAACGAGTGCAAGATCTTTCGACCGCCTATGCAGCGACGGAGC
GATTGTTTGATCTCAGTAATGATCTGTCCCAAGATGTGAGGTGGAATAAAGCTCCCACTGATGGAGGAAACAGAAACAATCGTCCAGGCTCCCCCAAAAGTGGAGTAGGA
GATAAACAAGGAGGGGGAGACCGTAGACCCTTCCAGCAGAGAGGTGGAAATTCGTGGCGAGGGCCATACCAACAAAACAACTACTACCAGAGGCCCATTTCGTGCTTCAT
ATTTGAAATGGAAGTCGTGGAAACCGAGACACCGCAAGTTGAAGCTAAGAACAACCCTCGAATGGGGGCGCTGAAATTCCTATCTGTCCTCCAGAAGAAAGTGGGGGAGA
CCAAGGAGCAATTAGAAAGAGGGCTCATGTACGTTGATGCATGA
Protein sequenceShow/hide protein sequence
MILLSVTSILPSSGESSPSFVSGFRHPRMNRELFEVSTLLLLLRDVHVHKGRRDLRTWTPCSSPSFSSSSLFHILFVSLLPLSHLFVFLILEGVGKDPRGTLVEIEEQLF
YLMEVLDAIRFVESQLDEISTKANKVDAVVGCVDGMPIQELMMRVENLESKATRPSSYECGDSSSGYAALMEERVNGLDSSQKAIVLMVTNLSDNVKAALDVVRAEVADL
SAILNLTMRAVGNQTAGGAVQFNKVKVPEPKPFCGVRDAKAIESFIFDLEQYFRATNTMTEESKITLATMHLADNAKLWWRSRFMDIQDGRCTIDIWERQKQELRSQFFP
ENVEVLARWKLRELKHTCNIRDYVKQFSGLMLDIRDMSEKDKVFCFVEGLKPWAKSKLYERVQDLSTAYAATERLFDLSNDLSQDVRWNKAPTDGGNRNNRPGSPKSGVG
DKQGGGDRRPFQQRGGNSWRGPYQQNNYYQRPISCFIFEMEVVETETPQVEAKNNPRMGALKFLSVLQKKVGETKEQLERGLMYVDA