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Lag0000366 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000366
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:5141821..5142135
RNA-Seq ExpressionLag0000366
SyntenyLag0000366
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028494.1 LINE-1 retrotransposable element ORF2 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1351.61Show/hide
Query:  KAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDER--NPISTDQRATLESPFTKLK
        K+KW  EGDANTAF HL+V     +G+IVEILS    +L N N IE+E I FY+KL+TKKD R   +++D R  +PI+ +QR  LE+PFT+++
Subjt:  KAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDER--NPISTDQRATLESPFTKLK

KAG9458388.1 hypothetical protein H6P81_002896 [Aristolochia fimbriata]1.3e-0838.71Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPFT
        W+QR + KW  EGD NT FFH + +A+RRK  I   L+  G  +TN + I   F  F+  LYT++D   P+ +      +S   R  L  PFT
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPFT

XP_019242559.1 PREDICTED: uncharacterized protein LOC109222690, partial [Nicotiana attenuata]9.8e-0939.13Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF
        WRQR +A W  EGD NT FFH    A+RR  +I +++   G SL    DI++E I +Y+KLYT+++   P         I+ +    L+SPF
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]2.6e-0959.65Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAF
        WRQRCK KW  EGD NT FFH  +A  RR+  I EILS  G  LT   DIE+EFI F
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAF

XP_035546536.1 uncharacterized protein LOC118348603 [Juglans regia]5.8e-0941.77Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNP
        WRQR K +W  EGD NT FFH   +  R+K  I ++ S LG  LTN NDI  EF + ++ L+T  +   P S+++   P
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNP

TrEMBL top hitse value%identityAlignment
A0A1J6IBX8 Protein DETOXIFICATION1.1e-0839.13Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF
        WRQR +A W  EGD NT FFH     ++R  +I ++L   G ++ N  DI+KE + FYQ LYT+ +   P   + E   IS +    L S F
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein1.4e-0837.63Show/hide
Query:  MWRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF
        +W QR + +W + GD N AFFH +   N+RK  I  I    G SL +  DI + FI+ +Q +YTK++    L      NPIS   ++ L  PF
Subjt:  MWRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPF

A0A6J1E2G6 uncharacterized protein LOC1110254051.3e-0959.65Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAF
        WRQRCK KW  EGD NT FFH  +A  RR+  I EILS  G  LT   DIE+EFI F
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAF

A0A6P9EGR3 uncharacterized protein LOC1183486032.8e-0941.77Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNP
        WRQR K +W  EGD NT FFH   +  R+K  I ++ S LG  LTN NDI  EF + ++ L+T  +   P S+++   P
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNP

A5CAA2 Reverse transcriptase domain-containing protein1.4e-0834.04Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPFTK
        WRQ+ + KW  EGD N+ FFH +    R +  I E+ +  G  + N   I++E + +++KLYT     +      + +PIS +    LESPFT+
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPFTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.4e-0532.79Show/hide
Query:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKL
        +RQ+ + KW  +GDANT FFH ++ AN+ K  I  +       + N   +++  +A+Y  L
Subjt:  WRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGCCAAAGGTGCAAGGCAAAATGGTTTGTTGAGGGTGATGCCAATACAGCCTTTTTCCACCTTATAGTGGCTGCAAATAGAAGAAAAGGCTCCATTGTGGAGAT
TTTATCCGGCTTAGGTAACAGCCTCACAAATGATAATGACATAGAAAAAGAATTTATAGCCTTTTACCAAAAGCTCTACACTAAAAAAGACAGCAGAAATCCATTGTCGA
TTATTGATGAACGGAATCCTATATCTACGGACCAGAGAGCAACTTTAGAATCTCCCTTCACAAAGCTGAAATTTACAAGGCAGAATAGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGCCAAAGGTGCAAGGCAAAATGGTTTGTTGAGGGTGATGCCAATACAGCCTTTTTCCACCTTATAGTGGCTGCAAATAGAAGAAAAGGCTCCATTGTGGAGAT
TTTATCCGGCTTAGGTAACAGCCTCACAAATGATAATGACATAGAAAAAGAATTTATAGCCTTTTACCAAAAGCTCTACACTAAAAAAGACAGCAGAAATCCATTGTCGA
TTATTGATGAACGGAATCCTATATCTACGGACCAGAGAGCAACTTTAGAATCTCCCTTCACAAAGCTGAAATTTACAAGGCAGAATAGGATTTAG
Protein sequenceShow/hide protein sequence
MWRQRCKAKWFVEGDANTAFFHLIVAANRRKGSIVEILSGLGNSLTNDNDIEKEFIAFYQKLYTKKDSRNPLSIIDERNPISTDQRATLESPFTKLKFTRQNRI